Oryx dammah (scimitar-horned oryx): 120864101
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Entry
120864101 CDS
T07255
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oda03041
]
120864101 (DDX39A)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120864101 (DDX39A)
Spliceosome [BR:
oda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120864101 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120864101
NCBI-ProteinID:
XP_040096869
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESAPPPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaggatgtggaaaacgagcttctggattatgaggaagatgaagagccccag
gcacctccagagagtgctccacctccccccaagaaagacattaagggttcctatgtttcc
atccacagctctggcttccgggactttctgttgaagccggagctcctgagggccatagtg
gactgtggctttgagcatccgtcagaggtccagcacgagtgtattccacaagccatcctg
ggcatggacatcttgtgccaggccaagtcagggatgggcaagacagcagtttttgtgttg
gccactctgcagcagattgagcccgtcaacggacaggtgacggtccttgtgatgtgccac
actcgagagctggccttccagatcagcaaggagtacgagcgcttctccaaatacatgccc
agcgtcaaggtgtctgtgttctttgggggcctatccatcaagaaggatgaggaggtgttg
aagaggaactgtccccacgtggtggtggggacgccgggccggatcctggcacttgtgcgc
aataggagcctcaacctgaagaatgtgaagcacttcgtgttggatgagtgtgacaagatg
ctggagcagctggatatgcggcgggacgtgcaggaaatctttcgcctgaccccccacgag
aagcagtgcatgatgttcagcgccaccttgagcaaggagatccgacctgtgtgcaggaag
ttcatgcaagatcccatggaggtgtttgtggacgacgagaccaagctcacgctgcacggg
ctacagcagtactacgtgaaactcaaggacagtgagaagaaccgcaagctcttcgacctc
ctggatgtgctggagtttaaccaggttgtgatctttgtgaagtcagtgcagcgctgcatg
gccttggcccagctcctggtggaacagaacttcccagctattgccatccacaggggcatg
gctcaggaggagcgcctgtcgcgctatcagcagttcaaggacttccagcggcggatcctg
gtggccaccaatctgtttggccgagggatggacattgagcgcgtcaacatcgtcttcaat
tatgacatgcctgaggactcggacacctacctccatcgtgtggcccgtgcgggtcgcttc
ggtaccaaaggcctggccgttactttcgtgtctgacgagaacgatgccaaaatcctcaat
gatgtccaggaccggtttgaagtgaacgtggcagagcttccagaagaaattgacatctcc
acatacattgagcagagccggtaa
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