Oryx dammah (scimitar-horned oryx): 120867925
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Entry
120867925 CDS
T07255
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120867925 (PDZRN3)
Enzymes [BR:
oda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120867925 (PDZRN3)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
120867925 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
120867925
NCBI-ProteinID:
XP_040102315
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQMVDTGTQT
DITFEHIMALSKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIAGIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSAG
PYGLYYPGSTLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQFREPWM
LHNSGFRNYNTSVDVRRRELADITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RAAEGEGAAEAYGPSPKNLLSITEDSEGGSPNYSPSPKELDPSPAPENKERKPSEDGGGS
SGSPTPGANLGGSYLPPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSM
CKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVS
ELKMGRYWSKEERKQHVVRAKEQRRRRELMMQSRLDCLKEQQAADDRKEMNILELSHRKM
MKKRNRKILDNWMTIQELLTHGAKSPDGTRVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgctctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgtgtgctgccctgggtggtgcaggagggcagttgcccggcgcgctgccgcggtcgcctc
tcggccaaggagctcaaccacgtcctgccgctcaagcgccttatcctcaagctggacatc
aagtgcgcgcatgcggcgcgcggctgcggccgggtggtcaagctgcaacagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgagacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacacacggcgagcagcgcgccggaggccac
tgctgtgcacgggccctgcgggcgcacaacgccgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgggccggcaagcgcgagaagtccctggtggcg
cagctggccgccgcacagctggagctgcagatgaccgctctgcgctaccagaagaagttc
accgagtacagcgcgcgccttgactcgcttagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaacaaaaagcctgactcttgtcctgcatcgggattctggctccttggga
ttcaacatcattggtggccggccgtgtgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggacggaggcctgcaaatt
cacgacaggattattgaggtcaatggcaaagacttatccagagcaactcacgaccaggct
gtggaagccttcaagacagccaaggaacccatcgtggtccaggtgttgaggagaacaccg
cggaccaaaatgttcactcctccatcagagtcacagatggtggacacgggaacacagaca
gacatcacctttgagcacatcatggccctgagcaagatgtcctcgcccaccccgcctgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactatgatccaaac
gactacatcgcaggcatccatcaggagatggacagggaggagctggagctagaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcacggtgtgctaccggacagat
gatgaagacgacattggcatctatataagcgagatcgaccctaacagcatcgcggccaaa
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggctgtagctctgctaaccagtgaagaaaacaagaacttctcattgctaatt
gccaggcctgaactccagctggacgagggttggctggatgacgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcacagcc
agcgtcctgcagcagaagaagcacgaggaagacgggggaaccacagacacggccaccatc
ctgtccaaccagcatgagaaagacagcggcgtgggccggacagacgagagcacgcgcaac
gacgagagctcggagcaggagaacaacggcgacgatgcccccgcagcctccccgccgctg
gccgggcagaggaagctcacttgcagccaggacaccctgggcagcggcgacctgcccttc
agtaacgagtccttcatctccgccgactgcgccgacgccgactatctgggcatccccgtg
gacgagtgcgagcgcttccgcgagctgctggagctcaagtgccaggtgaagagtgccggc
ccctacggcctctactaccccggcagcaccctggacgccagcaagagcgaccccgagagc
gtggacaaggagctggagctgctcaacgaggagctgcgcagcatcgagctggagtgcctc
agcatcgtgcgcgcgcacaaaatgcagcagctcaaggagcagttccgcgagccctggatg
ctgcacaacagcggcttccgcaactacaacaccagcgtggacgtgcgcaggcgcgagctc
gccgacatcaccgagctgcccgagaagtccgacaaagacagctcgagcgcctacaacacc
ggcgagagctgccgcagcaccccactcaccttggagatgtcccccgacaactccctgcgg
agggcggccgagggtgaaggtgccgcggaagcttacgggccgtcccccaagaacctgctc
tccatcacagaagattccgaggggggctccccgaactacagcccttcccctaaggagctg
gatcccagcccggctccggagaacaaagagaggaagcccagcgaagacggtggtggcagc
agcgggagccccacccccggcgcgaatctgggaggctcatacctgccgcccttcccgcac
tcgccctacaagcacgcccacatccccgcgcacgcgcagcactaccagagctacatgcag
ctgatccagcagaagtcggccgtcgagtacgcgcagagccagatgagcctggtgagcatg
tgcaaggacctgaactcagccaaccagtcggagccgaggatggagtggaaggtgaagatc
cgcagcgacggcacgcgctacatcaccaagcggccggtgcgggatcgcctgctgcgggag
cgtgcgctcaagatccgcgaggagcgcagcggcatgaccacggacgacgatgcagtgagc
gagctgaagatggggcgttactggagcaaggaggagaggaagcagcacgtggtgagggcc
aaggagcagaggcggcggcgcgagctcatgatgcagagccggctcgactgcctgaaggag
cagcaggcggccgacgacaggaaggagatgaacatcctcgagctcagccacagaaagatg
atgaagaagaggaacagaaagatacttgataactggatgacaatccaagaactcttaacc
cacggtgccaaatcgccagacggcactagagtatacaattccttcctctcggtgaccact
gtataa
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integrated database retrieval system
