KEGG   Oryx dammah (scimitar-horned oryx): 120864747
Entry
120864747         CDS       T07255                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda03440  Homologous recombination
oda03450  Non-homologous end-joining
oda04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    120864747 (RAD50)
   03450 Non-homologous end-joining
    120864747 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    120864747 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oda03032]
    120864747 (RAD50)
   03400 DNA repair and recombination proteins [BR:oda03400]
    120864747 (RAD50)
DNA replication proteins [BR:oda03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    120864747 (RAD50)
DNA repair and recombination proteins [BR:oda03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     120864747 (RAD50)
    BRCA1-C complex
     120864747 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     120864747 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 DUF1664 AAA_29 Intein_splicing
Other DBs
NCBI-GeneID: 120864747
NCBI-ProteinID: XP_040097759
LinkDB
Position
Unknown
AA seq 1312 aa
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHKLVRERQEKESETASQLLNDFTR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKNVKYDLQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTAARTQMEM
LTKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINTELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEMPELRNKLQSVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDITIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQLSPLETTLEKFQQEKEELINKKNTSHKIAQDKINEIKEKVKNIHSYMKD
IENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSEIVTCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagtccccttacaattttggttggacctaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgaccccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaacttgtggctgtgcagagatctatg
ctttgtactcagaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gagtcaaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacgcaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacaactacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctttggcaacacaactagaattg
gatggctttgagctcggaccgttcagtgaaagacagataaaaaattttcacaagcttgtg
agagagaggcaggaaaaggaatcagaaactgccagccaactgttgaatgacttcacacga
aaagaggctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgagctaaagtcagaaatcctaactaagaagcagaatgagctgaaaaatgtg
aaatacgatttacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgagcgtgagctaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggagcagctaaaccatcacacagcagcacgcacccagatggagatg
ctcaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatacaggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaaccagactagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatactgagctaaaaaggaaggaagag
caattgtccagctatgaagacaaactgtttgatgtctgtggcagccaagattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcatcaaaacaacgagccatgttggct
ggagctacggcagtttattcccaattcattactcagttgacggatgaaaaccagtcatgt
tgccctgtctgtcagagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtctaagctgaggcttgctccagataaactcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactagtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaatgccagaattaagaaacaaacttcagagtgtgaacagagat
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacct
gaagaagaaagtgctaaagtgtgtctgacagatattacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagtgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacagcaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcggcagcagctagaagaacagactgtggaattatccactgaagttcagtcc
ttatacagagaaataaaggatgctaaagagcagctaagccctttggaaacaacactggaa
aaatttcagcaggaaaaagaagaattaatcaacaaaaaaaatacaagccacaaaatagca
caagataaaataaatgaaatcaaagagaaggttaaaaatattcacagttacatgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgagtgtgagaaacacaaagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtacagggaaatgatgattattatgagaacaacagagcttgtgaacaaggat
ctggacatctattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gagtacatagaaattcgatcagatgccgatgaaaatgtatcagcttctgataaaaggagg
aattacaactaccgagtggtgatgctaaagggagacacagccttggatatgagagggcgt
tgcagcgccggacaaaaggtattagcctcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcatccttgctttggacgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacaacagcgg
aacttccagcttctggtaatcactcatgatgaagattttgtggagctcctagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgagcagtgctcagagattgtg
acatgcagcgttagttccctaggatcttatgttcattaa

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