Oryx dammah (scimitar-horned oryx): 120864747
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Entry
120864747 CDS
T07255
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03440
Homologous recombination
oda03450
Non-homologous end-joining
oda04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120864747 (RAD50)
03450 Non-homologous end-joining
120864747 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120864747 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oda03032
]
120864747 (RAD50)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120864747 (RAD50)
DNA replication proteins [BR:
oda03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120864747 (RAD50)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120864747 (RAD50)
BRCA1-C complex
120864747 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
120864747 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF1664
AAA_29
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
120864747
NCBI-ProteinID:
XP_040097759
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHKLVRERQEKESETASQLLNDFTR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKNVKYDLQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTAARTQMEM
LTKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINTELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEMPELRNKLQSVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDITIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQLSPLETTLEKFQQEKEELINKKNTSHKIAQDKINEIKEKVKNIHSYMKD
IENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSEIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagtccccttacaattttggttggacctaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgaccccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaacttgtggctgtgcagagatctatg
ctttgtactcagaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gagtcaaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacgcaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacaactacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctttggcaacacaactagaattg
gatggctttgagctcggaccgttcagtgaaagacagataaaaaattttcacaagcttgtg
agagagaggcaggaaaaggaatcagaaactgccagccaactgttgaatgacttcacacga
aaagaggctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgagctaaagtcagaaatcctaactaagaagcagaatgagctgaaaaatgtg
aaatacgatttacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgagcgtgagctaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggagcagctaaaccatcacacagcagcacgcacccagatggagatg
ctcaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatacaggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaaccagactagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatactgagctaaaaaggaaggaagag
caattgtccagctatgaagacaaactgtttgatgtctgtggcagccaagattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcatcaaaacaacgagccatgttggct
ggagctacggcagtttattcccaattcattactcagttgacggatgaaaaccagtcatgt
tgccctgtctgtcagagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtctaagctgaggcttgctccagataaactcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactagtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaatgccagaattaagaaacaaacttcagagtgtgaacagagat
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacct
gaagaagaaagtgctaaagtgtgtctgacagatattacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagtgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacagcaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcggcagcagctagaagaacagactgtggaattatccactgaagttcagtcc
ttatacagagaaataaaggatgctaaagagcagctaagccctttggaaacaacactggaa
aaatttcagcaggaaaaagaagaattaatcaacaaaaaaaatacaagccacaaaatagca
caagataaaataaatgaaatcaaagagaaggttaaaaatattcacagttacatgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgagtgtgagaaacacaaagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtacagggaaatgatgattattatgagaacaacagagcttgtgaacaaggat
ctggacatctattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gagtacatagaaattcgatcagatgccgatgaaaatgtatcagcttctgataaaaggagg
aattacaactaccgagtggtgatgctaaagggagacacagccttggatatgagagggcgt
tgcagcgccggacaaaaggtattagcctcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcatccttgctttggacgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacaacagcgg
aacttccagcttctggtaatcactcatgatgaagattttgtggagctcctagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgagcagtgctcagagattgtg
acatgcagcgttagttccctaggatcttatgttcattaa
DBGET
integrated database retrieval system