Oryx dammah (scimitar-horned oryx): 120866217
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Entry
120866217 CDS
T07255
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03030
DNA replication
oda03420
Nucleotide excision repair
oda03430
Mismatch repair
oda03440
Homologous recombination
oda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120866217 (RPA1)
03420 Nucleotide excision repair
120866217 (RPA1)
03430 Mismatch repair
120866217 (RPA1)
03440 Homologous recombination
120866217 (RPA1)
03460 Fanconi anemia pathway
120866217 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120866217 (RPA1)
03032 DNA replication proteins [BR:
oda03032
]
120866217 (RPA1)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120866217 (RPA1)
Transcription factors [BR:
oda03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120866217 (RPA1)
DNA replication proteins [BR:
oda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120866217 (RPA1)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120866217 (RPA1)
MMR (mismatch excision repair)
120866217 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120866217 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Ubiquitin_At1g33420
IBR
Motif
Other DBs
NCBI-GeneID:
120866217
NCBI-ProteinID:
XP_040099719
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMEVEVLRSAEAVGSKIGNPVPYNE
GHGQQPVVPPPVSAASPPTSRPQQQNGSPGVASTASKAFGASKTFGKASGTSQVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGRHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYK
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggctattgcggccatcatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaacagtccaccc
cgttatcgactgcttatgagtgatggattgaatactctatcttctttcatgttggcaaca
cagctgaaccctcttgttgaggaagagcaattgtctagcaactgtatttgccagattaac
cgatttattgtgaacacgctgaaagatggaaggagagtggttattttgatggaggtagaa
gttttgagatcagctgaagcagttggatcaaagattggcaatccagtaccttataatgaa
ggacacggacagcagccagtagttcctcctcctgtctcagcagccagtccaccaaccagc
aggccccagcaacagaacgggagcccaggagtggcttccactgcatctaaggcttttggt
gcctcaaagacatttggaaaagctagcggtaccagccaagtgaacagctctgggggaaca
caggccaaagtggtacccattgccagcctcaccccgtaccaatccaagtggactatctgt
gctcgtgtcaccaacaaaagtcagatccgcacctggagcaactcccgaggggaagggaag
cttttctccatagaactggttgatgagagtggtgaaatcagagcgactgctttcaatgag
caagcggacaagtttttcccccttattgacgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagccgtcaaaaacgactacgagatgaccttc
aacaatgagacttctgtcatgccctgtgaagacggtcgtcacttacccacagttcagttt
gatttcacggggattggcgacctggagagcaaatctaaagactcacttgtggacataatc
gggatctgcaagaactacgaagatgtcacaaaaatcattgtgaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggacatgtcagggaaggtggtgaacgctaccctg
tggggagacgatgctgataaatttgatggttctagacaacctgtgatggccatcaaagga
gccagagtttctgattttggtggacggagcctctcagtactgtcttcaagcaccatcatc
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcatttccatctctgatctaaagagtggaggagcaggtgggagcaacacc
aactggaaaactttatatgaggtcaagtcggagaacctgggccaaggcgacaagcctgac
tattttagctctgtggcaaccgtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggattgtaacaagaaagtgatcgaccagcagaacggattgtaccgctgc
gagaagtgtgacagtgaattccccaatttcaagtaccgcatgatcctgtcagtcaatatt
gccgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaaacactgcttatctcggggaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaaactggagacc
tacaatgatgagtctcgcattaaggccacggtggtggatgtgaagcctgtggactacaaa
gaatacggcagaaggctggtcatgaacatcaggagaaacgcggcgatgtga
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integrated database retrieval system
