Oryx dammah (scimitar-horned oryx): 120867816
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Entry
120867816 CDS
T07255
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oda04040
]
120867816 (SCN11A)
Ion channels [BR:
oda04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120867816 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
120867816
NCBI-ProteinID:
XP_040102141
LinkDB
All DBs
Position
Unknown
AA seq
1778 aa
AA seq
DB search
MDDRCYPVIFPDGRNFRPFTPDSLAAIKKRIAIQKEKKKSKDWKAAEPEPRPQLDLKVSR
KLPKLYGDIPRDLIAKPLEDLDPFYSNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVITNCVFMALAHQKGSISVSVDNAEYVFLGIYLFEALVKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYINASSFSLSSLRTFRVFRALKAISVIS
GLKVIVGALLHSVKKLVDVMILTLFCLSIFALVGQQLFMGNLSYKCVSNSCNDDYQDYCF
KKEESTEFKMCGVWMGNRACPEQYKCKDSKKNPDYNYTNFDNFGWSFLAMFRLMTQDSWE
KLYRQTVRTSGLISVLFFVVVIFLGSFYLVNLTLAVVTMTYEEQNKNVAAETEAKEKMFQ
EAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGSKKRKSFFLRKSGQDQIPGS
DSDEDSSKKPHLLEQTKRLSQNLSVDHCDEHGDTFQRQRALSAVSILTITMQEQEKSQEP
CLPCGENLASKYLVWDCSPWWLDIKKVLRTVMTDPFTELAITICIIINTVFLAMEHYRMD
QNFENILYTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSVVALLSLADVILNHIV
SGKSSISFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ
LFGSRFNNKKNHLKSCDPEVLCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQETNPR
LCVIVFLSIMVIGKLVVLNLFIALLLNSFSNEERNGHLEGKVKKTKVQVALDRFRWAFCF
VIHTLEHFFRKQCQRQHLSKQKEVTEGPGGESKDIIPLVTGMKKGPEIWEEFGVLTSVPM
TLHDRTWLAPLAEEEDDTESLGEDKGEAVTQPEAGKQASEVHQKSKDLTSPGIQSVEIDV
FSEDDPPMLIQNLRKKSDATSVLSECSTIGPQDPFMRILEMVPKKEPERCLPKGLNCCSL
CCTVDKRKSSWITWWSLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQE
LLKCTDTIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLMGLKSFRI
LRALRPLRALSQFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGRFGRCV
NATDVKSVIDYNIVANRSQCESGNLYWHTPHVNFDNVLMAYLALLQVATFKGWMDIMYAA
VDSTEEGQQPKFEARSCMYLYFVVFIIFGSFFTLNLFTGVIIDNFNQQQKKISGQDVFLT
EEQKKYYNAMKKLGSKKPQRPIPRPQNKCQGFVFDLVTHQVFDIIIIILILLNMLSMMAE
SHDQSATMKHLLECLNLAFVVIFAIECLIKIFALRQYYFTNGWNLFDCVIVVLSIVSTVV
SALETQAEIPFPPTLFRVVRLVRIGRILRLVRAARRIRTLLFALMMSLPSLFNIGLLLFL
VMFIYAIFGMNSFRKVKEDSGIDDIFNFQTFISSMLCLFQITTTAGWDALLSPMLKSNNS
CDPKTESCHLSTIAIIYFVTYIIISSLIVVNMYIAVILENFNVATEESEDPLGEDDFEMF
YEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLHCLDIL
FAFTTRVLGESSGLDSMKAAIEEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKAFRK
YMMKTKCTLKDRPHSTLQTLSNGDLPSSGVAEGKVHYD
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatctttccagatgggaggaatttccgccccttcact
cctgactctttggctgcaatcaagaagcggatcgccatccaaaaggagaaaaagaagtcc
aaagattggaaagcagcagaacctgagcctcgacctcaactcgacctaaaggtctccaga
aagttgcccaagctttatggtgacattccccgtgacctgatagcaaagcccctagaagac
ttggacccattctacagcaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagcgccaaacgtgccttgttcattttggggcctttcaattcaatcagaagt
ttggccattagaatctcagtccattcattgttcagcatgttcatcatctgtactgtcatc
accaactgcgtgttcatggccttagctcatcagaagggcagcatcagcgtgagtgttgac
aatgctgagtatgtcttccttgggatttatttatttgaagcattagttaaaatattggca
agaggttttattctggatgagttttctttcctgcgagatccgtggaactggctggactcc
attgtcattgcaacagcatttgtatcatattctccatatatcaatgccagcagcttcagt
ctgtcatccctgcgtaccttccgagtattcagagctttgaaagcaatttcagtaatttca
ggtttgaaggtcattgttggggccttgctgcactctgtgaagaagcttgtcgatgtgatg
atcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagcttttcatggga
aatctgagctacaaatgtgtcagtaattcctgtaatgatgactatcaagactattgcttt
aaaaaggaagagtccactgaattcaaaatgtgtggcgtgtggatgggcaacagggcttgt
cctgaacaatataaatgcaaagatagcaaaaaaaatcctgactataattacacaaatttt
gacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcctgggag
aagctttatcgacagaccgtgcgtacctcagggctcatctcggtcctcttctttgtggtg
gtcatcttcctgggctctttctacttagttaacttaaccctggctgttgtcaccatgact
tatgaggaacagaacaagaatgtagctgccgaaacagaagccaaggagaagatgtttcag
gaagcccagcagctgttgaaggaggagaaggaggctctggttgccatgggaattgacaga
agttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctatttggt
agtaagaaaagaaaatccttctttttaagaaagtctgggcaagaccagattccaggatca
gattctgatgaagattcttcaaaaaagccacacctccttgagcaaaccaaacgactgtcc
cagaatctgtcagtggaccactgtgatgagcacggagacaccttccaaaggcagagagcc
ctaagtgctgtcagcatccttaccattaccatgcaggaacaagaaaaatcacaggagcct
tgcctcccatgtggggaaaatctggcatccaaatacctcgtgtgggactgtagcccctgg
tggctagacattaagaaggtcctgagaactgtgatgactgatccctttactgagctggct
atcaccatctgcatcataatcaacactgtcttcttggccatggagcattacagaatggac
cagaattttgagaatatattgtacacagggaacttggttttcactggcattttcatggct
gaaatgtgcctaaaaatcattgcactggatccctaccactactttcgtcgaggatggaac
atttttgacagtgttgttgctcttctgagtttggcagatgtgatattaaaccatatagtt
tcaggaaaaagttcaatatcatttcgttctttaagagtgctgagggtcttcaagttagcc
aagtcctggccaacgttaaacacactgattaagatcattggccattctgtcggagccctt
ggaaacctgactgtggtcttggcaattgtggtctttattttctcagtagttggcatgcag
cttttcggctctagattcaataacaaaaagaatcatttaaagtcctgtgaccctgaagtc
ctatgtttacgacgctggcacatgggggatttctaccactcctttttggtggtattccgc
atcctctgtggcgaatggattgaaaacatgtgggaatgtatgcaagaaactaacccaagg
ctgtgcgttattgtgtttctgtcgatcatggtgattggaaaacttgtggtactcaacctc
ttcattgccttgctactcaattccttcagcaatgaggagagaaatggacacttggaagga
aaggtcaagaaaaccaaagtccaggtagccctggatcggttccgctgggctttttgtttt
gtaatacatactcttgagcattttttcaggaaacagtgccagaggcaacatttatcaaag
caaaaagaggtgacagaaggccctggtggagagagcaaagatatcattcccctggtcaca
gggatgaaaaagggcccagagatctgggaggagtttggtgtactaacttctgtaccaatg
accttgcatgatcggacttggttggccccacttgcagaggaagaagatgatactgaatcc
cttggtgaagataagggagaggctgtcacacaacctgaggctggaaaacaggccagtgaa
gtccatcagaagagcaaggatctcactagtccaggaattcagagtgtggaaattgatgta
ttctctgaagatgatcctcctatgttaatacagaatcttcggaagaagtctgatgctacg
agtgtgctctcagaatgtagcaccattggtccacaggatccctttatgcggatacttgaa
atggttcccaaaaaggaaccagagaggtgtttgcccaaaggcctgaactgctgctctcta
tgctgtactgtggacaagagaaagtcctcctggatcacttggtggagcctgcgaaaaacc
tgctaccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctg
agcagtggggcactggtatttgaagatattaaccttgataaacaacccaaaatccaagaa
ttacttaaatgtactgacactattttcacatacatttttatcttggagatgggtctgaaa
tgggtggcctttggatttgggaagtatttcacaagtgtctggtgctggctcgatttcatc
attgtgattgtctctgtgaccagtctcatcgacttaatgggcttgaagtccttccggatt
cttcgagcactgaggcccctgcgagcattgtcccagtttgaaggaatgaaggtggtagtt
tatgctctcataggtgccatacctgctattctgaatgttttgcttgtctgcctcattttc
tggctcatattttgtatcctgggagtaagtctgttttctggaagatttggaagatgtgtt
aatgcaacagatgtaaaatcagttatagattataacattgttgcaaaccggagtcaatgt
gaaagtggaaacctctattggcacaccccgcatgtcaactttgacaatgtgttaatggct
taccttgcgctactgcaagtggcaacatttaagggctggatggatattatgtacgcagct
gttgattccacagaggaaggacaacagccaaagtttgaggcacgttcttgcatgtacctt
tacttcgtagttttcatcatctttggctcattcttcactctgaatctctttactggtgtt
attattgacaacttcaaccaacagcagaaaaagataagtggccaagacgtctttctgaca
gaagaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaacctcaaagg
cccattccaaggcctcagaacaaatgccaaggctttgtctttgacctcgtcacacaccag
gtctttgacatcattatcatcatcctcatcctcctcaacatgctgagcatgatggctgaa
tcacacgaccagtcggccaccatgaaacatttacttgagtgtctcaacctggcctttgtg
gtcatctttgcaatcgagtgtctcatcaaaatctttgctttgaggcaatactacttcacc
aatggctggaatttatttgattgtgtgatcgtggtcctttctattgttagtaccgtggtt
tctgccttggaaacccaggccgagattcctttccctccaacactgttcagagtggttcgc
ttggttcggattggccgaatcctgagacttgttcgagcagcacgaagaatcagaactctg
cttttcgctctgatgatgtccctgccctctctatttaatattggtcttctcctctttctg
gttatgtttatttatgccatctttggtatgaactcttttcgcaaagtgaaggaagattct
ggaattgatgacatcttcaacttccaaactttcataagcagcatgctctgcctcttccag
ataaccacgacggcaggctgggatgccctcctcagccccatgttaaaatcaaataattcc
tgtgaccccaagacagagagctgtcacctctctaccatagccataatctacttcgtcact
tatatcatcatctcctctctcattgtggtcaacatgtatattgctgtgattttagaaaac
ttcaatgtagccactgaagaaagtgaggaccctttgggtgaagatgactttgaaatgttc
tacgaagtctgggaaaagtttgacccagaagcaacacagtttatcaaatattctgccctt
tctgactttgctgatgcccttcctgagcctctgcgtgtggcaaagccaaataaataccaa
tttttagtcatggacttgccgatggtgagtggagatcgtctccattgcttggatattctc
ttcgctttcaccacgagggtactgggtgagtccagtggcctggatagcatgaaagcagcg
atagaggagaagttcatggaggccaaccctttcaagaagttatatgaacccatagtcacc
accaccaaaaggaaggaagaggaaaggtgtgctgctgttattcaaaaggcctttcgaaag
tacatgatgaagaccaagtgtaccttgaaagacaggcctcattcaaccctccagacactt
tccaatggagacttacccagctctggggtggctgagggcaaggtccattatgactga
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integrated database retrieval system
