KEGG   Oryx dammah (scimitar-horned oryx): 120870489
Entry
120870489         CDS       T07255                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
oda  Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:oda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oda03400]
    120870489 (MDC1)
DNA repair and recombination proteins [BR:oda03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120870489 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 120870489
NCBI-ProteinID: XP_040106080
LinkDB
Position
Unknown
AA seq 1968 aa
MEVSHFPCLHFPFRIMEDTQILNWEVEEEEEVAESPSESLGYSLEPLAQLHIFSSSYGPE
KDFPLYLGKNMIGRMPDCSVALPFSSISKQHAVIEISAWDKAPVLRDCGSLNGTQILRPP
KVLSPGVSHRLRDRELILFADLPCQYHRLDVPRPFVSRGPLTVEETPRVQGGTQPPRLLL
AEDSEEEVDSVLDKCVVKGPRTSSSATVVPESDEEGPSPAPDGPGPPSAFNLNSDTDEEE
SQESGAGEASSAARIGTAAETEQPEPVTAEIQIEKDRCSVKERNRDTEIERDVRNGVVPT
GVILERNQPSGEDSDTDVSDESGPRRRLVGVRPKRAWSCNFIDSDTDGEDEGIPATAAVV
PMKERQIFHEAGTQSPQAPGVARRQESPADGDTDIEEGEAPPDRSQASVVIDSNTDDEEE
VSAALSLARLREGQAGKWNQDADAEEDRAQPVALLEQSRASAGGESDTDVEEEGLPVERR
GVVPKGHMDREYSKKSQHPPRDSDTEGKEDESSPGVHLERSQAFAQVEDEVPLGPAVALP
EKHQVQGIVWPHHTDSEAEGGPAQRPMLRLEEARPPLAGDCELDAENTSGVRRSQLPAEK
DAGTTWATAVPEQDRALAIGTQGGSSTAPGEQDLLPVSRENLADMVVDTGTPGEPQPQQR
EGPQTTTGREREPHGNRATDSEENLHDSEDLNLPATQCFVDRQNQSLEAAPSMEDEPTQA
FLFPLPQEPGPSCCSSQATGSLDESWEVLATQPFCPRESEASETQTVVTLLDTRASCPPP
SRTAQQEQHPESPVHAEPLGMEGRGMQTVEKEMGTPRGTAERGIPEGGPPQEETKKLPSE
GEREDVTGEEELIGGIQGREKNEVLARDTQSQESDKKVNSASTGRGMEIVKVEIETPKET
QEKEREKQTLPGEIFESEAGKLVVERESEAGELEVKGPQELLDRGPQMGETEAGGQDQKG
QASDPPSEPGAGAGDLQGLASDPVASGSQAGGERGAPGTPRRQQRGDLNCEMPPAEKASR
GDQESPDACLPPAAPEASAALPNSLISQIQKHPAPQSLIFPAPAPLELPIPRTRQNETQE
APETPFSSELNSVHPEPKVRPQGSSPVSSLPLEPHPTTPTGQPIALEPISGVSRSRTHSS
FDVTASSVVPTALALQPSTSTDQPVTPKPTLRAPRGRAQRSSVKTPEPNVPTDQPVAPEL
TAMATRGRAQRSSVKTSKPDNPTTPKPQPSTSTDQLVTPKPTSRAPRGRTPRSSAKTPEP
AVPTASELQPAAPKDQPVAPELTSRATRGRTQRSSFKTSKPDMSTTPEPQPSTSTDQPVI
PKPTSRAPRGRTPRSSAKTPEPVVSTASELQPSALTDQPVTPELTSRATRGRAQRSSVKT
PDPVTTTTPELQPSTSTDQLVTPKRTSRAPRGRTRRSSAKTPEPVVPTASELQPSAPADQ
PVGPWATQCRRHRSSVKTPEPVVPTVPEPQPSTSKDQSVAPEPTSQATESQTHRSSVKTS
QPAESTAPDLKPSSPTDQPVTPKVIVQGGPSRTGRASTANAVLVPTTPEFQSPVPSEQPL
PPDPIPEVNCSRRLRAARKRGSPTVHVHEPCTIPPEPNSRSSRNQRHGAVKAAKPLSTIP
EPAFAQLPEAPLHTPQMPKEEAADGSGFTPEPQPRASQNHKRPSATAHSPPLQKRLQRGR
VPQKAASLKEEENPVARPRKEEGVVIPGPGKRKREQTEEESQGRPSRSLRRTKPIQESTA
PKVLFTGVVDARGERTVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLAW
LHESRKAGCFLPPDEYLVTDPEQEKNFGFSLREALSRAQERRLLEVRLSADPWFSHFPAV
HSLSEHLLSPLFPPSQGYEIHVTPGVQPPPPQMGEIINCCGGAILPSMPRSYKPQRFVIT
CSQDFPRCAVPYRVGLPILSPEFLLTGVLKQEVKPEAFAFSTVEMSST
NT seq 5907 nt   +upstreamnt  +downstreamnt
atggaggtgtcccactttccttgtctacattttccctttaggatcatggaagacacccag
attttaaactgggaagttgaagaagaggaggaggttgcagagagccccagtgaatctctg
gggtatagcttggagcccctagcgcagctgcatatcttcagtagttcctatggaccagaa
aaagacttcccactctacctcgggaagaacatgataggccgaatgcctgattgctctgtg
gccctgcccttttcatcaatctccaaacaacatgcagtgattgaaatctctgcctgggac
aaggcgcctgtcctccgggattgcgggagcctcaatggcactcaaatcctgcggcctcct
aaggtcctgagccctggggtgagtcatcgtttgcgggaccgggagttgattctctttgct
gacttgccctgccagtaccatcgcttggatgtcccccggccttttgtctcccggggccct
ctaactgtagaggagacacccagggtacagggaggaactcaaccccccaggcttctgttg
gctgaggactcagaggaagaagtagattccgttttggacaagtgtgtggtgaaaggacca
aggacctcctcttcggcaacagtcgttccagagagtgatgaagaagggccttcccctgcc
ccagatgggcccgggccaccttctgccttcaacttgaacagcgacacggatgaggaagaa
agtcaggaatcaggagcaggggaggcctcttcagctgccagaataggtaccgctgcagag
acggaacagcctgaacctgtcacagccgaaatccagattgagaaggatcggtgttccgtg
aaggagaggaacagggacacagaaatcgagagggatgtgaggaatggggtggttccgact
ggagtgattctggagaggaaccagccttctggggaggacagtgacacagatgtgagtgat
gagagtgggcctcgaagaaggcttgttggggtccgtccgaaaagggcctggtcttgtaac
ttcatagacagtgataccgatggagaggatgaggggattcctgctactgcagcagtggtt
cccatgaaggagaggcagatcttccacgaagctggtacacagagcccccaggcacctggt
gtggcacgtcggcaggagagcccagctgacggtgatacagatatagaggagggggaggcc
cccccggacagaagccaagcctccgtggtgattgacagcaatacagatgatgaggaagaa
gtctcagcagcactgtcactggcacgtctaagagagggccaggctggtaagtggaaccaa
gatgcagatgcagaagaggacagggcccaacccgtggcccttctggagcaaagccgggcc
tctgctgggggagagagtgacacagatgtggaggaagaggggctcccagtagaaaggagg
ggagtggttcccaagggtcacatggacagggaatattcaaaaaagagccagcatcctccc
agggacagtgatacagaggggaaggaagatgagagctcaccaggggtccacctggagaga
agccaggcctttgcacaagtggaggatgaggtcccactggggccagctgttgcacttccg
gagaagcatcaggtacaaggcatagtgtggccacatcacaccgattcagaggcagaaggg
ggcccggcacagcgccccatgctgcgtctagaggaagcccggcctcctttagctggggac
tgtgaactggatgcggaaaacacatctggtgttagaaggagccagcttccggcagaaaaa
gatgctgggaccacgtgggccacagccgttcctgaacaggacagagcacttgccattggg
acccagggtgggtcatccacggcaccaggggagcaagaccttctcccggtctcaagggaa
aacctagcagatatggtggtggacacaggcactccaggggagccccaaccgcagcagaga
gaggggccccagaccaccacaggaagggagagagaaccacatgggaatagggccacagac
tctgaagagaacctccatgattctgaagatctgaacctaccagctacccagtgctttgta
gacagacagaatcagagcctggaagcagcccccagcatggaggatgagcccacccaggcc
ttcctgtttcctctgccccaagagcctggcccttcctgttgcagctcccaggccacaggt
tccctggatgagtcatgggaggtcttggcgacacagccattctgtccaagagagtctgag
gcctctgagacccaaaccgttgtcaccctccttgacacccgtgcatcttgcccccctcca
tctaggacagcacagcaagagcaacatccagagagcccagtccatgcagagcccctgggg
atggaaggcagagggatgcagactgtggagaaagaaatgggtaccccaagaggaacagca
gagagggggatccctgagggagggccaccgcaggaggaaaccaagaaactgccctcggaa
ggagagagggaagatgtgacgggagaggaagaattaatcggggggatacagggcagagaa
aaaaatgaggtgttagctagagatactcagagccaagaatctgacaaaaaagtgaatagt
gcaagtaccggaaggggaatggagattgtaaaggtagaaattgagacacccaaggaaaca
caagagaaagagagggaaaagcagactctcccaggggaaatatttgagagtgaagcaggg
aaactggtagtagagagggagagtgaggcaggtgagttagaagtcaagggaccccaagag
ctactggacagaggcccacagatgggggagacagaggcggggggccaggaccagaaaggc
caagcctctgatccgccatcagagcctggagcaggggcaggagaccttcagggacttgct
tcagacccagtagcttctgggagtcaggcaggtggagaaaggggagccccagggaccccc
aggaggcagcagagaggtgacttgaattgcgagatgccacctgctgagaaggcttccagg
ggtgatcaggaatccccagatgcttgtctgcctcctgcagcgcctgaagcctcagccgca
ctcccaaattccctcatctctcagatccaaaaacatcccgcacctcagtccctcattttt
cccgctccagctcctttagaactgcctattcccaggaccagacaaaatgagactcaggaa
gctccagagactcccttctcctcagagctgaactctgtccacccagaacccaaagtcagg
ccccaggggtcctctccagtttcttctctaccccttgagccccaccctaccacccccaca
ggccagcctattgcccttgaacccatatctggggtctctcggagcaggacacatagttcc
tttgatgtaactgcctcatcagttgtccccacagcccttgcactgcagccatccacctcc
acagaccagcctgtcacccctaagcccacacttcgggcccctcggggcagggcacagagg
tcttctgtcaaaacccctgaacccaatgtccccacagaccagcctgttgcccctgagctc
acagctatggccactcggggcagggcacagaggtcttctgtcaagacttccaaaccagat
aaccccacaacacccaagccccagccttccacctccacagaccagcttgtcacacccaaa
cccacatctcgggcccctcggggtaggacacctaggtcttctgccaagactcctgaacca
gctgtccccacagcctctgagctccagcctgctgcccctaaagaccagcctgttgctcct
gagctcacctctagagccactcggggcaggacacagaggtcttctttcaagacttccaaa
ccagatatgtccacaacccccgagccccagccttccacttccacagaccagcctgtcatc
cccaaacccacatctcgggcccctcggggcaggacacctaggtcttccgccaagactcct
gaaccagttgtctccacagcctctgagctccagccttctgccctcacagatcagcctgtc
actcctgagctcacatctagggctactcggggccgtgcacagaggtcctctgtcaaaacc
cctgatccagttaccaccacaacacctgagctccagccttccacctccacagaccagctt
gtcacccccaaacgcacatctcgggcccctcgaggcaggacacgtaggtcatctgccaag
actcctgaaccagttgttcccacagcctctgagctccagccttctgcccctgcagaccag
cctgttggtccttgggccactcagtgtagaagacataggtcttctgtcaagaccccagaa
ccagttgtccccacagtccctgaacctcagccttccacttctaaagaccagtctgtcgct
cctgagcccacatctcaggccactgagagccaaacgcataggtcctctgtcaagacatcc
cagccagctgaatccacagcccctgacctcaaaccttcctcccccacagaccagcctgtc
actcccaaggtcatagttcagggtggtccaagcaggacaggaagggcttctacagcaaat
gctgtgctggttcctactacccctgaattccagtctccagtcccgtcagaacagcctctt
ccccctgaccccatccccgaagtcaactgcagcaggaggctgagggccgctaggaaacgt
gggtctcccacagttcatgttcatgagccctgcaccataccccctgaacctaactcccgc
tcttcaaggaaccaaagacatggggcagtgaaagcagccaaaccccttagcaccattcct
gagcctgcctttgcccagctccccgaggcaccgcttcacactccccagatgccaaaggag
gaggcagcagatggatcaggcttcaccccagagccccagcctagggcctctcaaaaccac
aagaggccttcagctactgcacattcacctccacttcaaaaacggctccagagagggaga
gtccctcagaaggcagcatcccttaaggaagaagaaaatccagtagcgaggccgaggaag
gaagagggtgtagtgattccaggtccaggcaagagaaagagagagcagacagaggaggag
tcccagggaagaccgagccgcagcctgcgacggaccaaaccgatccaggagtccacggcc
cccaaagtgctgttcaccggtgtggtggatgctcgtggagagaggacagtgctggccctg
gggggcagtttggccagctcggtggctgaggcttctcacttggtgactgatcggatccgc
cggacggtcaagtttctgtgtgccctgggccggggcatccccatcctctccctggcctgg
ctgcatgagtcccgcaaggcaggctgtttcttgcccccggacgaatacttggtgactgat
cctgagcaggagaagaacttcggcttcagccttcgggaggccctgagccgagctcaggag
cgaaggctgctggaggtgaggctgtctgctgacccctggttcagccatttcccagccgtc
cacagcctctcagagcatctactgtctccactgtttcctccctcccagggctatgagatt
cacgtgacccccggagtccagccaccgccacctcagatgggagaaatcatcaactgctgt
ggaggcgccatcctgcccagcatgccccggtcctacaagcctcagaggttcgtgatcaca
tgttcccaggactttcctcgatgtgctgttccatatcgggttgggctgcctatcctctca
cccgaattcctgctgacaggagtactaaagcaggaagtcaagccagaggcctttgccttc
tccactgtggaaatgtcatccacctga

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