Oryx dammah (scimitar-horned oryx): 120867570
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Entry
120867570 CDS
T07255
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03082
ATP-dependent chromatin remodeling
oda04714
Thermogenesis
oda05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120867570 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
120867570 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
120867570 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120867570 (SMARCA2)
03036 Chromosome and associated proteins [BR:
oda03036
]
120867570 (SMARCA2)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120867570 (SMARCA2)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120867570 (SMARCA2)
Chromatin remodeling factors
BAF complex
120867570 (SMARCA2)
PBAF complex
120867570 (SMARCA2)
GBAF(ncBAF) complex
120867570 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120867570
NCBI-ProteinID:
XP_040101888
LinkDB
All DBs
Position
Unknown
AA seq
1572 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHPMHKPMDGMHDKGVEDIHCGSMKGTAMRPPHPGMGPPQSPMDQHSQGYM
SPHPSPLGAPEHVSSPISGGGPTPPQMPSSQPGPLIPGDPQAMNQPNRGPSPFSPVQLHQ
LRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQPPPQPQPQPQPQQPQPQQQALVN
YNRPSGPGPELSGPSPPQKLPVPTPSGRPSPAPPAAAPPPAAAVPGPSVPQPAPGQPSPI
LQLQQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATV
ELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI
EKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKK
RRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLD
AWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQII
ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL
YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS
VVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN
HHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA
MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILY
RHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNG
VINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDG
TTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQ
AILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED
ELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME
EEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYK
DRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN
HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE
EEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE
NEQSEASGTDDE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggcgcgatgccccacccggggccttcgccagggccggga
ccctctcctggacccattcttgggcccagtccaggacccggaccatcccccggttccgtc
cacagtatgatggggccaagtcctgggcctcctagtgtctcacaccctatgccgtcgatg
gggtctgcagacttccctcaggaaggcatgcatccgatgcacaagcccatggatggtatg
cacgacaagggggttgaagacatccattgtggatccatgaaaggcactgctatgcgacca
cctcacccaggaatgggccctcctcagagtccgatggatcagcacagccaaggttacatg
tcgccgcacccgtctccgctgggagccccagagcacgtgtccagccctatatcaggaggc
ggcccgaccccaccacagatgccatcgagccaaccaggacccctcatcccaggcgaccct
caggcgatgaaccaacccaacaggggtccctctcctttcagtccagtccagctgcatcag
ctccgagcccagattttagcttacaagatgctggcccggggccagccccttcccgaaaca
ctgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcaacagccgccgcca
cagccccaaccccagcctcagccgcagcagccacagccgcagcagcaggcccttgttaac
tacaacagaccatctggcccagggccagagctgagcggcccgagccccccgcagaagctg
ccggtgcccacgcccagcggccggccctcacctgcgccccccgccgcagcgccaccgccc
gcggctgccgtgcccggaccctccgtaccgcagccagccccggggcagccctcgcccatc
ctgcagctgcagcagaagcagagccggatcagcccagttcagaaaccgcaaggcctggac
cccgtggagattctgcaggagcgggagtacagacttcaggctcgcatagcccataggata
caggagctggaaaatctgcctggctctttgccaccagacttacgaaccaaagcaaccgtg
gaactgaaagcacttcggttactcaatttccaacgtcagctgcggcaggaggtggtggcc
tgcatgcgacgggacacgaccctggagacggccctcaactccaaagcgtacaagcggagc
aagcgccagaccctgagggaagcccgcatgacggagaagctggagaagcagcagaagatc
gagcaggagcggaagcgaaggcagaagcaccaggaatacctgaacagtattttgcaacat
gcaaaagactttaaggagtatcatcggtctgtggctggcaagatccagaagctttccaaa
gcagtggccacctggcacgccaacaccgaaagggagcagaagaaagagacggagcgcatt
gagaaggagagaatgaggaggctgatggctgaagacgaagagggctatagaaaactgatc
gatcaaaagaaagacaggcgtttagcatacctcttgcagcagactgatgagtatgtggcc
aacctcactaacctggtttgggagcacaagcaagcccaggcggccaaagagaagaagaag
aggaggaggaagaagaagaaggctgaagagaatgcagaaggaggagagtctgctctggga
ccagatggagagcccatagacgagagcagccagatgagtgacctccccgtcaaagtgact
cacacagaaactggcaaggtcctgtttggcccggaagcacccaaagcaagtcagctggac
gcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaagagagt
gattctgattatgaggaggaggatgaggaggaagagtctagcaggcaggaaactgaagag
aaaatacttctggatccaaacagcgaggaggtttcagagaaggacgccaagcagatcatc
gagacagctaagcaagatgtggacgacgagtacagcatgcagtacagtgccagaggctcc
cagtcctactatacagtggcccacgccatctccgagagggtggagaagcagtcggccctc
ctcattaatggaaccctgaagcattatcagctccagggcctggaatggatggtttctctg
tataataacaatttgaacggaatcttagctgatgaaatggggctgggaaagaccatacag
accattgcactcatcacttatctgatggagcacaaacgactcaatggcccctatctcatc
attgttcccctttcgactctatctaactggacgtatgaatttgacaaatgggctccttct
gtggtgaaaatttcttacaagggcacccctgccatgcgtcgctctcttgtcccccagcta
cggagtggcaaattcaacgtcctcctgactacttatgagtacattataaaagacaagcac
attcttgcaaagatccggtggaaatacatgatagtggacgaaggccaccgaatgaagaat
caccactgcaagctgactcaggtcctcaacacgcactacgtggcccccagaaggatcctc
ctgaccgggaccccactgcagaataagctcccggaactctgggccctcctcaacttcctc
ctccccaccatttttaagagctgcagcacattcgagcagtggtttaatgcgccatttgcc
atgactggagagagggtggacttaaatgaagaagaaactatattgatcatcagacgtctg
cataaggtgttgaggcccttcctactgaggaggctgaagaaagaagttgaatctcagctt
ccagaaaaggttgagtatgtgatcaagtgtgacatgtcagctctgcagaagattctgtat
cgccacatgcaagccaaagggatcctcctcacagatggttcagagaaagataagaagggg
aaaggcggtgctaagacactaatgaacaccatcatgcagttgagaaagatctgcaatcac
ccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctattcaaatggg
gtcatcaatggggctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtatt
ctgccaaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacgtccctc
atgaccatcatggaggattactttgcttttcggaacttcctttacctgcgccttgatggt
accaccaagtctgaagatcgtgctgctttgctaaagaaattcaatgaacctgggtcccag
tatttcattttcttgctgagcacaagagctggaggcctgggcttgaatctccaggctgct
gatactgtggtcatcttcgacagtgactggaatcctcatcaggacctgcaggcacaggac
cgcgctcaccgcattggccagcaaaacgaggtccgcgtgctgagactctgcactgtcaac
agcgtggaggagaagatcctcgccgccgccaagtacaagctgaatgtggatcagaaggtg
atccaggcgggcatgtttgatcagaagtcttccagccatgagcggagggccttcctgcag
gccatactggagcacgaagaggaaaatgaggaagaagatgaagtgcccgacgatgagact
ctgaaccaaatgattgctcgacgagaagaggaatttgatctttttatgcgcatggacatg
gaccggcggagagaggatgcccggaacccaaaacgcaagccccgcctgatggaggaagac
gagctgccctcgtggattattaaagatgacgccgaggtggaacggctgacatgtgaagag
gaggaggagaagatcttcgggagggggtctcgccagcggcgggacgtggactacagcgat
gccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaaatggaa
gaggaagtccggcttaagaagcgaaaaagacgaagaaacgtggataaagatcctgcaaaa
gaagatgtggagaaggccaagaagaggagaggtcgccctccagctgagaagctgtcacca
aatccccctaaactgacgaagcagatgaatgctatcattgacactgtgataaactacaaa
gacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaacagt
tcagggcgacagctcagcgaagtcttcattcagttaccttcaagaaaagaattaccagaa
tattatgaattaattaggaaaccggtggatttcaaaaaaataaaggaaagaattcgtaat
cataagtaccggagcctgggtgacctggagaaagacgtgatgctcctctgtcacaatgct
cagacattcaacttggagggatcccagatctatgaagactccatcgtcttacagtcagtg
tttaagagcgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagcaatgaa
gaggaggaagaggaagatgaggaagagtcggagtcagaggcgaaatctgttaaggtgaaa
atcaagctcaataaaaaggatgagaaaggccgggacaaaggaaaaggcaagaaaaggcca
aaccgaggaaaagccaagcctgtggtgagcgattttgacagcgatgaggagcaggatgag
aatgaacaatcagaagccagtgggactgatgatgagtga
DBGET
integrated database retrieval system
