Oryx dammah (scimitar-horned oryx): 120870282
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Entry
120870282 CDS
T07255
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oda03016
]
120870282 (CDKAL1)
Enzymes [BR:
oda01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
120870282 (CDKAL1)
Transfer RNA biogenesis [BR:
oda03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
120870282 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
120870282
NCBI-ProteinID:
XP_040105835
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MPSASCDTFLDDIEDIVSQEDSKPQDRHFSRKHVVPKVRRRNTQKYLQEENSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASEADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGSSLPALLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILHHPRVYAFLHIPVQSASDAVLMEMKREYCVADFKRVVDFLKDKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKELS
RIFHSYSPYDRKIGQRQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPIFMGKMVEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLARGEVSGLTEEFRNRLGNHLNSESHTSAANQRESA
SSRMVLRLQRLHRDFVLKMSVGLAVFAILFALLVKVYN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatacattcctggatgacatagaagatattgtgtcacaagaa
gattcaaagccacaagataggcatttttcgagaaagcacgttgttccaaaggtgcgaagg
cgaaatactcaaaaatatttgcaagaggaaaacagtccaccaagcgatagcactattcca
ggcatacagaaaatttggatacgaacttggggttgttctcataataattcagatggagaa
tacatggctggacaactggctgcttatggatacaaaattacagaaaatgcatcagaggca
gacttatggctcctgaatagttgtactgtaaaaaatccggctgaagaccactttagaaac
tcaattaaaaaagctcaagaggagaacaagaagatagtgcttgctggctgtgttcctcaa
gcccagcctcgtcaggattacctcaaagggctgagcatcatcggggttcaacagatagat
cgtgtagtagaagttgtggaggaaacaattaaaggtcactctgtgagactgttgggtcag
aaaaaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaag
aatccactgatagaaatcatttccatcaatacggggtgtctcaatgcttgtacctactgc
aaaactaaacacgccagaggaaatttggccagttatccaattgatgaattagtagataga
gccaaacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacgggg
gcttacggcagagatattggctccagcctcccggccctgctgtggaagctggttgaagtg
attcctgagggagcgatgctgaggctgggcatgaccaatccaccctatattttagagcac
ctggaggaaatggcaaaaatccttcatcacccccgagtctatgcttttctgcacatacca
gttcagtctgcctctgacgctgtgctcatggaaatgaaaagagaatactgcgtggctgac
ttcaaaagagtggtggattttctgaaagacaaagttcctggaataactattgctacagat
attatctgtggttttcctggagaaacagaccaagattttcaagaaacagtaaaacttgtt
gaagagtacaaatttccaagtctctttattaaccagttttacccaagaccaggaactcct
gctgcaaaaatggaacaagttccagcacaagtgaaaaagcaaagaacaaaagagctttcc
cggatattccattcgtacagcccatatgatcgcaagattggtcagagacaacaagtgtta
gtcaccgaagaatcttttgattccaagttttatgttgcacacaatcgattctacgagcag
gttttagtgccaaagaaccccatattcatggggaaaatggttgaagtggacatttatgaa
tcaggaaaacattttatgaaggggcagccagtttcggacgccaaagtatacacgccatcc
atcagtaaaccattagcaagaggagaagtctcgggtttaacagaggaattcagaaacagg
cttggtaatcacctgaactcagaatcccacacctcagctgcaaatcaacgagagtcggcc
agttcccgaatggtgctacgattgcaaaggctacaccgggactttgtgctgaagatgtct
gtgggcctggctgtgtttgctattctttttgcgcttttggtcaaggtctataattaa
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