KEGG   Oryx dammah (scimitar-horned oryx): 120868814
Entry
120868814         CDS       T07255                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda04151  PI3K-Akt signaling pathway
oda04510  Focal adhesion
oda04512  ECM-receptor interaction
oda04820  Cytoskeleton in muscle cells
oda04974  Protein digestion and absorption
oda05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:oda00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    120868814 (COL9A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120868814 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120868814 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120868814 (COL9A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    120868814 (COL9A3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    120868814 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:oda00535]
    120868814 (COL9A3)
Proteoglycans [BR:oda00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   120868814 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 120868814
NCBI-ProteinID: XP_040103613
LinkDB
Position
Unknown
AA seq 684 aa
MAGAPTLALLLLGQLLAATVTLTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGP
AGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGIPGMSGPSGEP
GMPGKDGRDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEA
GPSGEPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSIGDPGLPGPQ
GLRGGVGDRGLGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTSGVDGVPGPPGPVGLQGVRGVPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDAGLPGAVGAQGPPG
ICDTSACQGAVMAAVGEKSGPRSS
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggccggagcccccaccctggccctgctgctgctggggcagctgctggccgccaccgta
accttgaccgaggcacagaaagtgggacctcgaggcccccctggtccccaagggccacct
gggaagccaggcaaggatggcattgatggagaagttggtcctcctggtcttcctgggccc
gcgggaccaaaaggggccccagggaagccagggaaaccaggagaggccgggctgcctgga
ctgcctggcgtggatggtctgactgggcaggatggacctcctggacccaagggcgctccc
ggagaacggggaagtctgggacccccagggccacctgggctggggggcaaaggcctccct
ggacctcctggagaggcaggggtgagcggcctcccaggtggaattggcctccgggggccc
ccgggaccctcaggactcccaggcctccctggacccccaggacctcctggcccccctggt
cacccaggggtgcttcccgaaggtgctactgatcttcagtgcccggccatctgcccgcca
ggccccccagggcccccaggaatgccagggttcaagggacccaccggatacaaaggggag
cccggagaagtcggcaaggatggcgaaaagggtgaccccggcccccctggaccccctggt
atcccgggcactgtggggttgcagggtccacggggcctacgaggacttccagggccactc
ggaccccctggggaccggggtcccattggattccgagggccccccgggatcccaggagcc
cctgggaaagcgggcgacagaggagagaggggcccagaggggttccgcggccccaagggc
gaccttggcaggcctggtcctaaaggcatccccggcatgtctgggcccagtggagagccg
ggcatgccaggcaaggacggccgggatggcgtgccaggactcgatggcgagaagggagaa
gctggtcgccacggcgccccgggagagaaggggcccaacgggctaccgggtctccccgga
cgagcagggtccaagggtgagaaaggagaactgggcagacctggagagctgggcgaggcc
ggcccctcgggagagcctggtgtccctggagatgttggcatgcccggcgagcgtggagag
gctggacacaggggctcagcgggggcactgggcccgcaagggccccctggggcccctggc
gtccgtggcttccagggccagaagggcagcataggagaccctggcctgccgggcccccaa
ggcctccgaggtggcgtgggcgaccggggcctgggaggagctgccggccccaagggcgac
cagggcatcgcgggtgctgacggccttcctggggataaaggagaactgggtcccagcggc
cctgttggccccaaaggagagtccggcagtcgcggggaactgggccctaagggaatccag
ggccccaacggcaccagcggcgtagatggcgtccctggcccccctggccccgtgggcctc
cagggcgtgcgaggcgtgcccggcatcactggaaaacctggggtcccggggaaagaagcc
agcgagcaacacatcagggagctgtgcggggggctggtcagcgagcaaatcgcgcagctg
gccgcgcacctgaggaagcccctagcaccaggctccatcgggcgcccaggtcctgctggc
cccccagggcccccagggcccccgggctccattggtcaccccggggctcgagggccccct
ggataccgaggtcccacaggagagcttggagaccctggacccagaggaaaccagggtgac
agaggagacaaaggctcagctggcgagggcctggatgggcctgacggagaccaagggctg
caaggaccgcaaggcgtgcccggcatcagcaaagatggccgagatggggctcacggtgag
cctgggctccccggcgatgctggccttcctggtgccgtcggcgctcaggggcctcctggc
atctgcgacacctccgcctgccaaggagccgtgatggcagctgtcggggagaagtcaggt
ccccggagctcctaa

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