Oryx dammah (scimitar-horned oryx): 120866680
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Entry
120866680 CDS
T07255
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03440
Homologous recombination
oda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120866680 (BRIP1)
03460 Fanconi anemia pathway
120866680 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oda03400
]
120866680 (BRIP1)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120866680 (BRIP1)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120866680 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
120866680 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
120866680
NCBI-ProteinID:
XP_040100405
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MMSSAEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSAL
AWQQSLSGKPVDESLSKKTEVPLSCCCTCHSRNFANSDVHQRTSYHFSSPSAPPSERNVT
LSGSQDSPEKTTLAAKLSAKKQASMYRDENDDFQVEKKRIRPLETAQQIRKRHCFEKEVH
HLDAKVASGKTTKLNSPLGKINSISPQNPPGHCSRCCCSTKQGNSEDSSNTTKKNHGGKS
KIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHSCVHPEVIGNFSRNERCMEL
LDGKNGKSCYFYHGVHKISDQHTLQTFQGMHKAWDIEELVSLGRKLKACPYYTARELMQD
ADIIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDE
LDSMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERDYESSCKVWSGSEMLLNLHKMG
ITTATFPILQGHFSAALQKEEKVPSIHGKEEAREIPIISASTQIMLKGLFMVLDYLFRQN
SRFADDYKVAIQQTYSWINQTDTTDKNGLLILSKNKKRSRLKAAVHVLNFWCLNPAVAFS
DINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLC
ATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVK
TVVVEPQGGEKIDFDELLQVYYDAVKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVVT
IGIPFPNVKDLQVELKKQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGA
LILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFESALESLAEFSKKHQKVIAVSKEDRKS
IRDSEPTLGVACSKDSTYFLEAASHLSPEYATEDDPELLEESAQAVGAERIVISRSTSPT
FSKQIDRVSWSGRNVGGQCLTGKILTGTPMVRSSEDCASTSSTFKTEKKCETVLPVTDKY
ESSYLTVDTSFGACPQSETIVPSTNVDATNLNSEDPAIHLSVVSEEAEPSASNTASETEA
EDESIYFTPELYDPVDTNEEKNELAGTERDSRLTNSSNCILTEDLFEIKTTKGVDSVREM
EAEDCTDTKLKRLMPIKESKVDDLGSNVKTTXINELELGKYSGNGYKLSSSKNKDVFLVL
GNNT
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagctgaatatacaattggtggggtgaagattaactttccttgtaaagct
tatccatcccagcttgctatgatgaattctattgtcagaggattaaatagtaagcagcac
tgtttattggagagccccacagggagtgggaaaagcttagccttactttgttccgcttta
gcatggcaacagtctcttagtgggaagccagtggatgaaagcttaagtaagaaaactgaa
gtacccttgtcgtgttgttgtacatgccattcaaggaactttgcaaacagtgacgtgcac
cagcgaacttcgtatcatttcagcagtccaagtgcaccaccttctgaaagaaatgtcact
ttgtcagggtctcaagactctcctgaaaaaactacactggctgcaaagctatctgctaag
aagcaggcatctatgtatagagatgaaaatgatgattttcaagtagagaagaaaagaatt
cgacccttggaaactgcacagcagatcagaaaacgtcattgttttgagaaggaggtacac
catttggatgcaaaagttgcttcaggaaagaccacaaaactcaactctccgttaggaaag
ataaactccatttctccacagaatccccctggtcactgttctaggtgctgttgttctact
aaacaaggaaacagtgaagattcttcaaataccactaagaagaatcatgggggaaagtcc
aagatacccaaaatatattttgggacacgcacacacaagcagattgctcagattactaga
gagctccggagaacggcgtactcaggggtcccgatgactattctttccagcagggatcat
tcttgtgtccatccggaagtaataggtaacttcagcagaaatgaaaggtgcatggaactg
ctggatggaaagaatggaaaatcctgctatttttatcatggtgttcataaaattagtgac
caacacacattacagactttccaagggatgcacaaggcctgggatatagaagaacttgtc
agcttggggagaaaactaaaggcatgtccatattacacagcacgagaactaatgcaagat
gctgacataatattttgtccctacaactatcttctagatgcacagataagggaaactatg
gacatcaatctgaaagaacaggttgtcattttagatgaagctcataacattgaggactgt
gctcgggaatcagcaagttacagtgtaacggaagtccagcttcggtttgctcgggatgaa
ctagatagtatgattaactataatataaggaagaaagatcatgaacccctacgagctgtg
tgctgtagcctcattaattggttagaagcaagctctgaacatcttgtggaaagggattat
gaatcatcctgtaaagtatggagtggaagtgaaatgctcttaaatttacacaaaatgggc
atcaccactgctacttttcctattttgcagggacatttttctgctgcccttcaaaaagaa
gaaaaagtcccatcaattcatggtaaagaggaggcaagagaaatacctattattagtgct
tcaactcaaataatgctcaaaggactttttatggtgcttgactatctttttaggcaaaat
agcagatttgcagatgattataaagtcgctattcaacagacttactcttggataaatcag
actgatactacagataaaaatgggttattgattctatcaaaaaataagaaacgttcacgg
ctgaaagcagcagttcatgtgctaaatttttggtgcttaaatccagctgtggccttttca
gatattaatggcaaggtttggacaattgttttgacatctgggacattatcaccaatgaaa
tccttttcatcagaacttggtgttacatttactattcaactagaggctaatcatgtcatt
aataactcacaggtttgggttggcaccattgggtcagggcccaagggtcgcaatctctgt
gctaccttccagcacacggaaacatttgaattccaggatgaagtgggagctctcttgtta
tctgtgtgccagactgttagccaaggaattttgtgtttcctgccatcttacaagttatta
gaaaagttaaaagaacgttggctctctactggcttatggcataatctggagttggtgaag
acagtcgttgtagaaccacagggaggagaaaaaattgattttgatgaattactgcaggtg
tactatgatgcagtcaagtacaaaggagaaaaagatggagccctcctggtggcagtttgt
cgtggtaaagtgagtgagggtctggatttctcagatgataatgcccgtgctgtcgtaaca
ataggaattccttttccaaatgtgaaagatcttcaggttgaactgaagaaacagtataat
gatcagcattcaaaattaagaggtcttttaccaggtcgtcaatggtatgaaattcaagca
tacagggccttaaaccaggcccttggtaggtgtattcgacacaagaatgattggggggct
cttattctagtcgatgatcgcttcagaagtaacccaagtcgatacatatctggactttct
aaatgggttcgacagttgattcagcaccattcaacctttgagagtgcactggaatccttg
gctgaattttccaaaaagcaccaaaaggtcattgctgtatccaaagaagacagaaaatct
atacgggacagtgagcctacacttggagtggcttgttcgaaggatagtacctattttcta
gaagcagcaagccatttatcaccagaatatgctactgaagatgatccagaattattagaa
gagtctgcccaggcagtaggagcagaaagaattgtgatttccagatccacaagccccacc
ttcagcaaacaaatagaccgagttagctggtctgggagaaatgtggggggacagtgtctt
actggtaaaattctgactggaacacctatggttaggtcatcagaggactgtgcctctact
tcttccactttcaaaacagaaaagaaatgtgaaacagttttgccagtcactgataaatat
gagtcctcatatctgacagtagatacgtcatttggagcatgccctcagtcagaaaccatt
gttccatctacaaacgtcgatgctactaatctgaattcagaagatccagcaattcatttg
tctgtagtaagtgaagaagctgaaccttctgcttcaaatacagcttctgaaacagaagca
gaggatgaatctatctattttacacctgaactttatgatcctgtagatacaaatgaagag
aagaatgaactagctggaactgagagagacagtagattgactaatagttcaaactgcatt
ttaaccgaagatctttttgaaattaaaactacaaaaggagtggattcagtcagagaaatg
gaagctgaggactgcacagacacaaagttgaaaagactcatgcctattaaagaaagtaaa
gttgatgaccttggaagtaatgtaaaaacaactnncataaatgaattggaactgggaaaa
tactcaggaaatggatataaattgtcttcttccaaaaataaagatgtgttcctggtgtta
ggtaataatacttaa
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integrated database retrieval system
