Oryx dammah (scimitar-horned oryx): 120870895
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Entry
120870895 CDS
T07255
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120870895 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120870895 (SMARCA5)
03036 Chromosome and associated proteins [BR:
oda03036
]
120870895 (SMARCA5)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
120870895 (SMARCA5)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120870895 (SMARCA5)
RSF complex
120870895 (SMARCA5)
WICH complex
120870895 (SMARCA5)
B-WICH complex
120870895 (SMARCA5)
NORC complex
120870895 (SMARCA5)
BRF complex
120870895 (SMARCA5)
NuRF complex (fruit fly)
120870895 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
120870895
NCBI-ProteinID:
XP_040106382
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MSSAADPPPPPPPESAPSKPAASAAGSGSNSSNKGGPEGVAAQAAPSVASAGPADSEMEE
VFDNASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFEILEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgaccctccgccacccccgcctcccgagagcgcgccttccaagccc
gcagcctcggccgccggcagcgggagcaacagcagcaacaaaggcggccccgagggcgtc
gcagcccaggcggctccctccgtggccagtgccggccccgcggactcggagatggaggaa
gtatttgacaatgcatctcctggaaagcaaaaagaaatccaagaaccagatcccacctat
gaagaaaaaatgcaaactgaccgggcaaatagatttgagtatttattaaagcagacagaa
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccggggcgcccacgaataaaaaaggatgagaaacagaacttgctatcagttggcgac
tatcgacaccgaagaacagagcaagaagaagatgaagaattattaacagaaagctccaaa
gcaaccaatgtttgcactcggtttgaagactctccatcatatgtcaaatggggtaaactg
agagattatcaagtccgaggattaaattggctcatttctttgtatgagaatggcatcaat
ggtatccttgcagatgaaatgggcttgggaaagacgcttcaaacaatttctcttcttggg
tacatgaaacactatcgaaacattcctggtcctcacatggttttggtgcctaagtctacg
ttacacaactggatgagtgaattcaagagatgggtaccaacacttaggtctgtttgttta
ataggagataaagaacagagggctgcttttgtcagagatgttttgttaccaggagaatgg
gatgtatgtgtaacttcttatgaaatgcttattaaagagaagtctgttttcaaaaaattt
aattggaggtacttagttattgatgaagctcacaggatcaaaaatgaaaaatccaagttg
tcagaaatagtgagggaattcaagactacaaatcggctattattaactggaacacctctt
caaaacaacttgcatgaactttggtcacttcttaattttttgttaccagatgtctttaat
tcagctgatgactttgattcctggtttgatacaaataattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaggctgatgtt
gaaaagagtttacctccaaagaaggaagtaaaaatctatgtgggtcttagcaaaatgcaa
agggaatggtatactcggatattaatgaaggatatagatatactgaactctgcagggaag
atggacaaaatgcggctgctgaatattctgatgcagttgaggaaatgctgtaaccacccc
tatctctttgatggggctgaaccgggtccaccttacacaacggacatgcatctggttacc
aacagtggcaaaatggtggtgttagacaaactgctccctaaattaaaagaacaaggttcc
cgagtactgatcttcagtcagatgaccagggtattggatattttggaagattattgcatg
tggaggaattatgagtactgtaggttggatggacagacaccccatgatgagagacaagag
tccatcaatgcgtacaatgaaccaaacagcacaaagtttgtttttatgttaagcacacga
gctggtggtcttggcatcaatcttgctactgctgatgttgtgattttgtatgactcagat
tggaatccccaagtagatcttcaggctatggaccgagcacatagaattggacagaccaag
acagtcagagtgttccgcttcataaccgataacactgtagaagaaagaatagtggagcgt
gctgagatgaaactcagattggattccatcgtcatccagcagggaagacttgtggatcag
aatctaaacaaaattgggaaagatgaaatgcttcaaatgataaggcatggggcaacacat
gtatttgcttcaaaggagagtgagattactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaattttacaatggatacagagtcgagcgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgagcctcctaaacgagaaagaaaagcc
aactatgctgtcgatgcctatttcagggaagctcttcgcgtcagtgaacctaaagcaccc
aaggctcctcgacctccaaaacaacccaatgttcaggatttccagttctttcctccacgt
ctatttgaaatattggaaaaagaaattctatattacagaaaaacaattggttataaggtc
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaggaagaacagcttaaaatt
gatgaagctgaaccccttaatgatgaagagttagaggaaaaagagaagcttctgacgcag
ggatttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtc
attgaatactcagctgtattctgggaaagatgcaatgagctgcaggacatagaaaagatt
atggctcagattgaaagaggagaggcaagaattcagagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcttatggt
actaacaaagggaaaaactacactgaagaggaagaccgcttcctgatctgtatgcttcac
aagcttggattcgacaaagaaaatgtgtatgatgagctgcggcagtgtattcgcaactct
cctcagttcagattcgactggtttctaaagtccagaaccgcaatggaactccagaggagg
tgtaacaccttaatcaccttgattgaaagagaaaatatggaactagaagaaaaggagaag
gcagagaagaagaaaagaggacccaaaccttcaacacagaaacgtaaaatggatggagca
cctgatggccgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
