Oryx dammah (scimitar-horned oryx): 120868456
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Entry
120868456 CDS
T07255
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120868456 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120868456 (DHX36)
03012 Translation factors [BR:
oda03012
]
120868456 (DHX36)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120868456 (DHX36)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120868456 (DHX36)
Translation factors [BR:
oda03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120868456 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
PhoH
AAA_14
ATPase
AAA_34
NPHP3_N
ResIII
AAA_23
DUF6782
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120868456
NCBI-ProteinID:
XP_040103211
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGSYGGGHGGNRGSGGGGGGGGGRGGRGRHPGHL
KGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQTKNDKDEEAQISWF
APEDHGYGTEAPAENKPNSVKNVEHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDA
TLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIENHQVTVISGETGCGKTT
QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS
RLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRP
DLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQF
KKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQRYSASTVDVIEVMDDEKVDLNLIAAL
IRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFK
RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ
RKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRL
MDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV
LTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEK
DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAG
LYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIY
LYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQ
EKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKATPRNLPPRFQDGYYS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggtggcccccgcagctctggcggg
ggttacggaggaagctatggaggcagctatggaggaggccatggggggaaccgaggctcg
ggaggtggcggcggcggagggggtggtcgaggcggccgaggccgacatcccggacacctg
aaaggccgcgaaatcggcttatggtacgcgaagaaacaaggccagaagaacaaggaagca
gagaggcaggagagagctgtagtacatatggatgaacgtcgagaagaacaaattgtgcag
ctgctacattctgtgcaaactaagaatgataaagatgaagaagcacagatatcctggttt
gctcctgaagatcatggatacggtactgaagctcctgctgagaacaaaccaaattcagta
aagaatgttgagcatcaagaaaaaaaaatgataaatcaagaaaagaggccgtttagaatc
agggacaaatacattgatcgtgattctgaatatctcttgcaagaaaatgaaccagatgca
actctagaccaacaattattggaagatttacaaaagaaaaaaactgaccttcggtatatt
gaaatgcagcgtttcagggaaaagctgccgtcatatggaatgcaaaaggaattggtaaat
atgattgaaaaccatcaggtaacagtgataagtggtgaaaccggttgtggaaaaaccact
caagttactcagttcattttggacaactacattgaaagaggaaaagggtctgcttgcagg
atagtttgtactcagccaagaagaattagtgccatttcagttgcagagagagtggctgca
gaaagggcggaatcttgtggcaatggtaatagtactggataccaaattcggctccagagt
cgattgccaaggaaacaaggttctatcttatattgtacaacaggaatcatccttcagtgg
cttcagtcagacccccatctgtccagtgttagtcatattgtgcttgatgaaatccatgag
agaaatctacagtcagatgttttaatgactgttgttaaagatcttctcagttatcgacct
gacctgaaagtagtattgatgagtgcaacattgaatgctgagaaattttccgaatatttt
ggtaactgtccaatgatacatatacctggctttacttttccggttgtggagtatcttttg
gaagatataattgaaaaaataagatatgttccagaacaaaaagaacacagatcccagttt
aagaaaggtttcatgcaagggcatgtgaatagacaagaaaaagaagaaaaagaagcaatc
tataaagaacgctggccaggttatctaagggaattgagacaaaggtattctgcaagcact
gtagatgttatagaagtgatggatgatgaaaaagttgatctgaatttgattgctgccctt
attcgatacattgttttggaagaagaggatggtgcaatattggtctttctaccaggctgg
gacaacatcagcactttacacgatctcttgatgtcacaagtgatgtttaaatcagacaag
tttattattatacctttacattctctgatgcctacagttaaccagacacaggtgtttaaa
agaactcctcctggtgttcggaaaatagttattgctaccaacattgcagagactagcatt
accattgatgatgtagtttatgtaatagatggaggaaaaataaaagagacgcactttgac
acacagaacaacatcagtacaatgtctgctgagtgggttagtaaagctaacgctaaacag
aggaaaggtcgagctggaagagttcaacctggtcattgctatcatctatataacagtctt
agagcaagccttctagatgactatcaactgccagaaattttaagaacgcctttggaagaa
ctttgtttacagataaagattttaagactaggtggaattgctcactttcttagtaggcta
atggatccaccatcgaatgaagcagtgttactctccataaaacacctgatggaactgaat
gctttggataaacaagaagaattgacgcctcttggagttcacttggcacgattaccagtt
gaaccacacattgggaaaatgattctttttggagctctgttctgttgcttagacccagta
ctcaccattgctgctagtctcagcttcaaagatccctttgtgattccactgggaaaagaa
aaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaaagtgaccacctgact
gttgtgaatgcatttaagggatgggaaaaagctaaacaacgtggtttcagatatgaaaaa
gactattgctgggaatattttctatcttcaaacacattgcagatgctgcataacatgaaa
gggcagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctcaagat
ccagaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgctggt
ttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatggtgaaa
gtttacacaaaaactgatggagtagttgctattcatcctaaatctgttaatgtggagcaa
acagagtttaactacaactggcttatctatcatctgaagatgaggacaagtagtatatac
ttgtatgactgcacagaagtttccccatactgtctgttgttctttggaggtgatatatcc
atccagaaagataatgatcaggaaactattgctgtagatgagtggataatctttcagtct
ccagcaagaattgcccatcttgttaaggaattaagaaaggaactagatatccttctgcaa
gagaagattgaaagtccccatcctgtagactggaaggacactaaatcaagagactgtgca
gtactctcagctattatagacttgatcaaaacacaagaaaaagcaactcccaggaacttg
ccaccacgtttccaggatggatattacagctga
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