Oryx dammah (scimitar-horned oryx): 120868875
Help
Entry
120868875 CDS
T07255
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04140
Autophagy - animal
oda04148
Efferocytosis
oda05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120868875 (VPS16)
04148 Efferocytosis
120868875 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120868875 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120868875 (VPS16)
Membrane trafficking [BR:
oda04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120868875 (VPS16)
Hops complex
120868875 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
120868875
NCBI-ProteinID:
XP_040103731
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKPA
SARPVLEIYSASGVPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTVCQDRVAHILLAVGPDLYLLDHAACSVVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKEKAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDGFVR
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILSGQNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacaccgcgaactggaacccactcggggactctgctttttaccggaaatat
gagctgtatagcatggactgggacctgaaggaggaactgagggactgcctagtggctgct
gcaccctatgggggccccattgcactgctgaggaacccctggcggaaggagaagcccgcc
agtgcccggccggttctcgagatctactcagcttccggggtgcctctggccagtctgttg
tggaagagtgggcccgtggtatccctgggctggtcagctgaggaggagctgctctgcgtg
caggaagacggagttgtgctggtttacgggctgcatggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggatgcccggatcttccatactgagttt
ggttctggggtggccatcctcacaggagcccaccgcttcaccctcagtgccaacgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctgcagagtgcaccctcatgctgg
accacagtgtgccaggaccgagtggcgcacattctcctggctgtagggcctgatctttac
ctcctggaccatgcggcctgctctgtggtgacaccccctggcctggccccaggagtgagc
agcttcctgcagatggctgtgtccttcacctacagacacctggcgctcttcacagacaca
ggctacatctggatggggacagcatctctcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgtagccgtccgcgcagcaaggagaaagct
gttgtggtggcctgggagaggcggctaatggtggtgggcgatgcacctgagagcatccag
ttcgtgctagatgaggactcctacctggtgcctgagctggatggggtccgaatcttctcc
cgcagtacccatgagttcctgcatgaggttccagtggccagtgaggagatctttaaaata
gcctcgatggcccctggagcactgttgttggaggctcagaaagaatatgagaaagagagc
cagaaggcggatgagtacctgcgggagatccaggagctggggcagctgccccaggctgtg
cagcagtgcatcgaggctgcaggacacgagcactggccagatatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctggacagatttccgcctgacggctttgtgcgc
atgtgtcaggaccttcgtgtactcaatgccgttcgggactatcacatcggaatccccctc
acctatagccaatacaagcagctcactatccaggtgttgctagacaggcttgtgttgcgg
aggctttaccccctggccattcagatatgtgagtacctgcggcttcctgaagtgcagggc
gtcagcagaatcctggcccactgggcctgctacaaggtgcaacagaaagatgtgtctgac
gaggatgttgctcgggccattaatcagaagctgggggacacacctggtgtctcctactct
gacattgctgcacgagcctatggctgtggccgcacggagctagccatcaagctgctggaa
tatgagccacgctctggggagcaagttccccttctcctgaagatgaagaggagcaaactg
gcactaagcaaggccatcgagagtggggatactgatctggtgttcacagtgctgctgcac
ctgaagaatgagctgaaccgaggagattttttcatgacgcttcggaaccagcctatggcc
ttaagtttgtaccgacagttctgtaagcatcaggagctggagacgctgaaggacctttac
aaccaggatgacaaccaccaggagctgggcagcttccacatccgagccagctatgctgca
gaggagcgaattgaggggcgagttgcagctctacagacggcagccgacgccttctacaag
gccaagaatgagtttgcagccaaggctacagaggatcagatgcggctcctacggcttcag
cgacgcctagaagatgagctggggggccggttcttagacctgtctctacatgacacagtc
accaccctcattctcagtggccaaaacaagcgcgcggagcagctggcacgtgactttcgc
atccctgacaagaggctctggtggctgaagctgactgccctggcagatttagaagactgg
gaggagctagagaagttttctaagagcaagaaatcacccattggctacctgccctttgtg
gagatctgcatgaagcaacacaataaatatgaggccaagaagtatgcttcccgcgtgggt
cctgagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggctgcggatgtt
gccattgagcaccggaatgaggcggagatgagcctcgtattgtcccactgcactggagcc
acagatggggctacggccgacaagattcagcgggcccgggcacaagcccagaagaaatga
DBGET
integrated database retrieval system
