Oryx dammah (scimitar-horned oryx): 120869850
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Entry
120869850 CDS
T07255
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03320
PPAR signaling pathway
oda04659
Th17 cell differentiation
oda04919
Thyroid hormone signaling pathway
oda04920
Adipocytokine signaling pathway
oda04928
Parathyroid hormone synthesis, secretion and action
oda05200
Pathways in cancer
oda05202
Transcriptional misregulation in cancer
oda05207
Chemical carcinogenesis - receptor activation
oda05216
Thyroid cancer
oda05222
Small cell lung cancer
oda05223
Non-small cell lung cancer
oda05226
Gastric cancer
oda05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
120869850 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120869850 (RXRB)
03320 PPAR signaling pathway
120869850 (RXRB)
04919 Thyroid hormone signaling pathway
120869850 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
120869850 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120869850 (RXRB)
05202 Transcriptional misregulation in cancer
120869850 (RXRB)
05207 Chemical carcinogenesis - receptor activation
120869850 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
120869850 (RXRB)
05216 Thyroid cancer
120869850 (RXRB)
05222 Small cell lung cancer
120869850 (RXRB)
05223 Non-small cell lung cancer
120869850 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
120869850 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120869850 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oda03310
]
120869850 (RXRB)
Transcription factors [BR:
oda03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120869850 (RXRB)
Nuclear receptors [BR:
oda03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
120869850 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
120869850
NCBI-ProteinID:
XP_040105076
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGGQQAP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAAPPSPPGPPLPPSAAATLGGSGAPPP
PSMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSL
SRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQ
KYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgcgcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgcggcggcggcggcggcggcggcggccggaggacagcaagccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcgcgg
agcccagacagttcctccccaaatccccttccccagggggccgctcccccttctcctccc
ggaccacccttgcccccttcagcagctgcgacccttggaggttctggggctccaccccca
ccctcgatgccacccccaccactgggctcccccttcccggttatcagctcttccatgggg
tcccccggcctcccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactacggggtttacagc
tgcgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacctactcttgc
cgggacaacaaggactgcacggtggacaagcgccagcggaaccgctgtcagtactgccgc
taccagaagtgcctggctactggcatgaagagggaggctgtgcaggaggagcgtcagcgg
gggaaggacaaagacggggatggggagggtgccgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcggagcttgctgtggagcagaagagtgaccagggcgtggagggt
cccggggggactgggggcagcggcagcagcccaaatgaccctgtgaccaacatctgccag
gcagctgacaaacagctcttcacacttgttgagtgggcgaagaggatcccccacttttcc
tccttgcccctggatgaccaggtcatattgctacgggcaggctggaacgagctgctcatc
gcctccttctctcaccgatccatcgatgtccgagatggcatcctcctcgccacaggtctc
cacgtgcaccgcaactcggcccattctgcaggcgtgggagccatctttgataggtccctc
tccagggtgctgacagagctagtgtccaaaatgcgggacatgaggatggacaagacagaa
cttggctgcctgcgggcaatcattctgttcaatccagatgccaagggcctctccaacccc
agcgaggtcgaggtcctgcgagagaaagtatatgcgtccctggagacctactgcaaacag
aagtaccctgagcaacagggccggtttgccaagctgctgctgcgtcttcctgctctcagg
tccataggccttaagtgtctagagcatctgtttttcttcaagctcatcggcgacaccccc
atcgacaccttcctcatggagatgcttgaggctccacaccagctggcctga
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