Oryx dammah (scimitar-horned oryx): 120865274
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Entry
120865274 CDS
T07255
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120865274 (ZSWIM8)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120865274 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
120865274
NCBI-ProteinID:
XP_040098307
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFSWEEAYPLPGVTYSATDRKLALCWARALPPRPGASRAGGLEESRERPRPLPAEPAV
RPKEPGAKRKGLGEGVPASQRGPRRLSAEGGDKALHKMGPGGGKAKTLGGAGCGGKGSVG
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPHPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTASAGPPGLLPRELCTRDDLPSTDESGNGLPKTKEAAP
VVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHALFAGLKPLEQESRMEILFACAEAL
HAHGYSGEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVATLLKKIPLGPSEMS
TVRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQARLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTAEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAATVVPVISVGSSLYPGPG
LGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVASSAYPQGVHPAF
LGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVH
PASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALE
MLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAEPCSRPQPPACPGLPP
AGAALPAGIHAVHPPPPDSPDPRRLRRLCECHPQRSQRLLPDPHGYDAVQRHPAEPQAQQ
ADQGAVAAGLTRDDHLLPLSLTPIGPYTGTQASGYGGPSPRGNESWLDRSSPLSSPVAQT
GSCSWAVAWGQDASDPRNLGLGETALSGSGHWVASGIYLAFINI
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggagagcgcttctccttcgaggattcggac
cgctttgaggaggattcgctctgttccttcatctccgaggctgagagcctctgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccactggtggagctgtca
gcaaagcaggtggcatttcatatcccatttgaagtggtggagaaagtttaccccccagtg
cctgagcagctacaactccgaattgctttttggagcttccctgagaatgaagaggatatt
cgactctattcctgcctggccaacggcagtgcggatgagttccagcgaggggatcagctg
tttcgcatgagggctgtgaaggatcctctgcagatagggttccacctgagtgctacagtg
gtgccgcctcagatggtcccccccaaaggagcctacaacgtggctgtgatgtttgaccgc
tgccgagtcacttcctgcagctgcacctgtggtgctggggccaaatggtgcacccacgtc
gtggccctctgcctcttccgcatccacaacgcttctgcagtctgcctgcgggcacccgtg
tcagagtccctgtctcggctgcagagggaccagctgcagaaatttgctcagtacctcatc
agtgagctcccacaacagatcctccccacagcccaacgtctcctggatgaactcctctcc
tcccagtcaacagccatcaatacagtgtgtggagccccagatcccacagcagggccctcc
gcctccgatcagagtacatggtatttggatgaatcgacgctcaccgacaacatcaagaag
accctgcacaagttctgcggcccctcccccgtggtgttcagtgacgtgaactccatgtat
ctgtcttccacggagcctccagccgccgctgaatgggcatgtctgctgcgccctctgagg
ggccgcgagccagagggcgtctggaacttgcttagcatcgtgcgggagatgttcaagcga
agggacagtaatgctgcccccttgttggaaatcctcactgaccagtgcctcacctatgag
cagataacaggctggtggtacagcgtgcgcacctcagcctctcacagcagcgccagtggg
cacacaggccggagcaatgggcagtccgaggtggcggcccatgcctgcgccagcatgtgt
gacgagatggtcaccttgtggagactggccgtgctggaccccgcgctcagcccccagcgc
cgccgggaactgtgtacgcagctgcgccagtggcagctgaaggtgattgagaacgtgaag
cggggacagcacaagaagaccctggagcggctcttccctggcttccggccggcggtggag
gcctgctacttcagctgggaagaggcctacccgctgcctggcgtcacctacagcgccact
gaccgcaagctggccctgtgctgggcccgagccctgccccctcggccgggcgcctcgcgt
gctggaggcctggaagaatcccgggagcggccccggcctcttcctgccgagccagctgtg
cggcccaaggagccaggggccaaacgcaagggattgggtgagggggtccccgcgtcacag
cggggtccccgccgcctctcggctgaggggggagataaggcactgcataagatgggtcca
ggtgggggcaaagccaaaacactgggtggggctggctgtgggggcaagggctcagtgggc
agcgggagcaagcgacggctgagcagtgaggacagctccctggagccggatctggctgag
atgagcctggacgacagcagcctggccctgggtgcagaggccagcaccttcggtggattc
cctgagagcccgccaccctgccctcaccctggtggctcgcgaggcccttctaccttcctt
cccgaacctccagatacttacgaagaagatggtggcgtgtacttctcagaagggcctgag
cctcccacagcctctgctggcccccctggcctgttgcccagggagctctgtacccgggac
gacctcccttccacagacgagagtggcaatggactccctaaaaccaaagaggccgcccct
gtggttggcgaggaggatgacgactaccaggcatactatctgaatgcccaggatggggcc
gggggcgaggaagagaaggctgagggtggggctggggaggagcacgccctgtttgctgga
ctgaagccgctggagcaggagagccgcatggagatactgtttgcttgtgctgaggccttg
catgcgcacggctacagcggcgaggcctcccgcctcaccgtggaacttgcccaggacctg
ctagccaacccgcctgacctcaaggtagagccgccccctgccaagggcaagaagaataag
gtatctacaagccgtcagacctgggtggctacgaacacactgaccaaggcagctttcctg
ttgacagtgctaagtgagcgtccagagcaccacaacctggccttccgagtaggcatgttc
gccttggagcttcagcggcccccagcttctaccaaggccttggaggtgaagctggcctat
caggagtctgaggtggccactctgctcaagaagatccctttgggtccaagtgagatgagc
actgtgcgctgccgggccgaggagcttcgtgaagggacgctctgtgattatcggccagtt
ttgcctctcatgttggccagtttcatctttgatgttctctgtgctccagtggtttctccc
acgggttcccgacccccaagtcgcaactggaacaacgagatgcccggggacgaggaactg
ggatttgaagcagcagttgctgccttgggcatgaagacaacagtcagtgaggcagagcac
ccgctgctgtgtgaaggcacacgccgggagaagggcgaccttgccctggccctgatgatc
acttacaaagacgaccaggccagactcaagaagatcttagacaaactcttggaccgagag
agccagacgcataaaccacagacactgagttcgttctattcatccagccgcccggccaca
gccagccagaggtctccttcaaagcatgggggcccatctgccccaggggccctgcagcct
ctgacctcaggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgagagttccccacattccccctgtgag
ggtcttccacctgaagcagctctgaccccaaggccagaggggaaggttcccagccgcctg
gcacttggcagccgtggaggctacaacggacggggctggggctcaccagggcggcctaag
aagaagcacacaggcatggccagcattgacagcagtgcccctgaaacaacgtcggatagc
tccccaaccttaagcaggaggccgctgagagggggctgggcccctacctcctggggtcga
gggcaggacagtgacagcatcagcagctcttcctcagactcccttggctcctcgtcctcc
agtggaagtcgccgggccagtgccagtggaggggcccgggcgaagactgctgaagtcggc
aggtacaagggccgccgtcccgagagtcatgccccccatgtacccaatcagccatcagag
gcagctgcacacttctacttcgagctggcgaagacagtgctgatcaaggcagggggcaac
agcagcacttccattttcacacacccatcttcctcagggggccaccagggtcctcaccgc
aacctgcacctttgcgcctttgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttactcttcccacgtttcctggattacaggccaggca
atggagattggcagtgcagccctgactatactggtagaatgctgggatgggcacctgacg
ccccctgaggttgcgtccctggctgacagggcatcacgggcacgagactccaacatggtg
agggcagcggcggaactcgccctaagctgcctgcctcatgcccatgcgttgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgttggagaaggcc
tgcatggcagtggaagaggcagctaagggtgggggcgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctatatgagcaaacagcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccagtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcagggggggcccagggactgagccggttacggtggcggcggcggcagtg
acagcagccacagtggtgccagtcatctcggtggggtccagtttatacccaggtccaggc
ctggggcacggtcattcccctggcctgcacccctacactgctctgcagccccacctgccc
tgcagccctcaatacctcacccacccagctcaccccgcccaccccatgcctcacatgccc
cggcctgccgtcttccctgtggccagctctgcatacccgcagggtgtgcatcctgcattc
ctaggggcccagtacccttactcggtgactcccccctcacttgctgccactgctgtgtct
ttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccaggcctc
ccactgcccaccagtgtggcctgtgagttgtggggacagggaacagtgagcagtgtccat
ccagcttccacgtttccagccatccagggtgcctcactgcctgccctgaccacgcagccc
agccctctggtgagcgggggttttccaccacccgaggaggagacccacagccagcctgtc
aacccgcacagcctacaccacctgcacgccgcctaccgtgtcggaatgctggcactggag
atgctgggtcgccgggcacacaacgatcaccccaacaacttctctcgctcccctccctac
actgatgatgtcaaatggttgctggggctggcggcaaagctgggagatcgtcatggagac
gctgcagcggctgagccctgctcacgcccacaaccacctgcgtgccccggccttccacca
gctggtgcagcgctgccagcaggcatacatgcagtacatccaccaccgcctgattcacct
gacccccgccgactacgacgactttgtgaatgccatccgcagcgctcgcagcgccttctg
cctgacccccatgggtatgatgcagttcaacgacatcctgcagaacctcaagcgcagcaa
gcagaccaaggagctgtggcagcgggtctcactcgagatgaccaccttctccccctgagt
ctgacccccatagggccctatacagggacacaggcctctggctatgggggcccctcacca
agggggaatgagtcttggctggacagatcatccccactcagttccccagtagcccagact
ggcagctgctcttgggctgtagcttggggccaagatgcctcagaccctagaaacctaggg
ttgggggagacagccctgtctgggagcgggcactgggtggcctctggtatttatttggca
tttataaatatataa
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