Oryx dammah (scimitar-horned oryx): 120868814
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Entry
120868814 CDS
T07255
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04151
PI3K-Akt signaling pathway
oda04510
Focal adhesion
oda04512
ECM-receptor interaction
oda04820
Cytoskeleton in muscle cells
oda04974
Protein digestion and absorption
oda05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120868814 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120868814 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120868814 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120868814 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
120868814 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
120868814 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oda00535
]
120868814 (COL9A3)
Proteoglycans [BR:
oda00535
]
Extracellular matrix (ECM) proteoglycans
Others
120868814 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120868814
NCBI-ProteinID:
XP_040103613
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All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAGAPTLALLLLGQLLAATVTLTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGP
AGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGIPGMSGPSGEP
GMPGKDGRDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEA
GPSGEPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSIGDPGLPGPQ
GLRGGVGDRGLGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTSGVDGVPGPPGPVGLQGVRGVPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDAGLPGAVGAQGPPG
ICDTSACQGAVMAAVGEKSGPRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcccccaccctggccctgctgctgctggggcagctgctggccgccaccgta
accttgaccgaggcacagaaagtgggacctcgaggcccccctggtccccaagggccacct
gggaagccaggcaaggatggcattgatggagaagttggtcctcctggtcttcctgggccc
gcgggaccaaaaggggccccagggaagccagggaaaccaggagaggccgggctgcctgga
ctgcctggcgtggatggtctgactgggcaggatggacctcctggacccaagggcgctccc
ggagaacggggaagtctgggacccccagggccacctgggctggggggcaaaggcctccct
ggacctcctggagaggcaggggtgagcggcctcccaggtggaattggcctccgggggccc
ccgggaccctcaggactcccaggcctccctggacccccaggacctcctggcccccctggt
cacccaggggtgcttcccgaaggtgctactgatcttcagtgcccggccatctgcccgcca
ggccccccagggcccccaggaatgccagggttcaagggacccaccggatacaaaggggag
cccggagaagtcggcaaggatggcgaaaagggtgaccccggcccccctggaccccctggt
atcccgggcactgtggggttgcagggtccacggggcctacgaggacttccagggccactc
ggaccccctggggaccggggtcccattggattccgagggccccccgggatcccaggagcc
cctgggaaagcgggcgacagaggagagaggggcccagaggggttccgcggccccaagggc
gaccttggcaggcctggtcctaaaggcatccccggcatgtctgggcccagtggagagccg
ggcatgccaggcaaggacggccgggatggcgtgccaggactcgatggcgagaagggagaa
gctggtcgccacggcgccccgggagagaaggggcccaacgggctaccgggtctccccgga
cgagcagggtccaagggtgagaaaggagaactgggcagacctggagagctgggcgaggcc
ggcccctcgggagagcctggtgtccctggagatgttggcatgcccggcgagcgtggagag
gctggacacaggggctcagcgggggcactgggcccgcaagggccccctggggcccctggc
gtccgtggcttccagggccagaagggcagcataggagaccctggcctgccgggcccccaa
ggcctccgaggtggcgtgggcgaccggggcctgggaggagctgccggccccaagggcgac
cagggcatcgcgggtgctgacggccttcctggggataaaggagaactgggtcccagcggc
cctgttggccccaaaggagagtccggcagtcgcggggaactgggccctaagggaatccag
ggccccaacggcaccagcggcgtagatggcgtccctggcccccctggccccgtgggcctc
cagggcgtgcgaggcgtgcccggcatcactggaaaacctggggtcccggggaaagaagcc
agcgagcaacacatcagggagctgtgcggggggctggtcagcgagcaaatcgcgcagctg
gccgcgcacctgaggaagcccctagcaccaggctccatcgggcgcccaggtcctgctggc
cccccagggcccccagggcccccgggctccattggtcaccccggggctcgagggccccct
ggataccgaggtcccacaggagagcttggagaccctggacccagaggaaaccagggtgac
agaggagacaaaggctcagctggcgagggcctggatgggcctgacggagaccaagggctg
caaggaccgcaaggcgtgcccggcatcagcaaagatggccgagatggggctcacggtgag
cctgggctccccggcgatgctggccttcctggtgccgtcggcgctcaggggcctcctggc
atctgcgacacctccgcctgccaaggagccgtgatggcagctgtcggggagaagtcaggt
ccccggagctcctaa
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