Oryx dammah (scimitar-horned oryx): 120863729
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Entry
120863729 CDS
T07255
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120863729 (PTBP1)
03041 Spliceosome [BR:
oda03041
]
120863729 (PTBP1)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120863729 (PTBP1)
Spliceosome [BR:
oda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120863729 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
120863729
NCBI-ProteinID:
XP_040096203
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSACVTNGPFIMSGTSASTANGNDSKKFKGDSRSAGVPSRV
IHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIMSASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHL
NGHKLHGKPVRITLSKHQSVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSISEDDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcgtcccagacatagcagttggtacaaagcggggatctgacgagctcttc
tctgcctgtgtcactaacggaccctttatcatgagcggcacctcggcgtccacagcaaat
ggaaacgacagtaagaagttcaagggggacagcaggagtgcgggcgtgccctccagggtg
atccacatccgcaagctgcctggcgacgtcactgagggggaggtcatttccctggggctg
cccttcggaaaggtcaccaatctcctgatgctgaaagggaagaaccaggccttcatcgag
atgcacacagaagaggccgccaacaccatggtgaactactacacgtcggtgacgcctgtg
ttgcgcggccagcccatctacatccagttctccaaccacaaggagctcaagacagacagc
tcccctaaccaggcgcgggcccaggcggccctgcaggctgtgaactcagtccagtcagga
aacctggccctggcagcctcggccgcggcagtggatgcgggcatggccatggccggccag
agcccagtgcttaggatcatcgtggagaacctcttctacccagtgaccctggacgtgttg
caccagatcttctccaagttcggcaccgttcttaagatcatcacttttaccaagaacaac
cagttccaggcattgctgcaatacgctgaccccgtgagcgcccagcacgccaagctgtcg
ttggacggccagaacatctacaacgcatgctgcacgctgcgcatcgacttctccaagctc
accagcctgaacgtcaagtacaacaacgacaagagccgcgactacacgcgccctgacctg
ccatccggtgacagccagccctcgctggaccagaccatggctgctgcctttggtgcgcct
ggtataatgtcagcctctccgtatgcaggagctggtttccctcccacctttgcaattcct
caagccgcaggtctctctgttcctaatgtgcatggggctttggcccctctggctattcca
tcagcagcggcggcagcagcggcagcaggccggattgccatcccaggcctggcgggggca
ggcaactctgtcctgctggtcagcaacctcaaccctgagagagtcacaccccaaagcctc
tttattcttttcggcgtgtatggagatgtgcagcgcgtgaaggtcctgttcaacaagaag
gagaacgccctggtgcagatggccgacgggagccaggcccagctggccatgagccacctc
aatgggcacaagctgcacggaaagccagtgcgcatcacactctctaagcaccagagcgtg
cagctgccccgtgagggccaggaggaccagggcctgaccaaggactatggaaactcgccc
ctgcaccgcttcaagaagcctggctccaagaacttccagaacatcttcccaccctcggcc
actctgcacctctccaacatcccgccctccatctctgaggatgacctgaagattcttttc
tccagtaacggcgggatcgtcaaagggttcaagttcttccagaaggaccgcaagatggcg
ctgatccagatgggctcagtggaagaggccatccaggcgctcatcgacctgcacaaccat
gacctgggtgagaaccaccacctgcgggtgtccttctccaagtccaccatctag
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