Oryx dammah (scimitar-horned oryx): 120866130
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Entry
120866130 CDS
T07255
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03013
Nucleocytoplasmic transport
oda05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120866130 (NUP88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
120866130 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120866130 (NUP88)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120866130 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF7344
DUF659
FliJ
Motif
Other DBs
NCBI-GeneID:
120866130
NCBI-ProteinID:
XP_040099605
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MAGAEGGPGDGELWQTWLPNHAVFLRLREGLKNQSSAETEKPASSLPSSAPLPPQLLTRN
LVLGLGGELFLWDPEDSSFLVVRLRGPSGVGEEPSLSQYQRLLCINPPLFEIYQVLLSPT
QHHVALIGIKGLMILELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLKHAAWY
PSEMLEPHVVLLTSDNIIRIYSLRAPQTPTKVIVLSEAEEESLILNKGRAYTASLGETAV
AFDFGPLSAVPKHIFGQKGKEEVAAYPLYILYENGETFLTYISLWHSPGSVGKLLGPLPM
HPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDSRADL
IPSLYVFECVELELALKLASGEDEPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLT
WIHKLHKFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPT
MICITSTYECLVRPLLSTVHPASPPLLCTREDVEVAESPLRILAETPDSFEKHIRSILQR
SVANPAFLKSSEKDMAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQKK
KQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHSQLPVLSDSER
DMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSILK
EEGEHIREMVKQINDIRNHVNF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccgaaggaggcccgggcgacggtgagctgtggcagacctggttgcccaac
cacgccgtgttcttgcggctccgagagggactgaaaaaccagagctcagccgaaactgag
aagccagcttcatcattgccttcgtcggcgccgctgcctcctcagttgctgacgagaaac
ctggtcttgggcctcggcggagaactctttctatgggacccagaagacagctccttcttg
gtcgtgcgccttcggggccccagcggcgttggtgaggagccgtccctctcccagtaccag
agattgctttgcataaatccacccctgtttgaaatctatcaagtcttgttaagcccaaca
caacatcatgtagcacttataggaataaaaggacttatgatattagaattacctaaaaga
tggggaaagaattctgaatttgaaggtggaaaatcaacagtgaattgtagtaccactccc
gttgctgagagatttttcaccagttcaacctctctgactctgaagcatgctgcctggtat
ccaagcgagatgctagagccccacgtagtgctgttaacgtcagacaacatcataagaatt
tactctttgcgtgcgccccagacaccgactaaggtcattgtactttcagaagcagaggag
gaaagtctaatactcaacaaaggaagggcctacactgcatctctgggagagacagcagtt
gcatttgactttgggccattgtcagcagtcccgaagcacatatttggacaaaaaggcaaa
gaagaagtagcagcttaccctctgtacatcttatatgagaatggggagactttccttaca
tacattagtctgtggcacagccctgggagtgtgggcaagctgttgggcccgttgcccatg
catcctgctgctgaagataactatggctacgatgcttgtgctgtgctctgcttaccgtgt
gtccctaacatcctggtgattgctactgagtcaggaatgctgtatcactgtgttgtgctg
gagggggaagaagaagatgaccaaacatcagaaaagtcctgggattccagggctgacctc
attccatctctgtatgtgtttgagtgtgttgagttggagcttgccctgaaactggcatct
ggagaggatgagccctttgattctgacttttcttgtccaatcaaacttcacagagatccc
aagtgtccttcaagataccactgtactcatgaagctggtgtacatagtgttgggctaact
tggattcataaacttcacaagtttcttgggtcagatgaagaagataaggacagtttacag
gaactggctacagaacagaaatgctttgtagaacacattctttgtacaaagccgttgcca
tgcaggcagccagccccgattcgaggattctggattgtccctgacatcctggggccaaca
atgatctgcatcaccagtacctacgaatgcctcgtcaggcctttactaagcacagtccat
ccagcgtctcctcccctgctttgtacccgagaggatgttgaagtagcagaatctcccctc
cgtattctggctgaaaccccggattcctttgaaaagcatattagaagcattttgcaacgt
agtgttgcaaatccagcatttctgaaatcatctgaaaaagatatggctcctcctcccgaa
gaatgtcttcagctcatcagcagagccacccaggtgttcagagaacagtacattctaaaa
caggacctggcaaaggaggagattcagcggagggtcaaactgttatgtgaccaaaaaaag
aaacaattagaagatctcaactattgtcgagaggagaggaaaagtctacgggaaatggct
gagcgcttagccgacaaatacgaggaagccaaggaaaaacaagaagacatcatgaacagg
atgaaaaaagtacttcacagttttcactctcagctcccagttctctctgacagtgagaga
gacatgaagaaagaattacagctgatacctgatcaacttagacatttgggcaatgccatc
aaacaggttactatgaaaaaagactatcaacaacgaaagatggaaaaggtactgagtcct
caaaagcccaccattactctcagcgcctaccagcgaaaatgcattcagtccatcctgaag
gaggagggtgagcacataagagaaatggtgaagcaaattaatgacatccgaaatcatgta
aacttctga
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