Oryx dammah (scimitar-horned oryx): 120864128
Help
Entry
120864128 CDS
T07255
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda02010
ABC transporters
oda04148
Efferocytosis
oda04975
Fat digestion and absorption
oda04979
Cholesterol metabolism
oda05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120864128 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120864128 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
120864128 (ABCA1)
04979 Cholesterol metabolism
120864128 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
120864128 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oda02000
]
120864128 (ABCA1)
Transporters [BR:
oda02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120864128 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
120864128
NCBI-ProteinID:
XP_040096902
LinkDB
All DBs
Position
Unknown
AA seq
2270 aa
AA seq
DB search
MSHFQLMISRWWQISGIQRMGQVWDETMFGWNQKRKRLLSRNPKSFKALMFLFLFFSSSI
STGHFPNKAMPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFTDARR
LLLYSHRDTSMKDIHKVLKTLYQIERSSSRLKLQDFLVDNETFSGFLHHNLSLPRPTVDK
MLGADVSLRKVFLQGYQLHLTSLCNGSKLGEVIRLGDQEVSRFCSLPREKLNAAEQVLRS
NLDILKPILTKLNSTSLFPSEELAKATKALLDSLGNLAQELFSMRSWSDMRQEVMFLTNV
NSSSSSTQIYQAVSRIICGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGTFYDNST
SPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPVTRQLMTEVNKTFQELAVFHD
LEGMWQELSPKIWTFMESSSEMDLVRTLLDSRVNGDFWEQRLEGLDWTAKDIVAFLAKHP
EDAQSTNGSVYTWREAFNETNRAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERK
FWAGVVFTGIAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWG
GFAYLQDVVEQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYS
VAVIIKGIVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLP
YSDPSVVFVFLSVFAMVTILQCFLISTFFSRANLAAACGGIIYFMLYLPYVLCVAWQDYV
GFTLKIFMSLMSPVAFGFGCEYFALFEEQGIGVQWDNLFESPTKEDGFNLTTSVSMMLFD
TFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGASEICMEEE
PTHLKLGVSIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP
PTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE
MEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGI
WELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLV
KKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHV
AEARLVEDIGHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKV
AEESGVDAETSDGTLPARRNRRVFGDKQSCLRPFTEDDAMDPNDSDIDPESRETDLLSGM
DGKGSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLELQPWMYNEQYTFVSNDAPEDVSTQELLNALTGMPGFGTRCMEGNPIPERPCLV
GEEKWTTAPVPQTITDLFRNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQKKQ
NTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSEEV
SDAIKQMKKHLKVVKDSPADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINN
AILRANLQKGANPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVS
STNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELF
TNNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGR
NLFAMAVEGVVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDI
LEIKELTKVYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF
LNKNSILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK
LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPD
LKPVQEFFELAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSRKRLHIEDYSVSQT
TLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttccaactcatgatcagtcgatggtggcagatttctgggattcagagaatg
ggacaggtttgggatgaaacaatgtttgggtggaaccaaaagagaaaaagattgctatca
aggaatcccaaatccttcaaagccttaatgtttctttttttgtttttctcttcctcaatt
tcaacaggccactttccaaacaaagccatgccctctgcaggaacacttccttgggttcag
gggatcatctgtaatgccaataacccctgtttccgttatccaactcctggtgaggctccg
ggagttgttggaaactttaacaagtccattgtgtctcgcctgttcacagacgctcggcgg
cttctcttgtacagccacagagacaccagcatgaaggacatacacaaagttttgaagacg
ttataccagatcgagcgttccagctcacgcttgaaacttcaggacttcttggtagacaat
gaaaccttctctggattcctgcatcacaacctctctctgccaaggccaactgtggacaag
atgctgggggctgatgtcagtctccgcaaggtatttttgcaaggctaccagttacatttg
accagtctgtgcaatggatcaaaactgggagaggtgattcgacttggtgaccaagaagtt
tctaggttttgtagcctgccaagggagaaactgaatgcagcagagcaggtgcttcgttcc
aacttggatatcctgaagccaatcctgacaaaactaaactctacatctctcttcccgagc
gaggagctggctaaagccacaaaagctttgctggatagtctcgggaatctggcccaagag
ctgttcagcatgaggagctggagtgacatgcggcaggaggtgatgtttctgaccaacgtg
aacagctccagctcctccacccagatctaccaggctgtgtcccgcatcatctgcgggcat
cctgagggcgggggcctgaagatcaagtccctgaactggtacgaggacaacaactacaag
gccctctttgggggcaacggcacggaggacgacgctggcaccttctatgacaactctaca
tctccttattgcaatgatttgatgaagaatctggagtccagtcctctttcccgcatcata
tggaaagctctcaagcccctgcttgttggaaagatcctatatacacctgatactccagtc
acaaggcagcttatgactgaggtgaataagaccttccaggaactggctgtgtttcatgat
ctagaaggcatgtggcaagaactcagccccaagatctggacctttatggagagcagctca
gaaatggaccttgtccggacactgttggacagcagagtcaatggtgacttttgggaacag
cgactggaaggcttagactggacggccaaagatatcgtggcatttctggccaagcaccca
gaggatgcgcagtccaccaacggctccgtgtacacctggagagaagccttcaatgagacc
aaccgggcaatccagaccatctctcgtttcatggagtgtgtcaacctgaacaagctagaa
ccagtagcaacagaggttctgctcatcaacaagtccatggagctcttggatgagcgcaag
ttctgggctggggtcgtgttcactggaattgctcccggcagcgtcgagttaccgcatcat
gttaagtacaagatccggatggatattgacaatgtggagaggacgaataagatcaaggac
gggtactgggaccctggtcctcgggctgacccctttgaagatatgcggtatgtttgggga
ggcttcgcttacttgcaggacgtggtggagcaggcaatcatcagggtgctgacaggcaca
gagaagaaaactggcgtgtacatgcagcagatgccttacccctgttatgttgatgacatc
ttcctgcgggtcatgagccggtccatgcctctcttcatgacgctggcctggatctactca
gtggctgtgatcatcaagggaattgtgtacgagaaggaggcgcggctgaaggagaccatg
cgcatcatgggcctggacaatggtatcctctggttcagctggttcatcagcagcctcatc
cctctgcttgtgagcgccggcctactggtggtcatcctgaaattaggaaacctgctgccc
tacagcgaccccagcgtggtgtttgtctttctgtctgtgttcgccatggtgaccatcctg
cagtgcttcctgatcagcacgttcttctccagagccaacctggcggccgcctgtgggggc
atcatttacttcatgctatacctgccctatgtcctgtgcgtggcgtggcaagactacgtg
ggctttaccctcaagatcttcatgagcctgatgtctcctgtggcttttgggttcggctgt
gagtactttgcccttttcgaggagcagggcattggggtacagtgggacaacctctttgag
agccccacaaaggaagatggcttcaaccttaccacctctgtgtccatgatgctgtttgac
acctttctctatggagtgatgacgtggtacatcgaggctgtgtttccaggccagtatgga
atccccaggccctggtatttcccttgcactaagtcctactggtttggcgaggaaagtgat
gagaagagccaccctggttccagccagaagggagcatcagaaatctgcatggaggaggaa
cccacccatctgaaactgggtgtgtccattcagaatctgatgaaggtttaccgagatggc
atgaaggtggctgttgatggcctggccttgaatttctatgaggggcagatcacctccttc
ctgggccacaatggagctggcaagaccaccaccatgtccatcctgactgggttgttccct
cccacctcgggcactgcctacatcctagggaaagacatacgctctgagatgagcaccatc
cggcagaacctgggggtctgtccccagcataatgtgctgtttgacatgctgactgttgag
gagcacatttggttctatgcccgcctgaaagggctttctgagaagcacgtgaaagctgag
atggagcagatggccttggatgttggtttgccgcccagcaaactgaaaagcaaaacaagt
cagctgtcaggtggaatgcagagaaagctgtctgtggccttggcctttgttgggggatcc
aaggttgtcattctggatgagcccacagccggtgtggacccttactcccgcagggggata
tgggagctgctgctgaaataccgacaaggccgcaccattattctctccacgcaccacatg
gatgaggcagacatcctcggggacaggattgccatcatttcccacgggaagctctgctgc
gtgggctcctccctgttcctgaagaaccagctggggacaggctactacctgaccctggtc
aagaaggacgtggagtcttccctcagctcgtgcagaaatagcagtagcactgtatcatac
ctgaaaaaggaggacagtgtttctcagagcagttctgatgctggcctgggcagcgaccat
gaaagtgacacgctgaccatcgatgtctccgcaatctccaacctcatcaggaagcatgtg
gctgaggcacggctggtggaagacatcgggcatgaactgacctacgtgctgccctatgag
gccgccagagagggagcctttgtggaactcttccatgaaattgatgacaggctctcagac
ttaggcatctccagttacggcatctcagaaactactctggaagaaatatttctcaaagtg
gctgaagagagtggagtggatgctgagacctcagatggcaccttaccagcaagacgaaac
agacgagtctttggggacaagcagagctgtcttcgcccttttactgaagatgatgctatg
gatccaaatgattctgacatagatccagaatccagagaaacagatctgctcagtgggatg
gatggtaaaggttcctaccaggtgaagggctggaagctcacacagcagcagtttgtggcc
cttttgtggaagagactgctgattgccagacggagtcggaaaggattctttgctcagatt
gtcctgccagctgtgtttgtctgcatcgccctggtgttcagcttgattgtgcctcccttt
ggcaagtaccccagcctggagcttcagccctggatgtacaatgaacagtacacatttgtc
agtaatgatgcacctgaggatgtgagcacccaggaactcttaaatgctctcaccggaatg
cctggctttggcacccgatgtatggaaggaaacccgatcccagaaaggccctgcttggtg
ggagaggagaagtggaccactgccccagtcccccagaccatcacggacctcttccgaaat
ggaaactggacaatggagaacccctcccccacctgccagtgtagcagcgacaagatcaag
aagatgctgcctgtgtgccccctgggggcaggggggctgcctcctcctcaaaaaaaacag
aatactgccgacatccttcagaacctcacgggaagaaacatttcggattatctggtgaag
acatacgtgcagatcatagccaaaagcttaaagaacaagatctgggtgaatgagtttaga
tacggtggattttccctgggtgccagtaattctcagtcacttcctccgagtgaagaagtt
agtgatgccatcaagcaaatgaagaaacacttgaaggtggtcaaggacagtcctgcagac
cgatttctcagcagcttgggaaggttcatgacaggactggacacgaaaaataacgtcaag
gtgtggttcaacaacaagggctggcacgccatcagctctttcttgaatgtcatcaacaat
gccattctccgggccaatctgcagaagggagcaaaccccagccagtatgggattactgct
ttcaatcacccgctgaacctcaccaagcagcagctctccgaagtggctctgatgaccaca
tccgtggacgtccttgtgtccatctgcgtcatctttgcgatgtccttcgtcccggccagc
tttgtcgtgttcctgatccaggagcgcgtcagcaaagcgaagcacctgcagttcatcagc
ggagtgaagcctgtcatctactggctctccaattttgtctgggacatgtgcaactatgtg
gtccctgccacgctggtcattatcatcttcatctgcttccagcagaagtcctacgtgtcc
tctaccaacctgcctgtgctcgctcttctgcttttgctgtatgggtggtccatcacacct
ctcatgtacccagcctccttcgtgttcaagatccccagcacagcctacgtggtcctcacc
agcgtgaacctcttcatcggcatcaatggcagtgtggccacgtttgtgctggagctcttc
accaacaataagctgaataacatcaatgatatcctgaagtcagtgttcttgatcttccca
catttttgcctgggacgggggctcattgacatggtgaaaaaccaggcaatggctgatgcc
ttggaaaggtttggggagaaccgctttgtctcaccactgtcttgggacttagtgggacga
aatctctttgccatggctgtggaaggagtggtgttcttcctcatcactgtgctgatccag
taccgattcttcatcaggcccagacctgtaaaggcaaagcttcctcctctgaatgatgag
gatgaagatgtgaggagggaaagacagagaattcttgatggtggaggacagaatgacatc
ttggaaatcaaggagttgactaaggtatacagaagaaagaggaaacctgctgttgacagg
atctgtgttggcattcctcctggtgagtgctttggacttctgggtgttaacggagctggg
aaatcatcaactttcaagatgttaacgggagataccacggttaccagaggagatgctttc
cttaacaaaaatagtatcttatcagacatccacgaagtccatcagaacatgggctattgc
cctcagtttgatgccatcacagagctgctgactggaagagaacacgtggagttctttgcc
cttttgagaggagtcccggagaaagaagtaggcaaggttggcgagtgggcgattcggaaa
ctgggacttgtgaagtatggagaaaaatatgctgggaactacagtggaggcaataagcgc
aagctctcaacagccatggctttgattggtgggcctccagtggtgtttctggatgaacca
accacaggcatggaccctaaagcccggcgcttcctgtggaattgtgccctaagtatcatc
aaggaagggagatcagtagtgcttacctctcacagtatggaagaatgtgaagctctttgc
actaggatggcaattatggtcaatgggcggttcaggtgtcttggcagtgttcaacatctg
aaaaataggtttggagatggttatacaatagttgtacgaatagcagggtcgaaccctgac
ctgaagcctgtacaggagttctttgaactcgcctttccaggaagcgtcctgaaggagaag
caccggaacatgcttcagtaccagcttccgtcttcactgtcttccctggccaggattttc
agcatcctttcccagagcagaaagcgactccacatagaagactactctgtctctcagaca
acacttgaccaagtatttgtaaactttgccaaggaccaaagtgatgatgaccacttaaag
gacctgtcattacacaaaaaccagacagtagtggatgttgcagtcctcacatctttcctg
caggatgagaaagtgaaagaaagttatgtatga
DBGET
integrated database retrieval system
