Oryx dammah (scimitar-horned oryx): 120871119
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Entry
120871119 CDS
T07255
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oda03009
]
120871119 (DDX54)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120871119 (DDX54)
Ribosome biogenesis [BR:
oda03009
]
Eukaryotic type
Pre-60S particles
Helicases
120871119 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
120871119
NCBI-ProteinID:
XP_040106732
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MAAGTRPAAAPRSRATMAQWKKKKGLRRRRGAASQSRSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPMILDGKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLSELLAT
QGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPPEEPSGMEGGDGVL
GRVPQGVVDDEDCGLRTSLEASLELQGLSRVADNAQQQYVRSRPAPSPESIKRAKELDLA
GLGLHPLFSSRFQQEELQRLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKREKDRKA
IASFQQGRQERQEGLAGPAPSLPAPQEEQPEKDEVAAESVEDIFTEVVGRKRQQPGPHQG
AKRRREEARQRDQAFYIPYRPKDFDSERGLSVGGDGGAFEQQVAGAVLDLMGDEAQSLTR
GRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKGDLYQKWKQKQKIDDRDSEEE
GTFDRRGPERRGGKRGRGQGASQPRTPGTPAGRVRSELKTKQQILKQRRRAQKMRFLQRG
GLKQLSARNRRRAQELQQGAFGRGAPSKKGKMRKRM
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcactcgcccggcggccgcaccgcggtccagagctaccatggcccagtgg
aagaagaagaagggcctccggaggcgccggggtgcggcgtcccagtcccgcagcagcgac
tcggaggacggcgagtttgagatccaggcagaagatgacgcccgggcccagaagctggga
cctggtagacccctacccactttccctacctcggaatgcacctcggacgtggagccagac
acacgggagatggtgcgagctcagaacaagaagaagaagaaatcaggaggtttccagtcc
atgggcctgagctacccagtcttcaaaggcatcatgaagaagggctacaaggtgccgaca
cccatccagaggaagaccatcccaatgatcctggacggcaaggatgtggtggccatggcc
cggacgggcagcggcaagaccgcctgcttcctcatccccatgttcgagcggctcaagacc
cacagtgcccagaccggggcccgcgccctcatcctctcgcctacccgagagctggccctg
cagaccatgaagttcaccaaggagcttggcaagttcactggcctcaagactgccctgatc
ctgggtggggacaagatggaagaccaatttgcagccttgcacgaaaatcccgacataatc
attgccacccctgggcggttggtgcatgttgctgtggagatgaacctgaagctgcagagt
gtggagtacgtggtattcgatgaggccgacaggctctttgaaatgggcttcgcagagcag
ctccaggaaatcattggccgcctccctgggggccaccagactgtcctgttctctgccaca
ctgcccaagctgctggtggagttcgcgcgagctggcctgacggagcccgtgctcatccgg
ttagatgtggactctaaactcaacgagcagctcaagacctccttcttcctggtgcgggag
gatgccaaggccgcggtgctgctccacctgctgcgcaacgtggtgcggccccaggaccag
acggtcgtgtttgtggccaccaagcatcacgcggagtatctcagcgagctgctggcgacc
caaggggtgagctgtgcccacatctacagcgccctggaccagacggcccgcaagattaat
ctggccaggttcacgcacggcaagtgctccgccctcatcgtgactgacctggccgcccgg
ggcctggacatcccactgctggacaatgtcatcaactacagcttccccgccaagggcaag
cttttcctgcaccgcgtgggtcgcgtggcccgggccggccgaagtggcacagcctattcc
ttggtggcccctgatgaggtcccctacctgctggacctacacctgttcctgggccgtgct
ctgacccttgcccgtccacccgaggagccctcaggcatggaaggcggggacggcgtactg
ggccgggtgccacagggcgtggtggacgatgaggattgcggcctgcggaccagcctggag
gcgtcgctggagctgcagggcctgagccgcgtagctgacaatgcccagcagcagtatgta
cgctcacggccggcaccctcgcccgagtccatcaagagggccaaggagctggacctcgcc
gggctgggcttgcaccccctcttcagctctcgcttccagcaggaggagctgcagcggctc
aggctggtggacagcatcaggaactaccgctcccgggcgaccatctttgagatcaacgcc
tccagtcgcgacctgagcagccaggtgatgcgcgccaagcgggagaaggaccgcaaagcc
atcgccagcttccagcagggacggcaggagcggcaggagggcctggcgggcccagccccg
agcctcccagcaccgcaggaggagcagcctgagaaggacgaggtggcggcagagagtgta
gaggacatcttcacggaagttgttggccggaagcggcagcagccaggaccccaccaggga
gccaagaggcggagggaggaggcccggcagcgggaccaggcattctacatcccctaccgg
cccaaggactttgacagcgagcggggcctgagcgtcggcggggacgggggggccttcgag
cagcaggtggctggtgcagtgctggacctgatgggagatgaagcccagagcctgaccagg
ggccggcagcagctcaagtgggaccggaagaagaagcggtttgtgggacagtcaggacaa
gaggacaagaaaaagatcaagaccgagagtggccgctacatcagcagctcctacaagggg
gacctctaccaaaagtggaaacagaaacagaaaatcgatgatcgtgactcagaagaagaa
ggaacttttgaccgccgtggcccagagcgaagaggtgggaagcgcggccgagggcaaggt
gcatcccagccccgcacccctggcacccccgcgggccgcgtgcgctcagagctcaagacc
aagcagcagatcctgaagcagcggcgccgagcccagaagatgcgcttcctgcagcgtggg
ggcctgaagcagctctctgcccgcaaccggcgccgcgcccaggagctgcagcagggcgcc
tttggccggggtgccccttccaagaagggcaagatgaggaagaggatgtaa
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