Oryx dammah (scimitar-horned oryx): 120866608
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Entry
120866608 CDS
T07255
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120866608 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oda02000
]
120866608 (ABCA6)
Transporters [BR:
oda02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
120866608 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
nSTAND1
AAA_16
AAA_29
AAA_22
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
120866608
NCBI-ProteinID:
XP_040100344
LinkDB
All DBs
Position
Unknown
AA seq
1626 aa
AA seq
DB search
MHMKQKSVSQQTQALLCKNLLKKWRMKRENLLEWGFPILLALHMCILSHLNENVHFPGMP
PQNLGRVDKYNRSFMDVVYTPVSNLTQQIMNKTAFAPVMKGRRIIGAPDEKSMDEIMLDT
FSYSVGVIFNDSFSYKLKFYRRYYVPILKEDFFTAYCQRTNINDFSCALERYWKGGFVPL
QAAINAAIIQTTANHYVMEELMSVTAVNMKTPPFIFKENLQNEMFIFYCLLYFSPFLYFL
SLNVTRERKKYKDLMNLMGLQDSAFWLSWGLIYAAFIFVASVIITVIITSTEIIILTGFT
VIFTLFFLYGLSLIALVFLMTVLLKKTFLTSLLVFLLTLFWGSVGFTTFYQQLPSPLKWI
FSICSPFAFSAGINQIIHLDYTMNGVIFPDASGDSYIMIATFSMLTFDALLYLVLALYFD
KILPYGNESHYSPLFFLNSSPCIQHRRTGNHAAEKDVDPAPPSDDHCEPVAPEFQGREAV
RIRNVKKVYKEKTGKVEVLKGLCFDIYEGQITAILGHSGAGKSALLRVLSGSSVPTEGSV
TIYNKNLSEMQDLEEIQKITGVCPQFNVQFDTLTVKENLRLFAKIKGIQPKDVEQEVQRV
LLELDIQNIQDNLATLLSEGQKRKLTIGIALLGDPQVLLLDEPTAGLDPFSRHRVWNFLR
ERKAGRVILLSTNLTDEADILADRKVILSNGRLKCAGSSVFLKRRWGLGYHLSLYRNETC
DPEKITSLINHHIPDAKLKTESKEKLVYTLPAERTNKFPDLFSDLDEGCSLGVMSYEVST
STLNEVVTKLEGDSVAEQDFEQAEMSRDTGRLHEMDPPCPSAPESQKAASVAGLWRLQFW
AMARLRFLRLRRGKKGLLTLLFVFGVAVFPLIVESIFYAVLNETTDWEFKPELYFLSPGQ
LPQDPRTSLLIINNTESNIEDFIQSLKHQNILLEVDDFENRNGTEDPSYNGAIIVSGKRK
DYRFSVVCNTKRLHCFPVLVSVVSNALLRMFNQTRHIRTERSAYPLGHTLLRTGLPQGSF
FLFFVTCSLSPYIAMSSVSDYKKRTKPQLWISGLFPSAYWCGQALVDVSLYSLILLSMYL
IFYLANTGYIYLTSRVIFALVLMALGYAASLVFLTYVIAFIFRKRRKNSGLWSFCFYVVT
VIAFGIIMLFAPDVPVLITCMTLVPSATLSGFVAFLQQRMSQYWIKYQEASYDLSAADFL
VCLIPYFQALLFMFVLRCLEAKCGKKIMQKDPVFRISPQSRDARSNTEEPVAEDEDVQAE
RIRTATALNTSIEEKPVIIASCLHKEYAGQKKRCFSRRRKKTAVRNISFCVKKGEILGLL
GPSGAGKSSSVRMISGMMTPTAGEVELTGYGSDPDQQGDASIRFLGYCPQENVLWPSLTT
RDHLEVFAAVKGLQRAEARVAISRLVDAFKLHEQLNVPVQKLPGGAARKLCFVLSLLGDP
PILLLDEPSTGLDPAEQKQLWQTIQRAVRNTARGALLSTHSVAEAEAVCDRVAVMVSGRL
RCIGSIQHLKNSLGKDYILELKLKEASQGMSVHTEVLRLFPQAAQQERYSSFSAYRLPVQ
DAQPLSQAFHKLETVKRNFNLEEYSLSQCTLEKVFIELSKEQELGDVDEEVNATMRWKLL
CPSEGP
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgaaacagaaaagtgtatcccagcaaactcaagcacttctgtgcaagaatctc
ttgaagaaatggaggatgaaaagagagaacttgctggaatgggggttcccgatactttta
gcccttcatatgtgcatactttcacatttaaatgaaaatgtccattttcctggaatgcct
cctcagaacctgggaagggtagataaatataacaggtcttttatggatgttgtgtacaca
ccagtctccaacttgacccagcagataatgaataagacggcatttgcccccgttatgaaa
ggaagaagaatcattggggcaccagatgagaaatccatggatgaaataatgctagacact
ttctcatacagcgtgggtgtcatctttaacgactctttctcttataagttaaaattttat
cggagatattacgttcccattttgaaggaggattttttcacagcttactgccagcgtaca
aatattaatgacttttcctgtgcactggagagatactggaaaggaggattcgtgccttta
caagctgccattaatgctgctattatacaaacgacagcaaatcactatgtgatggaggag
ttgatgtcagttactgctgtaaatatgaagacgccaccctttatctttaaggagaacctt
caaaatgagatgttcattttttactgcttgctttacttctccccgtttctatatttccta
tcactcaacgttacaagagagagaaaaaagtataaggatttgatgaacttgatgggtctg
caagattcagccttctggctctcctggggtttaatctatgctgccttcatctttgttgct
tccgtaatcatcacagtcatcataacatctactgaaattatcatcctgacaggcttcaca
gtcatatttactctctttttcttgtatggcttatctttgattgctctggtattcctgatg
accgtgctgctaaagaaaaccttcctcaccagtttgcttgtgtttctcctcaccctcttc
tgggggagcgtgggattcactacgttttaccaacaacttccttcacctttgaagtggatt
ttcagtatctgtagcccctttgccttcagtgctggtattaaccagattatccacctggat
tacactatgaatggtgtcatttttcctgacgcttctggagactcatatataatgatagct
actttctccatgttgactttcgatgcccttttatacttggtgttggcgttatactttgac
aaaatcctaccctatggaaacgagtcccattattcgccattgtttttcctgaactcgtca
ccttgtatccaacaccggaggactggtaaccatgccgctgagaaagacgtggaccctgcg
cccccctctgatgaccactgtgagcccgtagccccagaattccaggggagagaagccgtc
agaatcagaaatgttaaaaaagtatataaagaaaagactggaaaagtggaagtattgaaa
ggcttgtgctttgacatctatgaaggtcagatcacggcaattctgggtcacagtggggct
ggcaaatcggcgttgctgcgcgtccttagcgggtcgtctgttccaacagaaggatcagtt
accatctataataaaaatctctctgaaatgcaagacttggaggaaatccaaaagataact
ggtgtttgtcctcaattcaatgttcagtttgacacgctcactgtaaaggagaacctcagg
ctgtttgcaaaaataaaaggaattcagccaaaggatgtggaacaagaggtacaaagagtt
ttattggaattggacatacagaacattcaggataatcttgctacacttttaagtgaaggt
caaaaaagaaagctgaccattgggattgcccttttaggagatcctcaagttttgctatta
gatgagccaactgcgggattggatcctttctcaagacatcgagtatggaacttcctcagg
gagcgcaaagcaggccgcgtgatcctcctgagcaccaacctgacggatgaagcggacatc
ctggctgataggaaagtgatcctgtccaatgggaggctgaagtgtgcgggctcctctgtc
tttctgaagcgaagatggggtcttggctatcacctaagtttgtacagaaatgaaacgtgt
gatccagaaaaaataacatccctcattaatcaccacatccctgatgctaagttgaaaacg
gaaagcaaagaaaagcttgtgtatacattgcctgcggaaaggacaaataaatttccagac
cttttcagtgacctcgatgagggttgcagcctgggtgtgatgagttatgaggtttccaca
tcaactctgaatgaagtcgtcacgaaactggaaggagactcagtggctgagcaagatttt
gaacaagcggagatgagcagggacacgggtcggctgcatgagatggatccaccttgtcct
tctgcccccgagtcgcagaaggctgcgagtgtcgcgggcctctggaggctgcagttctgg
gcgatggctcggctccgtttcttacggttaagacgaggaaagaaagggcttctgacccta
ctgttcgtgtttggagttgcagtgttccctttgattgtggaaagcatattctatgctgtg
ttgaatgaaaccactgattgggaatttaaacctgagttgtatttcctctctccgggacaa
ctgccccaagacccccgtaccagcttattgatcatcaataacacagaatcaaacattgaa
gatttcattcagtcactgaagcatcaaaatatacttttggaggtagatgactttgaaaat
agaaatggcaccgaagatccatcttacaacggggccatcatcgtttctggcaaacgaaag
gactatcggttctcagtcgtgtgcaacaccaagaggctgcactgctttcccgtcctcgtg
agcgtcgtcagcaacgcgctgcttcggatgtttaatcaaacacggcacattcggaccgag
agaagcgcctaccctttgggtcatacgctgctccggaccgggctcccccaaggctcgttc
ttcttgttctttgtcacctgcagcctgtctccttacatcgccatgagcagcgtcagcgat
tacaaaaagagaaccaagccccagctgtggatctctggcctcttcccctctgcgtactgg
tgtgggcaggcgctggtggatgtcagcctctacagtctcattctcctttccatgtatttg
attttctacctagcaaacacggggtacatttatctcacaagtcgagttatatttgctttg
gttctcatggcgcttggttatgcagcttcgcttgtcttcctgacatatgtgatagcattt
attttccgtaagaggagaaaaaatagcggcctttggtcattttgcttctatgtagtcacg
gtcatcgcatttggcatcattatgctgtttgcgccagacgtccctgtcctgataacttgc
atgactttagttccctcagccaccttgagtggatttgtagcttttttgcaacagagaatg
tctcaatactggataaaatatcaggaagcaagttatgacctgagtgcagctgactttcta
gtgtgcctaataccttactttcaggctttgctcttcatgtttgtcctgcgatgcctagaa
gcaaaatgtggaaagaaaataatgcaaaaggatcctgttttcagaatttccccccaaagc
agagatgctcgttcaaacacagaagaacctgtagctgaagacgaagatgtccaagcagaa
agaataagaacagctaccgccctgaacacgtcaatagaggagaaaccggtcataattgct
agctgtctgcacaaagaatatgcaggccagaagaaaagatgcttttcaagaaggaggaag
aagacagcagtgagaaacatctccttctgtgttaaaaaaggagaaattttggggttgctg
ggacctagcggtgctggtaaaagctcgtctgttagaatgatatctgggatgatgacacca
acggctggagaggtggagctgacggggtacggttcggatccagatcagcagggggacgcc
agcatccggttcctgggctactgtccccaggagaacgtgctgtggcccagcctgaccacc
cgcgaccatctggaggtgttcgccgccgtgaaagggctgcagcgagcggaggcccgagtg
gccatctcacggctggtggacgccttcaagctgcacgaacagctgaacgttcccgtgcag
aagttaccgggaggggccgccagaaagctgtgttttgtgctgagcctcctgggagacccg
cccatcctgcttctggatgagccgtccacgggcttggaccccgcagagcagaagcagctg
tggcagacgatccagagagccgtcagaaacacggcgcggggggccctgctgagcacccac
tccgtggccgaggcggaggccgtgtgcgaccgcgtggccgtcatggtgtccgggaggctg
agatgcatcggctccatccaacacctgaaaaacagcctcggcaaggattacattctggaa
ctaaagctgaaggaggcttcccaggggatgtcggtccacacggaggtcctgcggcttttc
cctcaggccgcccagcaggaaaggtactcctccttctcggcttacagactacctgtgcag
gacgctcagcccctctcacaggcctttcacaagttagagacagtgaaacgtaactttaac
ctggaagaatacagcctctctcagtgcaccttggaaaaggtgttcatagaactttctaag
gagcaggagctgggagatgtcgatgaagaggttaatgcaaccatgagatggaagctcctc
tgcccctcagagggcccgtga
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