Oryx dammah (scimitar-horned oryx): 120868199 Help Entry 120868199         CDS       T07255                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism oda  Oryx dammah (scimitar-horned oryx) Pathway oda03082   ATP-dependent chromatin remodeling oda04714   Thermogenesis oda05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:oda00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     120868199 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     120868199 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     120868199 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oda03021]     120868199 (SMARCC1)    03036 Chromosome and associated proteins [BR:oda03036]     120868199 (SMARCC1) Transcription machinery [BR:oda03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      120868199 (SMARCC1) Chromosome and associated proteins [BR:oda03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     120868199 (SMARCC1)    PBAF complex     120868199 (SMARCC1)    GBAF(ncBAF) complex     120868199 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 BRCT_2 Chromo DUF919 SpeFL Motif Other DBs NCBI-GeneID:  120868199 NCBI-ProteinID:  XP_040102824 LinkDB All DBs Position Unknown AA seq 1105 aa AA seqDB search MAAAAGGGGLGTTTGAAGAGGAAAATGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG KHYKKYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLARPNIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG KEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK METDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKEAEENKE LTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGPNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLIHHQMPPPHPPQPGQIPGP GSMMPGQPMPGRMMPTVAASIHPPGSGPTPPGMPPIPGNILGPRVPLTAPNGLYPQPPQQ QPPPPAPADGGPPPPAPGPPASAAP NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atggccgcggcggcgggcggcggagggctggggacgacgaccggcgccgcgggcgcagga ggcgcggcggcggccacgggcctggccgtttatcggcggaaggacgggggcccggcgagc aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc aagcattacaagaagtatgttcacacggatgctcctacaaataaaacactggctgggctg gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccagct ttcaccaagctcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac attcttggggctgcgtacaaatacaaaaatgaacagggatggcggaggtttgatctgcag aatccatcacgaatggatcgtaatgttgaaatgtttatgaacattgaaaaaacattggtt cagagcaattgtctggccagacccaacatctacctcattccagacattgatctgaagttg gctaacaaattgaaagatataatcaaacgacatcagggaacatttactgatgagaagtca aaagcttcccaccacgtttatccatatccttcctcacaagaggatgaagagtggttgaga cctgtgatgagaaaagacaagcaggtgttggtgcactgggggttttaccctgacagttat gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccgattccagaa aaaccatggaaggttcatgcaaaatggattttggacactgatgttttcaatgaatggatg aatgaggaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt tcaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct aatgctcgaaaaaggaaacattcaccttcccctccacccccgacacccacagaatcccgg aagaagagtgggaagaaaggccaagctagtctttatgggaagcggagaagtcagaaagag gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacccaacata gaggaagtggttcttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgtt aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacgacaggagga aaggaagatgaagatcctggcaaaggtgatcagagtagatccgttgaccctggtgaagat aatgtgactgagcagaccaatcacattattattcctagctatgcatcgtggtttgattat aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa tccaagaccccagagatatacttggcatatcgaaatttcatgattgacacataccgccta aatccccaagaatatttaaccagcactgcttgtcggaggaacttaactggagatgtgtgt gctgtgatgagggttcatgcctttttagaacagtgggggcttgttaattaccaagtggat ccagaaagtcgacccatggcaatggggcctcctccaactcctcatttcaatgtgttagct gataccccttcggggcttgttcctctacatcttcgatcacctcagattcctgctgctcag cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt cttcgtactgacatctactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga agagaatggactgaacaggagactctgctactcttggaggctctggagatgtataaagat gattggaacaaagtgtcagaacacgttggaagtcgcactcaggatgaatgcatcctccac ttcttgaggcttcccattgaggacccataccttgagaattctgatgcttccctggggccc ctggcctaccagcctgtccccttcagtcagtcaggaaacccagtcatgagcactgttgct tttttggcctctgtggtggatcctcgtgtggcatctgctgcagccaaagcagctttggag gagttttctcgggtccgggaggaggtgcccctggaattggtggaggctcatgtcaagaaa gttcaagaagcagcccgagcctccgggaaggtggatcccacctacggcctggagagcagc tgcattgcaggcacggggccagatgagccagagaagctggaaggagctgaagaggaaaaa atggaaacagatactgatgctcagcagcctgaaaaggcagaaaacaagggggaaaatgaa acagatgaaggtgataaagcacaagatggagaaaatgaaaaaaacagtgaaaaggaacag gatagtgaagttagcgaggataccaaatcagaagaaaaggaggctgaagagaacaaggaa ctcactgattcttgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaa atttctgaaggaaacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaa gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtagctcttctggtt gagacacaaatgaagaaactggagattaaacttcgacattttgaagaactagaaactatc atggacagagagaaagaagctttagaacaacagagacagcagttgcttacagagcgccag aacttccacatggagcagctgaaatatgctgagttgcgagcccgacagcaaatggaacag cagcagcacgggccgaaccctcaacaggcacaccagcactcaggaggacctggcctggcg ccgctgggagcagcgggacatcccggcatgatgcctcatcagcagccccctccctaccct ctgatccaccaccagatgccgccgcctcatccaccccagccaggtcagataccaggccca ggttccatgatgcctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagc atccacccccctgggagtggccccacccctcctggtatgcctccaatcccaggaaacatc ttaggaccccgcgtacccctcacggcacctaacggcttgtatccccagccgccacagcag cagccaccaccgccagcacctgcggacggaggccctccaccccccgctcctggcccacca gcctcagctgcgccctag

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