Oryx dammah (scimitar-horned oryx): 120867395
Help
Entry
120867395 CDS
T07255
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03440
Homologous recombination
oda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120867395 (TOP3A)
03460 Fanconi anemia pathway
120867395 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oda03032
]
120867395 (TOP3A)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120867395 (TOP3A)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
120867395 (TOP3A)
DNA replication proteins [BR:
oda03032
]
Eukaryotic type
DNA Topoisomerases
120867395 (TOP3A)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
120867395 (TOP3A)
FA (Fanconi anemia) pathway
120867395 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
120867395
NCBI-ProteinID:
XP_040101763
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MIFPALRRALRGLPRPGARALTRAAMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYHLCGQNVTMVMTSVSGHLLAHDFRMQFRKWQSCNPLVLFEAEIEK
YCPENFVDIKKTLEREARQCQALVIWTDCDREGENIGFEVIHVCKAVKPSLQVLRARFSE
ITARAVQTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVTHDHRDGVVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVKSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLDLAALVEQQIPDPRWGPFARNILERGGPTPRNGNKSDQAHPPIHPT
KYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDV
YPYDRWSDKTLPVYEQGTCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLHQQVQKYKQVFIEAVAKARKLDEALSQYFGAAAEVAPQEALPAVSEPIRKCPQC
GRDMVLKTRKSGGFYLSCTGFPECRSAVWFPDSVLEASRDASVCPVCQPRPVYRLKFKFK
RGSLPPTMPLEFVGCIGGCDETLREILALRFSQGAPRVNQPASQTSGYLQASQSLNRMDS
VQQGQPWPPVTRPSKALTRTLPPPAVESENNSVTCNCGREALLLTVRKEGPNQGRQFYKC
SGGGCSFFLWADSGHPGAGPPSSASRPPGGPLGRPPGSGTLPGGSSRPGSGGSAGASCLC
GQPAVTRTVQKEGPNQGRQFHTCAQPREQQCGFFQWVDENVAPGTFGGPLWPGRRGGTQG
LEARSKRARAGSSDTGSAAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatctttccggccctccgccgcgctcttcgggggctcccgcggcccggtgctcgggcc
ctgactcgcgctgccatggaggtggccctgcgaggggtgcggaaaatcctttgcgtggcc
gagaagaacgacgcggccaagggcatagccgacctgctgtccggcggccgcatgcggcgg
agggaaggactttcaagattcaacaagatctatgagtttgattatcatctgtgtggccag
aacgtcaccatggtaatgacctcagtctcaggacacttgctggcccatgatttccggatg
cagtttcgcaaatggcagagctgcaatcctcttgtcctctttgaagcagaaattgaaaag
tactgcccagagaattttgtagacatcaagaaaactctggagcgagaggcccggcaatgc
caggccctggtgatctggaccgactgtgacagagagggtgaaaacattgggtttgaggtc
atccacgtgtgcaaggccgtgaagcccagcctgcaggtgctgcgagcccgtttctctgag
atcaccgcccgcgccgtccagacggcatgtgaaaacctgacggagcctgaccagagagtg
agcgacgccgtggatgtgaggcaggagttggacctgcggatcggggcggccttcaccagg
ttccagacgctgcggctgcagaagatcttccccgaagtgctggcggagcagcttatcagc
tacggcagctgccagttccccaccctggggttcgtggtggagaggttcaaagccattcag
gcgtttgtgccggaagtcttccacaagatccgagtgactcatgaccacagggacggtgtg
gtggagttcagctggaagaggcatcgtctctttaaccacacggcgtgtctcgttctctac
cagctgtgcatggaggatcccagggcgacagtggtagaggtcaagtccaaagccaagagc
aagtggaggcctcaagctctggacactgtggagctggagaagctggcatctcggaagttg
aggataaatgctaaagaaaccatgaggattgcagaaaagctctacacccaagggtacatc
agctatcctcgaactgaaacgaacattttccccaaagacctagacctggcagcgctggtg
gagcagcagatcccggatccacgctgggggccctttgctcgaaacattctagagcgtggt
ggtcccaccccacgcaatggaaataagtctgaccaagcgcaccctcccatccaccccacc
aaatacactgacagcctgcagggggatgagcagcgactgtacgagctcatcgtccgccac
ttcctggcctgctgctcccaggatgcccagggccaggagaccactgtggagatagacatc
gctcaggagcgcttcgtggcccatggcctcatgatcctggcccggaactatctggacgtg
tacccgtatgatcgctggagtgacaagaccctccctgtctatgagcaaggcacctgcttt
cagcccagcactgtggagatggtggatggggagaccagtcccccccagctgctcaccgag
gctgacctcattgccctcatggagaagcacggcattggtacggacgccacgcacgccgag
cacattgagaccatcaaggcccggatgtatgttgggcttacgccagacaagcgctttctc
cctgggcacctgggcatggggctcgtggaaggctatgactccatgggctacgagatgtcc
aagcctgacctgcgggccgagttggaggctgacctgaagctcatctgtgaggggaagaag
gacaagctggtggtcctgcatcagcaggtgcagaagtacaagcaggtgttcattgaagct
gtggccaaagccaggaagttggacgaggccttgtcccagtacttcggggcggctgcagag
gtggccccacaggaagccctcccggctgtgtctgagcccatcaggaagtgtccacagtgc
ggccgggacatggttctcaagaccaggaagagtggcgggttttacctcagttgcacgggc
ttccctgagtgtcggtcggctgtctggttcccagacagcgtgctggaggccagcagggac
gcgagcgtgtgcccagtgtgtcagccacgccccgtttacagattgaagttcaagtttaaa
cgaggcagcctgcccccaaccatgcccctggaatttgtcggctgcatcggcgggtgtgac
gagaccctgagggagatcctggccctcagattctcacagggcgcccctcgagtcaaccag
cctgccagccagacctccggctacctgcaggctagccagtccctgaacagaatggacagt
gtccagcagggccagccctggccccctgtcaccaggccctcgaaggctttgaccaggact
ctgcccccacccgccgttgagagcgagaacaactcggtgacctgcaactgtggccgagag
gccctgctgctcactgtccggaaggaggggcccaaccaaggccgccagttctacaagtgc
agcggtggtggctgcagcttctttctgtgggctgacagcggccacccgggagctgggcct
ccctcctcggcgtccagacctccaggcggccccttgggacgccccccgggctccgggact
ctcccgggtgggtccagcaggcccggcagtggtggcagcgctggcgcgtcctgcctgtgt
ggccagccggctgtcacacgcaccgtgcagaaggaggggcccaaccagggccgccagttc
cacacatgtgcccagccccgtgaacagcagtgcggcttcttccagtgggtggacgagaac
gtggccccagggactttcggaggccccctctggccaggaagaaggggaggaacccagggg
ctggaggccagaagcaagagggctcgggccggctcctcagacacggggtctgcagccaag
aaaccccggaagtgcagcctttgccaccagcctggacatacccgtcccttctgtcctcag
aacagatga
DBGET
integrated database retrieval system
