Oryx dammah (scimitar-horned oryx): 120863648
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Entry
120863648 CDS
T07255
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120863648 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oda03041
]
120863648 (DDX46)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120863648 (DDX46)
Spliceosome [BR:
oda03041
]
Complex A
U2 snRNP components
U2 related factors
120863648 (DDX46)
Complex B
120863648 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
120863648
NCBI-ProteinID:
XP_040096011
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggagtcacgccactatcggaagcgatcagcatcacggggacgctctggaagt
cgatctagaagtcgttcaccctcagacaaaagaagtaaacgtggagatgatagacggtct
agaagcagggatagagacaggaggagagagaggtctcgtagcagggataaaagaagatct
cggtcaagagacaggaagcgtctgaggcgttccagaagtagagagagagagagaagtcga
gaacgaagaagatctcgaagtcgggacaggagacgttcaaggagtagaagccgaggccga
agatcccggtcttccagtcctggcaataaaagcaagaaagctgagaataggtctagatcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaa
gaggatgaaaaagaaaaggatgctggtaactttgaccagaataagctagaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagaacaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaatcgaagagatgaaacaagggaaaaagtggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctgggccaacg
gtcacaaaagttgtcacagttgtcacaaccaaaaaagcagtcgtagattctgataagaag
aaaggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagctcttacaggttaccagacaaagcagagaaagcttctcgaacca
gtggatcatggaaaaattgaatatgaaccattcagaaaaaacttctatgttgaagttcca
gaattggcaaaaatgtctcaagaggaggtgaatgtatttcggttggaaatggagggcatt
actgtcaagggtaaaggttgccccaaaccaattaaatcttgggttcagtgtggaatttct
atgaagatcttaaattctctaaaaaagcatggttatgaaaagcccactccaatccaaacc
caggcgattcctgcgataatgtctggacgagatttgattggtattgccaagacaggaagt
ggaaagacgattgcctttctgttgcccatgtttagacacatcatggatcagaggtcttta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccttgggccttagagtggtctgtgtttat
ggaggaacaggaattagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgtacacctggtcgaatgattgacatgttagcagctaatagtggtcgggttacaaatctt
cgaagagtgacgtacgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcatagtggataatgttcgccctgacagacagacagttatgttttca
gctactttccccagagctatggaagccttggctcggagaatcctgagtaaacccattgaa
gtgcaggttggaggcagaagtgtagtttgctcggatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagctacttgaacttctaggtcattatcaggaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttaatg
agagcttcttacccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgattttaagaatgggacctgcaaacttcttgtggccacatctgttgctgcc
cgaggcctcgatgtgaagcatctgattcttgttgtaaactatagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaacaaaggctacgcatac
acttttatcacagaagatcaggctcggtatgctggagacataattaaagcccttgaactg
tcagggactgcagtgccacctgatctagagaaactctggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagagaaagaagttacaaaaagctgctcttggt
ctgcaagattcagatgatgaggatgctgcggttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggcagctcctggaacatctagtgttcctgct
cccactgcaggaaatgctgagaaactggaaattgcaaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgtaatgcaacaggccaccaatgcc
attctcagaggtggcaccatcctggctcccactgtatctgcaaaaaccattgcagagcag
cttgctgaaaagataaatgccaagctcaactatgtgcctttggagaaacaagaagaggag
agacaggatggtggacagaatgaatcttttaagagatatgaggaagaattagagatcaat
gacttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagt
gaatattctgaggctgcaattacaatcagaggaacatacttcccacctggcaaagagccc
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgagctggctgtgcag
aaagcgaaggcagaaatcaccaggcttataaaagaagaactgatccgattgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
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