Oryx dammah (scimitar-horned oryx): 120871592
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Entry
120871592 CDS
T07255
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04390
Hippo signaling pathway
oda04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
120871592 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
120871592 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120871592 (SOX2)
Transcription factors [BR:
oda03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120871592 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120871592
NCBI-ProteinID:
XP_040107575
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagc
ccggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgc
aagatggcccaagagaatcctaagatgcacaactcggagatcagcaagcgcttgggcgcc
gagtggaaacttttgtctgagacggagaagcggccgttcatcgacgaggccaagcggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacactgccgggagggctgctcgccccgggcggcaac
agcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgcatg
gacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctacccgcagcacccgggcctcaacgcgcacggcgccgctcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtacaactctatgaccagctcgcagacctacatg
aacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcgctt
ggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacctct
tcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgcccccagcagactacacatgtcccagcac
taccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcacatg
tga
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