Oryx dammah (scimitar-horned oryx): 120867865
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Entry
120867865 CDS
T07255
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
120867865 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120867865 (TRIM71)
04121 Ubiquitin system [BR:
oda04121
]
120867865 (TRIM71)
Enzymes [BR:
oda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120867865 (TRIM71)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120867865 (TRIM71)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120867865 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
CRLF3_N
COG5_N
Motif
Other DBs
NCBI-GeneID:
120867865
NCBI-ProteinID:
XP_040102248
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGGGAPGESLKLRCPVCDQKVVLAEAAGMDALPSSSFLLSN
LLEAVVATADEPPPKNGRAGAAAGAGGHGSNHRHHAXXXXXXXXAPPPPLPPAPPPPAPP
RSAPGGPAGSPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHY
IERGPPGPAAAAAVAAAQQLGLGPPFPGAPFSLLSVFPERLGFCQHHDDEVLHLYCDTCS
VPICRECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVE
MKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLEST
ISAVQQVLEEGRALDILLARDRMLAQAQELKAVRSLLQPQEDDRVMFTPPDQALYLAIKS
FGFVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGN
LFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGL
SFGSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFD
RPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKI
LVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVI
HPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQ
GSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtcggcgtcgtcgtcatcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccccggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggcgggcggc
ggcggcggcgcgccgggagagtcgctcaagctgcgttgccccgtgtgcgatcagaaggtc
gttctggccgaggcggcgggcatggacgcgctgccttcgtcctccttcctgctaagcaac
ctgctcgaagccgtggtggccacggccgacgagccgccgccgaagaacgggcgggccggc
gccgcggcgggcgcgggcggccacggcagcaaccaccggcaccacgcnnnnnnnnnnnnn
nnnnnnnnnncggcgccgccgccgccgctcccgcccgcaccgccgccgcccgcgccgccc
cgctcggctcccggcggccccgcaggctccccgtcggcgctgctgttgcgccggccccat
ggctgcagctcctgcgacgagggcaacgcggcctcgtcgcgttgcctcgactgccaggag
cacctgtgcgacaactgcgttcgcgcgcaccagcgcgtgcgcctcaccaaggaccactac
atcgagcgcggcccgcccggccccgccgcagccgccgccgtagcggcggcgcaacagctc
gggctcgggccgcccttcccaggcgctcccttctccctcctctccgtcttcccggagcgc
ctcggcttctgccagcaccacgacgacgaggtgctgcacctgtactgcgacacgtgctct
gtgcccatctgccgcgagtgtacggtgggccggcacggcggccacagcttcgtctacctc
caagaggcgctgcaggactcgcgggccctcaccatccagctgctggccgatgcccagcaa
ggccgccaggccatccagctgagcatcgagcaggcccagacggtggcagagcaggtggag
atgaaggcaaaggtggtgcagtcggaggtcaaagctgtgactgcaagacacaagaaagcc
ctggaggagcgggagtgtgagctgctgtggaaggtagagaagatccgccaggtgaaggcc
aagtcactgtacctgcaggtggagaagctgcggcagaacctgaacaagctggagagcacc
atcagcgccgtccagcaggtcctagaggagggccgggcgctggacatcctgctggcccgg
gaccgcatgctggcccaggcacaggagctcaaggccgtgcgcagcctcctgcagccccag
gaggatgaccgggtcatgttcacaccccctgaccaggccctgtatctcgccatcaagtcc
ttcggcttcgtcagcagcggggccttcgcgccactcaccaaggccacgggcgatggcctc
aagcgggccctgcagggaaaggtggcctccttcaccgtcatcggctacgaccacgacggg
gagccacggctgtcggggggtgacctcatgtcggccgtggtcctgggccccgatggcaac
ctgttcggcgcggaggtgagcgaccagcagaacgggacgtacgtggtgagctaccggcca
caactggagggggagcacctggtgtccgtcaccctgtgcaaccagcacatcgagaacagc
cccttcaaggtggtggtcaagtctggccgcagctacgtgggcattgggctccccggcctg
agcttcggcagcgagggcgacagcgacggcaagctctgccgcccgtggggcgtgagcgtg
gacaaggagggctacatcgtggtggccgaccgcagcaacaaccgcatccaggtgttcaag
ccgtgcggcaccttccaccacaagttcggcacgctgggctcccggccggggcagttcgac
cggcctgccggggtggcgtgcgatgcctcccgcaggatcgtggtggccgacaaggacaat
catcgcatccagatcttcaccttcgagggccagttcctcctcaagttcggggagaagggc
accaagaacgggcagttcaactacccctgggacgtggcggtgaattccgagggcaagatc
ttggtctcagacacgcggaaccaccgcatccagctgttcgggcccgacggggtcttcctg
aataagtacggcttcgagggggctctctggaagcactttgactccccgcggggcgtggct
ttcaaccacgagggccacttggtggtcaccgacttcaacaaccaccggctcctggtcatc
cacccggactgccagtcggcccgcttcctgggctccgagggcacgggcaacgggcagttc
ctgcggccgcagggcgtggctgtggatcaggaggggcgcatcatcgtggccgactccagg
aaccaccgggtgcagatgttcgaggccaacggcagcttcctgtgcaagttcggcgcccag
ggcagcggcttcgggcagatggaccggccctccggcatagcggtcacgccggacgggatg
atcgtcgtggtggactttggcaacaatcgaatcctcatcttctaa
DBGET
integrated database retrieval system
