Oryx dammah (scimitar-horned oryx): 120870562
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Entry
120870562 CDS
T07255
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120870562 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oda01007
]
120870562 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oda03016
]
120870562 (VARS1)
Enzymes [BR:
oda01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
120870562 (VARS1)
Amino acid related enzymes [BR:
oda01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120870562 (VARS1)
Transfer RNA biogenesis [BR:
oda03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120870562 (VARS1)
Prokaryotic type
120870562 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Jag_N
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
120870562
NCBI-ProteinID:
XP_040106245
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRVSLQPPPASRTPFPPPRLPAL
EQGPGGLWVWGATAVSQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRSSAQDPQAALAALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPAA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARSLSQQPGSEVPAPPKTAAQLKKEAKK
REKLEKFQQKQKVQQQQPPPGEQKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDS
YSPQYVEAAWYPWWEQQGFFRPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKW
KEEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSNDEVVVATTRIE
TMLGDVAVAVHPKDPRYQHLKGKSVIHPFVSRSLPIVFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAVSIMDARGALINVPPPFLGLPRFEARKAVLAALKEQGLFRGIEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFITVNDSAVPPGEDPDGRYWVSGRTEAEAREKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEV
EKAKEGQKADFPTGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSPTSEVRAWWVVRWAAPTWVTPLPSPHQARPLPLRSLHVAGSTGHRGSL
RHCGPPAQWRGRPFLAWATTLGTWWLLWTHLLESRLPVVPTPMGLWPLLLGTWCPLADRL
LPPHKPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLECL
KPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTLQAPPSLCVTA
YPEPSECSWKDPEAEAAFELALSITRAVRSLRADYNLTRIRPDCFLEVADEATGALASAV
SGYVQTLASAGIVAVLALGASAPQGCAVALASDRCSVHLQLQGLVDPARELGKLQAKRDE
AQRQAQRLRERRAASGYTVKVPLKVQEADEAKLQQTEAELRKVDEAIALFQKML
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgtacgtctctcctcaccccgatgccttccccagcctccgagccctcata
gctgctcgctacggggaagctggggagggtccgggatggggaggagcccacccccgcgtc
agtctccagccgccccccgccagccggaccccttttcctccaccccgtctgccagccctg
gaacagggtcctggtgggctctgggtgtggggggccacggctgtgtcccagctgctgtgg
ccagcaggcctggggggtcccgggggtagtcgggcagccgtcctggtccaacagtgggtc
agttacgctgacaccgagctaataccagctgcctgtggggctacgctgccggccttggga
ctccgaagctcggcccaagacccccaggctgcactggcggccctgggcagagccctgagc
cccttggaagagtggcttcgactgcacacctacctggccggggaggccccgactctggct
gatctggcagctgtcacagccttgctgctgcctttccgttatgtcctggaccccgctgcc
cgccggatctggggtaatgtgactcgctggtttatcacatgtgttcagcagccagaattc
cgggccgtactgggagaggtggttctgtattcaggggccaggtctctctcccaacagcca
ggctctgaggtccctgcacccccaaagacggctgctcaactcaagaaagaggcaaagaaa
cgggagaaactagagaaattccagcagaagcagaaggtccaacagcagcagccaccccct
ggggagcagaagaaaccaaaaccagagaagagggagaaacgagatcctggggtcattacc
tacgatctcccgaccccacctggggaaaagaaagatgtcagtggcaccatgcctgactcc
tacagccctcagtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttc
aggcctgagtatgggcgttccagcgtgtcagcaccaaacccccggggcatcttcatgatg
tgcatcccaccccccaacgtgacaggctccctgcacctgggccacgcgctcaccaacgca
atccaggactccctgacccgctggcaccgcatgcgtggagagaccaccctgtggaatcct
ggctgtgaccacgcgggcattgccacccaggtggtggtggagaagaaactctggcgcgag
caagggctgagtcggcaccagctggggcgagaggctttcctgcaggaggtctggaagtgg
aaggaggagaaaggtgaccgaatttaccaccagctgaagaagcttggcagctccttggac
tggaatcgagcctgtttcaccatggatcctaaactgtcagcagccgtgacagaggctttt
gtacggctccacgaggagggagtcatttaccgcagcacccgccttgtcaactggtcctgc
accctcaactctgccatctccgacatcgaggtggataagaaggagctaacaggtcgtacc
ctgctctctgtgcctggctacaaagagaaggtggagtttggggtcctcgtctcctttgct
tacaaggtccaaggctcagacagcaacgacgaggtggtagtggcaaccactcggatcgag
acgatgctgggagatgtggctgtagctgtgcaccccaaagaccccagataccagcacctg
aagggcaagagcgtgatccacccatttgtgtctcggagcctccccatcgtctttgatgac
tttgtggacatggagttcggcacaggcgcggtgaagatcacccccgcccacgaccagaat
gactatgaggttgggcagcggcacgggctggaggctgtcagcatcatggacgcccgcggg
gccctcatcaacgtgcccccacctttcctgggcctgcccaggtttgaggccaggaaggca
gtgctggcagcgctcaaggagcaggggctgttccgcggcattgaggacaaccccatggtg
gtgccactttgcaaccgctccaaggacgtggtggagcctctgctgcggccgcagtggtac
gtgcgctgtggggagatggctcaggctgccagcgctgccgtgacacggggtgacctccgg
atcctgccagaggcccatcagcggacgtggcatgcctggatggacaacatccgggactgg
tgtatctcccggcagctgtggtggggccatcgcatcccagcctacttcatcactgtcaac
gactctgctgtgcccccaggggaggaccctgatgggcggtactgggtgagcgggcgcact
gaggccgaggcccgggagaaggcagccaaggagttcggcgtgtcccctgacaagatcagt
ctccagcaagatgaagatgtactggacacctggttctcttctggcctcttccccttctcc
atcctaggctggcccaaccagtcagaagatctgagtgtgttctacccggggacgctgctg
gagacaggccatgacatcctcttcttctgggtggccaggatggtcatgctcggcctcaag
ctcactggcaagctgcccttcaaagaggtctacctccatgccatcgtgcgggacgcccat
ggccggaagatgagcaagtctctaggcaacgtcattgaccccctggacgttatccatggg
gtctccctgcagggcctccacgaccagttactgaacagcaacctggatcccagcgaggtg
gagaaggcaaaagaggggcagaaggcagatttcccgacggggatccccgagtgtggcacc
gatgcgctccggtttggactatgtgcctacacgtcccagggccgtgacatcaacctggat
gtgaaccggatattggggtaccgccatttctgcaacaagctctggaacgccaccaagttt
gctctccgtggccttgggaagggttttgtgccctcacccacgtccgaggtgagagcctgg
tgggtggtgaggtgggcagcacccacgtgggtcacacccttgccatccccacatcaagcc
cggcccctgcccctaaggagcctgcatgtagctgggagcacaggacacaggggaagcctc
aggcactgtggtcctcccgcccagtggcggggccggccctttctggcctgggccaccacc
ctgggcacgtggtggttgctttggacccatctcctggaaagcagactccctgtagttccc
actcccatggggttgtggcccctcctcctgggcacatggtgccccctggctgacaggctt
cttcccccccacaagcctggaggccacgagagcctggtggaccgctggatccgcagccgg
ctgaccgaagctgtgaggctcagcaaccaaggtttccaggcctacgacttcccggctgtc
accaccgcccagtacagcttctggctctacgaactctgcgatgtctacctggagtgcctg
aagcctgtgctgaatggggtagaccaagtggcagctgaatgcgcccgccagaccctctat
acctgcctggacgtgggcctgcggctactctcacccttcatgcccttcgtgactgaggag
ctgttccagcggctgccccggcggacactgcaagctccccctagcctatgcgtcaccgcc
tacccagagccctcggagtgctcctggaaggaccctgaggcagaagctgccttcgagctg
gccctgagcatcactcgagccgtgcgctccctgcgtgctgactacaacctcacccggatc
aggcccgactgtttcctggaagtggctgacgaggccacaggtgccctggcatcggcggtg
tcaggctacgtgcagacgctggccagcgcggggatcgtggccgtcctggcgctgggggct
tctgcaccccagggctgcgctgtggccctggcctctgaccgctgctccgtccacctgcag
ctgcaggggctagtagacccagcccgggagctgggcaaactgcaggccaagcgtgacgag
gcgcagcggcaggcccagcgtctgcgggagcgccgcgccgcctcaggctacactgtcaag
gtgcccctcaaagttcaggaggcagatgaagccaagctccagcagacagaagcagagctc
aggaaggttgatgaggccattgccctatttcagaagatgctgtga
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