Oryx dammah (scimitar-horned oryx): 120872060
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Entry
120872060 CDS
T07255
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
120872060 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120872060
NCBI-ProteinID:
XP_040108146
LinkDB
All DBs
Position
Unknown
AA seq
2174 aa
AA seq
DB search
MTHSPASSEEEERHSASECPEGGSESDSSPDGPGRGPQGTRGRGSAAPGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQAQPAAPSAK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRI
GWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPG
PGGLASLGKHRPKGFFTTESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPSSGG
THPASSPASFDGPAPPDTRIGSREKSLYHSGPLPPAHHHPPHHPPPPVPPPPPHHHHAHP
PHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGALSPSHHGSGGGAGGPSQAP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVVEGEPQKGGGLPPAPSPTSPASPQ
PPPPPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPSQPEAAGGGGGGG
GSSAPSPAPAVPPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRR
STLFLSTDAGDEPDGGDSSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGSGY
AGYAAGSRAYGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGP
PQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSL
PASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKPWRSGAPPEEPERLPLHV
RFLENCQPRAGGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGSEENGLPLLVLPPPAP
SVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPPAVAA
APPTLDSTASSLTSYDSEVATLTQGGPAASGEPPPPGPPAPAAPAPPPPQPGPDPPPGTD
SGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGGAGGGTGSVGGSGGASVAGGPELLDT
YVAYLDGQAFGGSGPPGPPYPPQLMTPSKLRGRALGAGGGLRPGPGGGLRDPVTSTSPTV
SVTGAGTDGLLALSGCPGSSTAGVAGGPVAVEPEGPPVPLPSASSLPRKLLPWEEGPGPP
PPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHG
GASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWSKPPLPPLPTGTAVSPSAAAAPG
ATSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGP
LYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGSLGGALSGASRSLSPTRLLSLPPD
KPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGH
RMNIDRALKFFLER
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaagaagaggaacgacacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccgggagaggcccccaggggacc
cggggccggggcagcgcagcacctggtagcctggcctcgatccgaggcctccagggccgc
tccatgtccgtcccagacgacgcccacttcagcatgatggtttttaggatcggcatccct
gaccttcaccagacaaaatgcctgcgcttcaaccccgacgccaccatctggacggccaag
cagcaggtgctctgtgccctgagtgagagcctccaggacgtgctcaactatggcctgttc
cagccggccacctcgggccgggacgccaacttcctggaggaggagcgactgctgcgggaa
tatccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgtgtt
tacaagcagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacatccgataaggtggcacggctgctggac
aaggggctggaccccaattatcatgactcagattcaggagagacccccctgacgctggct
gctcagaccgaaggctctgtagaggtgattcgaaccctatgcctgggtggggcgcacatc
gacttccgggcccgggatggcatgaccgcgctacacaaggccgcctgtgcccgccactgc
ctcgctctgacggcgctcctggatcttgggggctctcccaactacaaggaccgccgaggg
ctgactccgctgttccacacggctatggtggggggtgacccccgctgctgcgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcatctggagcatctgctcttctacggagctgagcct
ggagcccagaacgcctcggggaacacggccctgcacatctgtgccctctacaataaggag
acgtgtgctaggatccttctctaccgaggggccaacaaggatgtcaagaataacagtgga
cagacccccttccaggtggcagtgatcgctgggaactttgaactcggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcga
cggggacccccgggcacagggctgacagtgccccccgctctgctgcgggccaacagcgat
accagcatggccctgcccgactggatggtgttcgccgccccagggacctcgtccgcgggg
gcccccggccccacctcagggccccagggccaggcgcagcccgccgcccccagcgccaag
ctcagcagcgggaccctgcgaagtgccagcagcccccggggcgcccgggcccgctccccg
tcccgcgggaggcaccccgaggaggccaagcgccagccccgtggacggcccagctccagc
gggacaccccgggaagggccggccgggggcacagggggctctgggggccccgggggctcc
ctgggcagccgcgggagacgcaggaagctctactcggcggtccccggacgctccttcatg
gccgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgaaaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcatc
ggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaagcaaagcaa
gaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcatcaaa
gagaagacagttctgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggc
gccaaggcgcagacccccatcgaggagttcacccccaccccagccttcccggcactgcag
tatctggagtcggtggacgagggtggcgtggcatggcgggctggactgcgaatgggagac
ttcctcatcgaggtgaacgggcagaacgtggtgaaggtcggccaccggcaggtggtgaac
atgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaagctgttcacaagaaagcaccccagcaagctaagcggctcccgccccca
gccatctccttgcgttccaagtctatgacctccgagctggaggagatggagtacgagcag
cagccgccgccggtgcccagcatggagaaaaagaggactgtgtatcagatggctctcaac
aaactggatgaaatcttggcggcagctcagcagaccatcagtgcaagcgagagtcctggg
cctggtggcctggcgtccctgggcaaacaccgacccaaaggcttctttaccactgagtcg
agctttgatccccaccaccgctcccagccaagttacgaacgtccttcctacctgcctcct
ggacccgggctcatgctccggcaaaaatctattggggctgcagaagacgatagaccctac
ctagcacccccagccatgaagttcagccgcagtctgtctgtgcctggttcggaggacatc
cccccgccgcccaccacgtccccaccagagcccccctacagcacgcctccagccccgtcc
tcctccggccgcctcactccctctccccgcggtgggcccttcaaccccagctcaggtggc
acccacccagcctcgtccccggcgtcctttgatgggcccgccccccctgacacccggata
gggagccgagagaagagcctgtatcacagcgggcccctgcccccagcccaccaccacccg
ccccaccacccccccccccccgtcccgccccccccgccccaccaccaccacgcccacccg
cctcacccgcctgagatggagaccggcggctcccccgacgaccccccaccccgcctggct
ctggggccccagcccagcctacgaggctggcggggcggcgggcccagcccgaccccgggg
gccctgtccccgtcgcaccacggcagcgggggcggcgccggcggcccctcccaggctccg
gcgctgcgctacttccagctgcctccgcgggcggccagcgcggccatgtacgtgcccgcc
cgttccggccgcgggcgcaagggcccgctggtcaagcagaccaaagtcgtcgaaggcgag
ccccagaagggcggcggcctcccgcccgccccctcgcccacgtctccggcgtccccgcag
ccaccgccgccaccgccgccggccgcggccgccccgtcggaaaagaactccatccctatc
cccacaatcatcatcaaggcgccgtccaccagtagcagcggccgcagcagccagggcagc
agcaccgaggcggagcccccgagccagcccgaggccgcgggcggcggcggcggcggcggc
ggctcttccgcgcccagccccgccccggccgtgccgcccgtgccgccgtccccctcgccc
gtgcccacccccgcctcgcccagcggcccggccaccctggatttcaccagccagttcgga
gcggccctggtgggggcggctcgaagggaagggggctggcagaacgaagcccgccggcgg
tccacgctcttcctctccaccgacgcgggggacgagcccgacggcggcgacagctcactg
ggcccaggggcgcccccgggcccccggctgcgccactccaagtccatcgacgaaggcatg
ttttcggccgagccctacctccggctggagtcggcgggcgccggcagcggcagcggctac
gcgggctacgcggccggcagccgagcctacggcggcagcagcgccttcaccagcttcctg
ccgccgcgacccctggtccacccgctgaccggcaaggccctggacccggcctccccgctc
gggctggccctggccgcccgggagcgggcgctgaaggagtcctcggagggcggtgggccc
ccccagccccctccaaggcctccatcgccccgctacgaggccccgccgcccaccccgcac
caccactcgccccacgcccaccacgagccagtgctgcgcctctggggagcctcgcccccg
gacccggcccgccgggagctggggtaccgggcagggctgggcagccaggagaagtccctt
ccggccagcccaccggcggcccgacgctccttgctgcaccgcctgcctcccacagctccc
ggggtcgggcccctcctgctgcagctggggcccgagcctcccgccccgcaccccggggtg
agcaagccctggagatccggcgccccgccggaggagcccgagcggctgcccctccacgtg
cggttcctggagaactgccagccacgggccgggggggcgggtggaagggggcccccctcg
gaggacgggccgggggtcccgccgcccagcccgcgccgctctgtgccgccctcaccgacc
tccccgcggggcagtgaagagaacgggctccccctgctggtcctgccgccgcccgccccc
tcggtggacgtggaagacggcgaattcctctttgtggagccgctgcccccgcccctcgag
ttttccaatagcttcgagaagccggagtcgcctcttacgccggggcctccccacccgctg
ccggacccacccaccccgaccacccccttgccccctgtgccgcccccggccgtggccgct
gcccctcccaccctggactcgaccgcatccagcctgacttcctatgacagcgaggtggca
acgctgacccaggggggccccgcggcttctggggagccccctccgccaggccctcccgcc
ccagccgccccggctcccccacccccccagcctggcccagaccctcccccgggcacggat
tctggtattgaggaggtggacagtcggagcagcagcgaccaccccctggagaccatcagc
agcgcctccacgctgagcagcctgtccgctgaaggcgggggcggcgcagggggcggaacc
ggcagcgttggaggcagcggtggcgccagcgtggccggtgggccagagctcctggacacc
tacgtggcctacctggatggccaggccttcgggggcagcggccctcctggccctccctac
cccccgcagctcatgactccctctaagctccggggccgggcgctcggggccggcggaggc
ctgcggccgggacctggtgggggactccgagaccctgtcacttccaccagccccactgtc
tcagtgacgggggcgggaaccgatgggctgctggccctgagcggttgtccgggatcctcg
acggcaggcgtggctggcggccccgtggctgtagagccggaaggtccgccagtgcccttg
ccatcggcctcctccctgcctcggaagctgctgccctgggaggagggcccgggcccgccg
ccgccccctctgccggggcccttagcccagcctcaggcctcagccttggccactgtaaaa
gccagcatcatcagtgaactcagctccaagcttcagcagtttgggggctcctcggcagct
ggtggcgctctgccctgggcccggggaggcagcgggggaagcggggacagccaccacggg
ggagccagctacgtccctgagcggacttcctccctgcagcggcagagactctccgaagac
tcccagtcctcgctcctctccaaacctgtgagcagcctgtttcagaactggtccaaacca
cctctgccgccgctccccacgggaaccgcggtgtccccttcagccgctgcagccccgggg
gccacctccccatcggcttcctcctcctccacgtccgcccgccacctccagggcgtggag
ttcgagatgcgcccacctttgctccgccgggcccccagcccctcattgctgcccgcctcg
gagcacaaggtcagccctgcgccccggccctcgtccctacccatcctgccttccggaccc
ctctacccgggcctctttgacatccgaggctcccccaccggaggggcaggaggctcggcc
gaccccttcgcccccgtctttgtaccgccgcaccccgggatgtccgggagtctcggcggg
gccttgtcaggggcctcccgctccctctcaccgacccgcctgctttccctgcccccggac
aagccgttcggcgctaaacctctgggcttctggaccaagttcgatgtggctgactggcta
gagtggctgggcttggccgaacaccgggcccggttcctggaccacgagatcgatggctcc
caccttcccgccttgaccaaggaggactacgtcgatttgggggtgaccagggtgggacac
cgcatgaacatcgaccgggctctcaagtttttcctggagaggtga
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