Oryx dammah (scimitar-horned oryx): 120872183
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Entry
120872183 CDS
T07255
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120872183 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120872183 (VPS8)
Membrane trafficking [BR:
oda04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120872183 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
zf-C3H2C3
zf-RING_5
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
120872183
NCBI-ProteinID:
XP_040108317
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSFCAKTTDEDLNKSFSLEASLSKFSYIDLDKELEFRNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKKKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAIVADRMVEILLHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
VYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQIVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEAPPEEEIYPYIRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGYSAEEKQSVWQK
AMDHIEELVALKPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
LLQISPCIIEQFIELLCQFSPNHVIETLQVLECYRLEETIQITQKYQLCEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEIIHQDENTKEDPSLKDVEETMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSSSAAPHPHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQSKECTIEIEGQTRWTCYKCSSSNKAGKLSE
NSSEVTKGRITPSQVKMSPSCHLSKGDPAVKKATSEPVLDPQQIQAFDQLCHLYRGSSRL
ALLTELSQNRSGESCRPFGGSQSGPAFNSIFQKENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacaaagcttctgtgccaagactactgat
gaggatctgaacaagtctttcagtctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcagaaatgatctgattgatgataaggagttcgatattcct
caggttgatactcctccaacactggaaagcatactaaatgaaactgatgatgaagatgaa
tcttttgttcttgaagatcctacattgttaaacattgatactattgattctcactcttat
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacttaaaaaaaaagaag
aaattacctgattctttttcactccatggatcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtatccagtttgatagcagtgggtacatctcatggattggccttaatatttggaaaa
gatcagaatcaagctttgcgactctgcttgggtagcactagtgttggaggtcagtatgga
gctatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaag
ggacagatcactatgtgggatttggccagtggaaagcttctaagatcaataacagatgct
catcctccgggaacagcaatattacatattaagtttacagatgatccaactcttgcaatt
tgcaacgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acttgtgaatctcgatgcctgtttagcggttccaagggtgaagtttgctgtattgaacct
ctccactctaagcccgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaagccatccttgaaagtgtggatgact
tttccttatggacggatggatccttccagcgttccgttgctggcctggcactttgtggca
gtgcataattacgtgaatcccatgcttgctttctgcagaggagatgttgttcattttctc
ctggttaagagagatgagtctggagcgatacatgttactaagcaaaagcatcttcaccta
tactatgacctcatcaactttacttggataaactcacgcacaattgtgctcttggacagt
gtagagaagttgcatgtgattgatcggcaaactcaggaggagctggaaacagtggagatc
tcagaagttcagttggtctataatagcagccatttcaaatcactagccactggaggaaac
gtgagccaggcactggctttggttggagagaaggcttgctatcaatccataagtagctat
ggtggtcagatcttttatttgggaacaaaatctgtttatgtgatgatgctgaggagctgg
agggagagagtggatcacctcttgaaacaagactgtcttacagaagctttggctctggca
tggtctttccatgaaggaaaagcaaaagcagtagtaggattatcaggggatgccagtaag
cgaaaggctattgttgcagatcggatggtagaaatcctattgcattatgcagaccgagct
ctaaaaaagtgcccagaccagggaaaaatccaagtgatggagcaacattttcaggatatg
gtacccgtcatagttgattactgccttctgctacagcggaaggatcttttatttagccag
gtgtatgacaaattaagtgagaattcagtggccaaaggagtgtttctggagtgccttgaa
ccatatattttaagtgataaattggtggggatcacaccccaggtaatgaaagacttgatt
gttcatttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcagatagttctcatgtgttgggaaaatcgactatatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgcacctcctttgaatgcaggaaagacgctaacagatgagcaagttgtt
atgggcaacaagcttcttgtatatattagctgttgtctagcaggtcgtgcctatccgctg
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctaatt
cgcctgcattcaacagaagctccccctgaagaagaaatctatccctatattcggactttg
ttgcatttcgacacacgagaatttctaaatgtattggcgctgacttttgaagattttaaa
aatgataagcaagctgtagaatatcaacaacgtattgtagatattttgttgaaggttatg
gtggagaattcagattttacgccctcacaagtagggtgtctctttaccttccttgcccgg
cagcttgcaaagcctgataacaccttatttgtaaacagaactctttttgatcaggtcctt
gaattcctttgtagtcccgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagaatcgactcatccgtatggca
gagaaagcagaattctaccaaatttgcgaattcatgtatgaacgagaacaccaatatgac
aaaattattgactgctacttacgtgacccactaagagaggaagaagtctttaactacatt
cacaatatcttatccattcctggatacagtgcggaggagaagcagtctgtatggcagaag
gctatggatcatattgaggaacttgtggccctgaagccctgtaaagctgcagagctggtt
gctactcacttttctgaacagatcgaaacagtcattaagaaacttcagaaccaggttttg
cttttcaagtttttgagaagccttcttgacccaagggaaggtattcatgtaaatcaagaa
ttgctgcagatatctccctgtatcatagagcagttcattgaactcctgtgtcagttcagc
ccaaaccacgttattgagacgctgcaagtccttgagtgctaccgcctagaagaaactatt
cagattacccagaagtatcaactttgtgaagtcactgcttatctattagaaaagaaagga
gatattcatggtgccttcttaataatgctaaagagactacagagcaaacttcaagagata
atacatcaagatgaaaataccaaagaggatccctcattgaaggatgttgaagagaccatg
gtagagacgattgccctctgccagagaaattcacataatttgaaccaacagcagagagag
gcactctggtttccattattggaggcaatgatggcccctcagaagctgtctagttcagct
gcacctcatccacactctgaagctctgaaatctttgaccatgcaagttctcaacagtatg
gcagcatttattgcccttccatccatcctgcagcgaattttacaggacccagtttatgga
aaaggaaaacttggagaaatccagggccttattctgggaatgttggatacctttaactat
gaacagaccctgctggaaacgacaactagccttctaaaccaagatctccattggtcattg
tgtaacctgagagcttcagttaccagaggactgaatcccaagcaggattactgctctatt
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaattattgtctttagctgt
ggccatttatatcactcattctgtctgcaaagcaaagagtgcaccatagaaattgaaggg
caaacgagatggacgtgctacaaatgcagctcaagtaacaaagcaggaaagctgagtgaa
aattcatctgaagttacgaagggaaggataaccccatcacaggtaaaaatgtccccatcc
tgtcatctgtccaaaggggatcctgctgttaaaaaggcaacctcagaacctgttctggat
ccacagcaaatccaagcgtttgatcagctctgccatctctaccgaggaagttccaggctg
gccctcctcacggaactctcccagaatcgcagtggcgagagctgcaggccatttggaggg
tcccagagtggccccgccttcaacagcatcttccagaaggagaacttccagctgcagctc
atccctcccccggtgaccgaggactga
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integrated database retrieval system
