Oryx dammah (scimitar-horned oryx): 120863532
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Entry
120863532 CDS
T07255
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120863532 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oda01009
]
120863532 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oda04515
]
120863532 (PCDH1)
Protein phosphatases and associated proteins [BR:
oda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120863532 (PCDH1)
Cell adhesion molecules [BR:
oda04515
]
Cadherins
Protocadherins
120863532 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120863532
NCBI-ProteinID:
XP_040095784
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDCRARGRRCPESALLILEPAPMGPLRHSPGPGERRLLLPTLLLALLLLLAPSPGHATRV
VYKVAEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN
TNIGSLFSIPVASDRDAGPNGVASYELQVGPEAQELFGLQVAEDQEGKQPQLIVMGNLDR
ERLDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVAEVTASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN
TSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSSKVSKGNKSKGKKSKSPKPVKPVEDEDETGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQELPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggactgcagggcccgcggccggcgctgcccagagtcggccctcctgattctggagcct
gccccaatggggcccctgaggcacagcccaggccccggggagcgacgtctgctgctgccc
accctgctgctagcactgctgctgctgctggctccgtccccgggccatgccactcgggtg
gtgtacaaggtggctgaggaacagccacccaataccctcatcgggagccttgccgctgac
tacggttttcccgacgtgggccacctgtacaaactagaggtgggcgccccgtacctgcgg
gtggatggcaagacgggcgacatctttaccaccgagacctctattgaccgtgaggggctc
cgtgaatgccagaaccagctccctggtgagccctgcatcctggagtttgaggtgtctatc
acggaccttgtgcagaatggcagcccccggctgctggagggccagatagaggttcaggac
atcaatgacaacacgcccaacttcgcctcaccagtcatcacactgcccatccccgagaac
accaatatcggctcactcttctccatcccagtggcttcggaccgagatgctggccccaac
ggtgtggcgtcatatgagctgcaggtggggcccgaggcccaggagctatttgggctgcag
gtggcagaggaccaggaggggaagcagccgcaactcatcgtgatgggcaacctggaccgg
gaacgcctggactcttacgacctcaccatcaaggtgcaggatggtggcaaccccccacgt
gccagcagtgccctgcttcgggtcaccgtgctcgacaccaatgacaacgcccccaagttc
gagcggccgtcctatgaggctgagctgtctgagaacagccccataggccactcagtcatc
caggtgaaggccaacgactcagaccaaggtgccaacgcagagatcgactacactttccac
caggcgcctgaagtcgtgagacgccttctgcgactggacaggaacaccggacttatcact
gtgcagggccccgtggaccgtgaggacctgagcaccctgcgtttctcggtgcttgccaag
gaccgtggcaccaaccccaagagtgcccgagcccaggtggtggtgactgtgaaggacatg
aacgacaatgcgcccaccatcgagatccgtggcatagggctggtgacacaccaggacggg
atggccaacatctcagaggatgtggcggaagagacagctgtggccctggtgcaggtatct
gacagagacgagggagagaacgcggctgtcacctgtgtggtagcaggcgatgtgcccttc
caactccgccaggccagcgagacgggaagcgacagcaagaagaagtacttcctgcaaacc
accaccccgctcgactatgagaaggtcaaagactacaccatcgagattgtggccgtggac
tcgggcaacccgccactctccagcaccaattccctcaaggtgcaggtggtggacgtcaat
gacaatgcgcctgtcttcacccagagcgtcactgaggtcgctttcccagaaaacaacaag
ccgggtgaagtggttgccgaggtcactgccagtgacgccgactcgggctccaatgctgag
ctggtttactctctggagcctgagccagctgccaagggcctcttcaccatctcacctgaa
actggagagatccgggtgaagacatccctggatagggaacagagggaaagctatgagttg
aaggtggtggcagccgaccggggcagccctagtctccagggcacagccactgtccttgtc
aacgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctcg
gtgatggagaacatgccggcactgagtccggtgggcatggtgactgtcattgatggggac
aagggggagaacgcacgggtgcagctcacggtggagcaggacaatggtgactttgttatc
cagaacggcacgggcaccatactctccagcctgagctttgatcgggagcagcaaagcacc
tataccttccaactgaaagctgtggacggtggtgtcccacctcgctcagcttacgttggt
gtcaccatcaacgtgctggatgagaatgacaacgcaccttttatcactgccccttccaac
acctcccaccggctgctgaccccccagacccgtctgggtgagacggtcagccaggtgaca
gctgaggacattgactctggtgtcaatgctgagctgacctacagcatcgctggtggcaac
ccttatggacttttccagattgggtcacattctggtgccatcaccctggagaaggagatt
gagcgccgccaccatgggctgcaccgcttagtcgtgaaggtcagtgaccgcggcaagccc
ccacgctacggcacagccttggtccacctatatgtcaatgagactctggccaaccgcaca
ctgctggagaccctactgggccacagcttggacacgccactggacatcgacatcgccggg
gacccagaatacgagcgctccaagcagcgtggcaacatcctctttggcgtggtggctggt
gtcgtggccgtggccttgctcatcgccctggctgtgctcgtgcgctactgccggcaacgg
gaggccaagagtggctaccaggctggcaagaaggagaccaaggacctgtacgcccccaag
cccagcagcaaagtttccaagggcaacaaaagcaagggcaagaagagcaagtctcccaag
cccgtgaaaccagtggaggatgaggatgagaccggcctgcagaagtctctcaagttcaac
ctgatgagcgacgcccccggggacagtccgcgcatccacctgcccctcaactacccacca
ggcagccctgacctgggtcgccactatcgttctaattccccactgccttccatccagttg
cagccccagtcgccctctgcctccaagaagcaccaggtggtgcaggaactgccgcctgca
aacacattcgtgggcaccggggacacgacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcacc
ttctccgccaccagccaggcccaggagctgcaggacccatcccagcatagttactacgat
agtggcctggaggagtccgagacgccatccagcaagtcgtcgtcagggccccgactgggt
cccctggctctgcctgaggatcactatgagcgcaccacccctgatggcagcataggagag
atggagcaccccgagaacgacctgcgccctctgcctgatgtcgccatgacgggcacctgt
acccgcgagtgcagcgagtttggccactccgacacgtgctggatgccaggccagtcgtct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcccgcgggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttcccg
cctgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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