Oryx dammah (scimitar-horned oryx): 120866838
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Entry
120866838 CDS
T07255
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03013
Nucleocytoplasmic transport
oda03015
mRNA surveillance pathway
oda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120866838 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
120866838 (EIF4A3)
03015 mRNA surveillance pathway
120866838 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120866838 (EIF4A3)
03041 Spliceosome [BR:
oda03041
]
120866838 (EIF4A3)
03009 Ribosome biogenesis [BR:
oda03009
]
120866838 (EIF4A3)
03012 Translation factors [BR:
oda03012
]
120866838 (EIF4A3)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120866838 (EIF4A3)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120866838 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
120866838 (EIF4A3)
Spliceosome [BR:
oda03041
]
Complex C
Other components
EJC/TREX
120866838 (EIF4A3)
Ribosome biogenesis [BR:
oda03009
]
Eukaryotic type
90S particles
Helicases
120866838 (EIF4A3)
Translation factors [BR:
oda03012
]
Eukaryotic type
Initiation factors
eIF-4
120866838 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
120866838
NCBI-ProteinID:
XP_040100697
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacggccacgatggcgacctcgggttcggcgcggaagcggctgctcaaagaa
gaagacatgaccaaagtggaattcgagactagcgaggaggtggacgtgacccccacgttc
gacaccatgggcctgcgggaggacttgctgcgcggcatctatgcctacggttttgaaaaa
ccgtcagcaatccagcagcgagctattaagcagataattaaaggaagagatgtcattgcg
caatctcagtctggtacaggcaaaacagccaccttcagtatttctgtcctccagtgtttg
gatattcaggttcgtgaaacccaagctttgatcttggctccaacaagagagttagctgta
cagatccagaagggcctgcttgctttgggtgactacatgaatgtccagtgccatgcctgc
atcgggggcaccaatgtgggggaggacatccggaaattggactacggacagcacgttgtc
gccggcacacctgggcgtgtctttgatatgattcgtcgcaggagtttgaggacacgtgct
atcaagatgttggttttggatgaggctgatgaaatgttgaataaaggtttcaaagaacag
atctacgacgtgtacaggtacttgcccccagccacacaggtggtgctcatcagtgccaca
ctgccccatgagatcctcgagatgaccaacaagttcatgaccgaccccatccgcatcttg
gtaaaacgtgatgaactgactcttgaaggcatcaagcagttttttgtggctgtggaacgg
gaagagtggaagtttgacaccctgtgtgacctctacgacacgctgaccatcacacaggct
gtcatcttctgtaataccaagaggaaggttgactggctgacggagaagatgagggaagct
aactttaccgtgtcgtccatgcatggggacatgccccagaaggagcgagagtccatcatg
aaggagttccggtcaggtgccagccgagtgctcatttctacagacgtctgggcccggggg
ctggacgtgccccaggtgtccctcatcattaactatgacctacccaacaacagagagctg
tacatacacagaattgggcgatcaggtcgatatggccgaaagggtgtggccattaatttt
gtaaagaatgatgatatccgcatcctcagagacatcgagcagtactactccactcagatt
gatgagatgcctatgaatgttgctgatctgatctga
DBGET
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