Oryx dammah (scimitar-horned oryx): 120863686
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Entry
120863686 CDS
T07255
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120863686 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oda04091
]
120863686 (FREM1)
Lectins [BR:
oda04091
]
C-Type lectins
Lecticans
120863686 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
120863686
NCBI-ProteinID:
XP_040096079
LinkDB
All DBs
Position
Unknown
AA seq
2180 aa
AA seq
DB search
MSSPCWGGLGALLLLLLLPGWASPTFVRVNQGVRVMKGSSAFLSQDDLKFTIPKEKDACK
VEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRFTETDTFTE
TFTLRVYLLEPDCNIIRVSDDALEVSGFYGLSRVIDKNLLRFDYDRMASLECTVRLDPVG
TQLPAHGQLVLVEPQLEEPRGDQPHSFFPESQLGTELKCPGGRCTLGLKKVGSLKVSCEE
FLLMGLRYQHLSSPSPNIDYFSIQLDLTDSRSKITYKSERAWLPVYIRPGIPNQIPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSFT
WKDLRDMQIAYQPPNSSHSERRLYEVELEVYDFFFEKSAPITVHISIRTADTNAPRVSWN
TGLSLLEGQSRAITWQQFQIVDNDDIHAVQVVTVDGLQHGRLTVRGGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVVFRIFDSQHSIQHKFPINILPKDDSPPFLITNVLIELEEGQTIL
IQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFIQRDLFNGIIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTESQDRELLYTITAPPFFSSSRRHLDAGKLFMVDSIPRLTKTPAAPGLK
YFTQHAVNHMKVAYMPPMQDVGPHPRHVQFAFSVSNQHGGTLYGICFNITILPVDNQAPK
VFTKPLRVVEGGQCVISTEHVLISDEDTEPDNVHLSLQSLPQHGTVELDGFPLNTGATFS
WGDLQALKLRYQHDGAEELQDDILLQVTDGTNAAEYVLHVEVFPVNDEPPVLKADLIPMM
HCSEGEEVVITSEYIFATDLDSDDLKLMFMIVGEPQHGTVRRAGVRVHQFSQEDVVAGAV
TYKHTGGEIGLMPCFDTITLVVSDREAGPFVNGCCYNGPHPSVPLHESFPMYDLNITVYP
VDNQPPSVAIGTIFIVDEGFSAALTVNHLSATDPDTAADDLEFVLVSPPQFGYLENTLPS
AGFEKSNMGISIASFQWKDMKALHINYVQSRHLGMEPTADKFVLYVTDGKQHSMEIPFYI
IINATNDEAPDFIVQNITVCEGQMRELDSSIISATDRDIPKNPLLFSITHKPRHGLLINR
AFSRNFFQYKQSANPGQKHELVYNFSMELLKNGMRLMYVHDDSESLADDFTIQVSDGKHK
ILKTIFVEVTPVNDEKPMLSKKAEITMNMGETHIISSAVLSAIDEDSPREKIYYLFERLP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSKNQDSFTFHLWDGDNRSP
AFDCHITIKDMGKGDIVILAKPLVVSKGGRGFLTTTTLLAVDGTDTPEELLYVITSPPQF
GQVEYVRYPGVPITSFSQMDIAGQTVCYVDKSTTAVHRDTFRFIVSNGLQTKPGVFEITL
ETVDTALPVVTRNKGLRLVEGASGLLSPDLLQLTDPDTPAEKLTFLLAQLPRHGQLYLRG
MALVPCNFTQLDVDSRHVAYRHSGGDSRTDHFTFVATDGTNHGFLVDGRVWQEPVSFTIQ
VDQLDKAAPRITHLHSPSQVGLLKNGCYGIYITSRVLKASDPDSDDNQIIFKILRGPQHG
HLENSMTGEFIYEKFSQKDLNSKTILYIINPSLEVNSDTMEFQVMDPTGNSATPQSLELK
WSHIEWSRTEYEVCENMGMLPLEITRRGYSMDSAFVSVQVNQVSATVGKDFTMTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSY
AFNPNMPSAGEKGIWHLLSPGTSSPITSGSFHLERRPLPDSKQLAVTRGDALRDFGSEDL
SPVKLRARGDGKTVPPSSVYRNRTDIIYNYHGMISLKLEDDSSLTRRRKANVSIIREPQK
TTKVAEPPQADKEESTTGSHFPRQDPLPSFPKNCTLELKGLFHFEESLQKLYKCDGIAWR
SWSPHTKEVEDKSCPAGWHHHSGYCHSLITEQKGTWTTAAQACREHHQGSLVTVISRQHM
RWLWDISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGPPQRSRHGKDCVLVQRPGK
WHIKDCRKGKSHNYVCSRKL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccgtgctggggtgggcttggtgccctgctcctgttgctgctgctcccaggc
tgggccagccccacctttgtccgtgttaaccaaggggtcagggtgatgaagggcagttcc
gccttcctgtctcaagatgacctgaagttcaccatccccaaagagaaagatgcctgcaaa
gtggaagtcgtgatgaatgagccaataacccagagggttgggaaacttactccacaggtc
tttgactgccatttccttcccaatgaagtaaaatatactcataatggttgcccaattctt
gatgaagacacagtgaagcttagactttacaggtttacggagacagacactttcacggaa
acctttaccctgcgggtctacctcctggaaccagactgtaacatcatccgcgtgagtgat
gacgcactggaggtgtctgggttctacggcctgtcccgagtcattgataagaacctgctc
agatttgattacgacaggatggccagcctggaatgcacagtcagactggaccctgtggga
actcagctgccagcccacggccagttggttctggtggagccccagctggaagaacctcgt
ggagatcagccacatagtttcttccctgagtctcaattggggacagaactgaagtgtcca
ggtggcaggtgtaccctgggactgaagaaagtcggaagtctcaaagtgagctgtgaggag
ttcctgctgatggggcttcgataccaacacctgagttccccttctcccaacattgattac
ttctccatccaactggacctcacagatagcaggagtaaaatcacatacaagtcagagcgc
gcgtggctgcctgtctatatcagacctggaattcccaatcagattccaagagctgcattc
atggccatgtttattctggaagtggatcagttcatcctgacctcattgactacatcggtt
ctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagct
ccactccagggctatgtgactcacctgtgggatcacaccagaccagtgtcctccttcacc
tggaaggatctaagagatatgcagattgcctatcagccaccaaacagcagccattctgag
aggagactttatgaggtggagttggaggtctatgacttcttctttgagaagagtgcacct
attacagtccacatctccatcagaacagcagatacaaatgccccgcgagtgtcctggaac
acaggtctgagtctcctggagggacagtctagggccatcacatggcagcagtttcagatt
gtggacaatgatgacattcatgctgtccaggtagtcactgtggatggcctgcagcatgga
cggcttactgtgagagggggaaaggggtttctcttcactgtggctgaccttcaggctgga
gtcgttcgatatcatcatgatgacagtgactccaccaaagactttgtggtcttcaggata
tttgacagccaacacagcatccaacataagtttcccatcaacatcttgcccaaagatgac
agtccgccattcctcataacaaatgttctgattgaactggaggaggggcagaccatacta
atccagggttccatgttgagagcttcagacatggactccagtgatgactacatcttcttt
aatatcacaaaacccccacaagctggagagatcatgaagaaaccagcgccaggactgata
ggttatccagtccctggcttcattcagagggatctattcaatggcatcatttactatcgt
cactttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagtcacgaa
cctccaaacctctcagtgccacaggtggtgacaatccatatcactccagtagatgaccag
cttccaaaagaggctcccggagtttctcggcatttagttgtcaaggaaacggaggtggcc
tacatcactaagaaacatctacattttatagatacagaatcacaagacagggagctgctc
tacacaataaccgctcctccatttttctcctccagccgcagacacttagatgctgggaaa
ttattcatggtggacagcataccaaggctaaccaagactcctgcagctccggggttaaaa
tattttactcagcacgctgtgaaccatatgaaagtggcctacatgccacccatgcaagat
gtaggtccgcatccaagacacgtccagtttgccttttccgtcagtaaccagcacggtggg
acgctgtatgggatctgctttaacatcacgattcttcccgtggacaatcaggccccaaag
gtgtttaccaaacctctgagagtggttgagggaggtcagtgtgtcatcagcacagagcat
gtcctgatttctgacgaggacaccgaaccagacaacgtccacctctccttgcagagtctg
cctcagcatggaacggtggagctagatggattccctctaaacacaggggccacgttttct
tggggagacctccaggccttaaaacttagataccagcatgatggagctgaggaacttcag
gatgacatactgctgcaggtcacagatggcacaaatgcagctgagtatgttctacacgtc
gaggtgttccctgtaaatgatgaaccaccagtgctaaaggcggacctcattcccatgatg
cattgctccgagggtgaagaggtggtcatcacttctgaatacatttttgctactgacttg
gacagtgatgatttgaaactgatgttcatgattgttggagaacctcagcatgggaccgta
aggagagctggggtcagggtacatcaattctctcaggaagatgttgtcgcaggggctgtg
acgtacaaacacacaggtggtgagattggcctgatgccttgtttcgacaccattacattg
gtggtttcggacagagaagctggtccttttgtgaatggctgctgttacaatggacctcat
ccatctgttcctcttcatgagtcctttccaatgtatgatctcaacatcacagtgtatcca
gtggacaaccaaccgccttcagttgccataggtaccatattcattgtagatgagggtttc
tcagcagcccttactgttaaccatttgtctgccactgatcctgacactgcagcagatgac
ttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacactcccttct
gcaggttttgaaaagagcaatatgggcatcagcatagcttcgtttcagtggaaagacatg
aaggctttacatattaactatgtgcagtccaggcatctggggatggaaccaacggctgac
aagtttgtgttgtatgtcactgatgggaagcaacactccatggagataccattttacatt
ataatcaacgctacaaatgatgaagctcctgattttatagtgcagaatattactgtgtgt
gagggtcagatgagagagctggattcttccatcatcagtgctactgaccgggacattccc
aagaaccccttgctgttcagtatcactcacaaaccgcgtcatggcctcctcatcaacagg
gcatttagcagaaacttttttcaatataagcaatcagccaaccctggtcagaagcatgaa
cttgtctacaacttttccatggaacttctcaagaatggaatgaggttgatgtacgtgcat
gatgattcagagagtcttgctgatgactttacaatccaggtgtcagacgggaaacataag
atacttaaaaccatctttgtagaggtcaccccagttaatgatgagaaaccaatgctgagc
aagaaggctgaaattacaatgaatatgggtgaaactcatattatttctagtgctgttctc
tcagccatagatgaagactcacccagggagaagatttactatttatttgaaagacttccc
caaaatgggcaacttcaacttaagatagggagggactgggtccctctgtaccctggcatg
aaatgcactcaggaagaagtggatttgaacttgctgagatatacacacaccggggccatg
gactccaagaaccaagacagcttcaccttccacctctgggatggtgacaataggtcaccg
gcatttgactgtcacatcaccatcaaggatatgggaaaaggtgatattgtcatcctggca
aaaccacttgtggtgtctaaaggtggcagaggtttcctaacgaccaccactctccttgct
gtggatggaacagacacgcccgaggaacttctctacgtcatcacctccccaccgcaattt
ggccaggttgagtacgtccgctatcctggggtccccattacaagcttcagccaaatggat
atagcaggacagacagtctgctatgtggataagagcacaacagctgtccacagagacaca
ttcagattcatcgtcagcaatggacttcagaccaagcctggggtttttgagatcacactg
gagactgtggacacagccttacccgtggtgaccaggaacaaggggttgagactggttgaa
ggggcctcgggcctgctctcccctgacctcctgcagctgaccgaccctgacactccagcc
gagaagctcacctttcttctggcccagctcccacggcatggccagctctacctgcggggg
atggcgctggtcccatgcaatttcactcagctggatgtggacagcaggcacgtggcctat
cggcactcgggaggggattctcggactgaccacttcacttttgtggccacagatgggaca
aaccacggctttcttgtggacgggagagtgtggcaagaacctgtatcattcaccatccag
gtggaccagttggacaaagcggccccccgcatcacacacttgcattccccttctcaagta
gggctcttgaaaaatggttgttacgggatttacattacttcccgcgtgttgaaggcatca
gaccccgacagtgatgataatcagatcatctttaagattttacgaggcccccaacatggg
catctggagaactcaatgacaggtgaatttatctatgagaaatttagccagaaggactta
aacagtaagaccattctttacatcataaacccatctttggaagtaaattcagataccatg
gaatttcaagtcatggatcccacagggaactctgccactcctcaaagtttggaactgaag
tggtctcatattgagtggtcgcggactgaatatgaggtctgtgagaatatgggcatgctg
cccttggaaattaccagaaggggatattccatggactcagcctttgtgagtgtacaggtc
aaccaagtgtcagctacagttggaaaggatttcaccatgactccatctaagctggttcag
tttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccctgtgaatgcggttcttggcaca
aagacaaaaactgcagtgaaaattttggactcaaaaggagggcagtgccatccttcctat
gccttcaatccaaacatgcccagtgcaggggagaagggcatttggcacctgctctcccca
gggacttcctcacccatcacttctggttcctttcatctggaaagaagaccccttccagat
tccaagcagctagcagtcaccaggggtgacgccctacgggactttggttcggaagatctt
tctccagtgaagcttagggcccgaggcgatggcaaaacagttcctccatcctctgtttat
agaaatagaacagacatcatctataactatcatgggatgatttccctgaaactggaagat
gacagctccctaactcgcagaaggaaggccaacgtatccattattagggagccccaaaag
acaaccaaagtggcagaaccgcctcaagccgataaggaggaatccacaaccggctcacac
ttccccagacaggacccgttgccctcattcccaaagaactgcacactggaattaaaggga
ctcttccactttgaagaaagcctccaaaaactgtacaagtgtgatggaattgcctggaga
tcctggagcccccacaccaaggaggtggaagataaatcctgcccagctgggtggcaccat
cattcaggctactgccactccttgatcacagagcagaaaggcacgtggactacagctgcc
caagcttgcagggaacatcaccagggcagccttgtaactgtcatctccaggcagcacatg
cgatggctttgggacatcagtggaagaaagccgttttggataggtttgaatgaccaagtg
cgtgctggccactgggagtggattggcggtgaacctgtgaccttcaccaactggaggaga
gggcccccgcaacgttcaaggcatggcaaggactgtgttttggttcaaaggccaggaaaa
tggcacataaaggactgtaggaagggaaaatctcacaattatgtgtgctccaggaaactc
taa
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