Oryx dammah (scimitar-horned oryx): 120865203
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Entry
120865203 CDS
T07255
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oda03009
]
120865203 (DDX21)
03036 Chromosome and associated proteins [BR:
oda03036
]
120865203 (DDX21)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120865203 (DDX21)
Ribosome biogenesis [BR:
oda03009
]
Eukaryotic type
Pre-60S particles
Helicases
120865203 (DDX21)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120865203 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
120865203
NCBI-ProteinID:
XP_040098174
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MPGKLLSDADLESDAAVAKVEMPRKQNEKKGKKEKPKSSKTEEAAEEKEEMISSKAKKVK
KKVETSEVDVNSPKSKNAKKKEEPSQDDIISPKTKSSKKSKEPCEKTVSPKTKKALKNEE
PSEEELGAPKPKKMKKEKEINGEIKEKSPNLKNGFPDSGPDSNSKEAASEENSELEQEMT
VEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSF
AIPLVEKLLGELQDRKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPYGG
QIERMKNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVA
YKKDSEDNPQTLLFSATCPYWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHW
TQRAAVIGDVIRVYSGFQGRTIIFCETKKEAQELSQNVAIRQDAQSLHGDIPQKQREITL
KGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVCICF
YQHKEEYQLVQVEQKAGIKFKRIGVPSPTEIIKASSKDAIRLLDSVPPTAIGHFKQSAEK
LIEEKGAVEALAAALAHISGATSVDQRSLINSEAGFVTMILRCSIEMPNISYAWKELKEQ
LGEDIDSKVKGMVFLKGKQGVCFDIPTASVTEVQEKWHDSRRWQLSVATEQPELEGPREG
YRNFRGQREGNRGFRGQREGNRGGRGQRERSRSFRGQRSGGGNKSNRFQNKGQKRSFNKA
FGQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaactgcttagtgacgcggatttggagtcagacgcagccgtggcaaaagtg
gagatgccgcgtaaacaaaatgagaagaaaggtaagaaagagaagccaaaatctagtaag
actgaagaggcagcagaagaaaaagaagaaatgatttcttccaaagctaaaaaggttaaa
aagaaagtagagacttctgaggttgacgtgaattctcctaaatctaaaaatgcaaaaaag
aaggaagagccatctcaagatgacattatttctcctaaaaccaaaagttcaaaaaaatca
aaggagccctgtgaaaagacagtttctcctaaaaccaaaaaagctctaaaaaatgaagag
ccttctgaggaagaattgggtgcacctaagcccaaaaagatgaagaaagaaaaagaaata
aatggagaaattaaagagaaaagccccaacctcaagaatggattccctgactctggaccg
gactccaactccaaggaagctgccagtgaagaaaacagtgagttagagcaggaaatgact
gtggagcaaaaagaaggagctttctctaattttcccatatctgaagaaactattaaactt
cttaaagcccgtggggtgaccttcctgtttcctatacaagcaaagacgtttcaccatgtc
tatagtgggaaggatttgattgcacaggcgcggacaggaactggaaagacattctccttt
gctatccctttggttgagaaacttcttggagaactgcaagaccggaagagaggtcgtgcc
cctcaggtactggttcttgcacccacgagggagttggcaagtcaagtaagcagagatttc
agtgacatcacaaaaaagctggcagtggcttgtttttatggtggaactccctatggagga
caaattgaacgcatgaagaatgggattgatatcctagttgggacaccaggtcgtatcaaa
gaccacctgcagaatggcaagctagatctcaccaaacttaagcatgttgtcctggatgaa
gttgaccagatgttggatatgggctttgctgatcaagtggaagagattttatgtgtagca
tacaagaaagattcagaagacaatccccaaacattgcttttttctgcaacttgcccctat
tgggtgtttaatgttgctaagaaatacatgaaatctacatatgaacaagtggacctgatt
ggtaaaaagacacagaaaacagcgataactgtagagcatctggctatcaagtgccactgg
actcagagggcagcagttattggagacgtgatccgagtgtacagtggttttcaagggcgt
actatcatattttgcgaaacaaagaaagaagcccaggagttgtcacagaatgtggctata
agacaggatgcccagtcattacacggagacattccacagaagcaaagggaaatcaccctg
aaaggttttagaaatggtgattttggagttttggttgcaaccaacgttgctgcacgtggg
ctagacatccctgaggttgatctggttgtccaaagttctccaccaaaggatgttgaatcc
tacattcatcgttctgggcgaacaggtagagccgggagaactggggtttgcatctgcttt
taccagcacaaagaagaataccagttagtccaagtggagcaaaaagcgggaattaaattt
aaacgaataggtgttccttctccaacagagataataaaagcttctagcaaagatgccatc
aggctcttggactctgtgcctcccactgcgatcggtcacttcaagcaatcggccgagaag
ctgattgaggagaagggagccgtggaagccctggccgcagccctggcccacatttccggt
gccacgtctgtggaccagcgctccttgatcaactcagaagcgggctttgtgaccatgatc
ttgcggtgctcaattgaaatgccaaacattagttatgcttggaaagaacttaaagagcag
ctgggtgaggacattgattccaaagtgaagggaatggtctttctcaaaggaaagcagggt
gtttgctttgatatccctactgcatcagtaacagaagtacaggaaaagtggcatgattca
cggcgctggcagctttctgtggccacggagcaaccagagctagaaggtccacgggaagga
tatcgcaacttccgaggacagcgggaaggcaatcgaggcttcaggggacagcgcgagggc
aaccgaggtggcagaggacagcgggaaagaagtagaagcttcagaggacagcgatcagga
ggtggcaacaaaagtaacagattccaaaacaaaggccagaagcggagttttaataaagca
tttggacagtaa
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