Oryx dammah (scimitar-horned oryx): 120871943
Help
Entry
120871943 CDS
T07255
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03030
DNA replication
oda03410
Base excision repair
oda03420
Nucleotide excision repair
oda03430
Mismatch repair
oda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120871943 (POLD1)
03410 Base excision repair
120871943 (POLD1)
03420 Nucleotide excision repair
120871943 (POLD1)
03430 Mismatch repair
120871943 (POLD1)
03440 Homologous recombination
120871943 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oda03032
]
120871943 (POLD1)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120871943 (POLD1)
Enzymes [BR:
oda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120871943 (POLD1)
DNA replication proteins [BR:
oda03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
120871943 (POLD1)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
120871943 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
120871943 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
120871943
NCBI-ProteinID:
XP_040107907
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MHTRMDGKRRPGPGPGVPPKRARGGLWDEDEGYRPSQFEEELALMEEMEAERRLQEQEEE
ELQSALEGVDGQFSPMATDARWLRPTPPALDPQTEPLIFQQLEIDHYVGPARPLPGAPPP
SQGSVPILRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRDQR
GGKELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLG
TPSFAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYILRPEGKATLCQLEADVLWSDVIS
HPPEGEWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTL
RPCAPILGAKVQSYEREEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPG
FPLLGRVIGLRSNIRDSSFQSRQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAV
SFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMAR
VTGVPLGYLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVP
IATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLP
QILENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEIS
QSVTGFGRQMIEKTKQLVETKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGRE
AADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNC
PLVANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGK
QAHVELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYY
LEQQLAKPLLRIFEPILGEGRAEAVLLRTGVGWGTPGGWGDGGQGRAPSPPPALTCRWGP
HSLQDGAHGQGGRPPGLRQTPELLHWLPHCPQPPGSRVQVLPAPGVRAIPEGGVPPERPG
GALLTSVDTVPALPGQPARGCHLHQPGLSHLLHAQEGAEGSGGPGAAAAALRAPRPRGLV
TSDLGGLPTLGGWGGQAGN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaaggatggatggtaagcggcgaccaggcccggggcctggggtgcccccaaag
cgggcccgtgggggcctctgggatgaagatgaggggtaccggccctcgcagttcgaggag
gagctggcgctgatggaggagatggaagcagagcgcaggctgcaggagcaggaggaggag
gagctgcagtcggccctggagggggtggacgggcaattctccccaatggccacagatgcc
cgctggcttcggcccaccccacccgccttggacccccagacggagcccctcatcttccag
cagttggagatcgaccattatgtgggcccagcgcggcccctgcctggggcacccccgcca
tcccagggctcggttcccatcctccgtgcctttggggtcaccgacgagggggtctccgtt
tgctgccacatccatggctttgcaccctacttctacaccccagcgccccccggtttcgga
cctgagcacctcagtgagctgcagcgggaactgagtgcagccattagccgggaccagcgc
gggggcaaggagctcactgggccggccgttctggcggtggagctgtgctcccgggagagc
atgttcgggtaccatgggcatggcccctccccgtttcttcgtatcaccctggcactgccc
cgcctcatggcacccgcccgccgcctcctggagcaggggatccgcctggccggcctgggc
acccccagctttgcgccctacgaggccaatgttgactttgagatccggttcatggtggac
acagacatcgtgggctgcaactggctggagctaccagccgggaaatacatcctgaggcca
gaggggaaggccacgctgtgtcagctggaggccgacgtgctctggtcagacgtgatcagc
cacccgccggaaggagagtggcagcgaatcgcccctctgcgcgtgctcagcttcgacatc
gagtgcgctggccgcaaaggcatcttcccggagcccgagcgggacccagtgatccagatc
tgctcactgggcctgcgctggggcgagccggagcccttcctgcgcctggcgctcaccctg
cggccctgcgcccccatcctgggcgccaaggtgcagagctacgagcgggaggaggacctg
ctccaggcctggtcgaccttcatccgcatcatggatcccgacgtgattaccggctacaat
atccagaactttgaccttccctacctcatctcccgggcccagaccctcaaggtgccaggc
ttccccttgctgggccgtgtgatcggcctccgctccaacatccgggactcgtccttccag
tccaggcagaccggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatg
gacatgctgcaggtgcttctgcgggagtacaagctccggtcctacacgctcaatgccgtg
agcttccacttcctgggcgagcagaaggaggacgtgcagcacagcatcatcacagacctg
cagaacgggaacgaccagacgcgccgccgcctggccgtgtactgcctcaaggacgccttc
ctgcccctgcggctgctggagcggctcatggtgctggtgaatgccatggagatggcgcgc
gtcaccggcgtgcccctcggctacctgctcagccgcggccagcaggtcaaggtcgtgtcc
cagctactgcgacaggccatgcgccaggggctgttgatgcccgtggtgaagacggagggc
ggtgaggactatactggggccacggtcatcgagccgctgaaagggtactatgacgtcccc
atcgccaccctggacttctcctcgctgtacccgtccatcatgatggcccacaacctgtgc
tacaccacgctcctgcggcctggggccgcccagaaactaggcctgaccgaggatcagttc
atcaagacacccacgggggatgagtttgtgaagacatcagtgcggaaggggctgctcccc
cagatcctggaaaacctgctcagtgcccggaagagggccaaggccgagctggccaaggag
acagaccccctacggcggcaagtgttggacgggcgccagctggcgctgaaagtgagtgct
aactctgtgtacggcttcaccggtgcccaggtgggtaggctgccgtgcctggaaatctca
cagagtgtcaccgggttcgggcgccaaatgattgagaagacaaagcagctcgtggagacc
aagtacacggtggagaacggctacagcaccagcgccaaggtggtgtatggtgacacagac
tcagtcatgtgccgcttcggtgtctcctccgtggctgaggcgatggctttgggacgggag
gctgcagactgggtgtccggccacttcccctcgcccatccggctagagtttgagaaagtc
tacttcccctacctactcatcagcaagaagcggtacgcgggcctgctcttctcctcccgg
cccgacgcccacgaccgcatggactgcaagggcctggaggccgtgcgcagggacaactgc
cccctggtggccaacctcgtcaccgcctcgctgcgccgcctgctcatcgaccgagacccc
gcgggcgctgtggcgcatgcacaggacgtcatctccgacctgctgtgtaatcgcattgac
atctcgcagctggtcatcaccaaggagctgacccgcgccgccgccgactacgcgggcaag
caggcccacgtggagctggccgagaggatgaggaagcgggaccccgggagcgcgcccagc
ctgggcgaccgcgtcccctacgtgatcatcagcgctgccaagggcgtggccgcctacatg
aagtccgaggaccccctgttcgtactggagcacagcctgcccatcgacacgcagtactac
ctggagcagcagctcgccaagccgctcctgcgcatctttgagcccatcctgggcgagggc
cgtgcggaggctgtgctactgcgtacgggggtggggtgggggaccccgggtgggtggggg
gacgggggtcagggtcgggcacccagcccaccgcctgccctcacctgcaggtggggacca
cactcgctgcaagacggtgctcacgggcaaggtgggcggcctcctggccttcgccaaacg
ccggagctgctgcattggctgccgcactgtcctcagccaccagggagccgtgtgcaagtt
ctgccagccccgggagtcagagctataccagaaggaggtgtcccacctgagcgccctgga
ggagcgcttctcacgtctgtggacacagtgccagcgctgccagggcagcctgcacgagga
tgtcatctgcaccagccgggactgtcccatcttctacatgcgcaagaaggtgcggaagga
tctggaggaccaggagcggctgctgcggcgcttcgggcccccaggccccgaggcctggtg
acctctgacctcggcggacttcccaccttgggtgggtgggggggacaggcggggaattaa
DBGET
integrated database retrieval system
