Oryx dammah (scimitar-horned oryx): 120872902
Help
Entry
120872902 CDS
T07255
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oda03036
]
120872902 (CHD9)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120872902 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
120872902
NCBI-ProteinID:
XP_040109509
LinkDB
All DBs
Position
Unknown
AA seq
2900 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLPDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQPGHSHSMHQTKSFVAHHDFALFQANEQQTQCASLRSQ
QNRNNLNPGQNSLSQSKTFMDVNVSGPHRVSVNHPPQMNNASTSQQSLSMQQFSQTSNPS
VHFLKCSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQPSAVLAPNHT
SQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYNSKLSPVHM
NFPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQFD
ESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDMVQTQLHNQARSWHSSLSNHQHLHDRNRL
CLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAKE
RGERNIPRVMSPENFPSASLEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLII
TLGKKQKRKNESSDEISDAEQMTQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEIK
GSVKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRTIKKEISPGVMIDTEEFFVK
YKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVL
EVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDR
PPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL
YEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQ
GRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE
HKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMME
LRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR
ASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDI
DQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISG
RNSLVIDTPRIRKQTRPFSATKDELAELSEPESEGDEKPKLRRPCERSNGYGRTECFRVE
KNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITP
TEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKH
IKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDA
DKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKP
APAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKNR
QIQQIQPTFPVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDP
DRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEE
RASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGSHDRDLLIGAAKHGV
SRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPKA
VILEDVKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKGE
TDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSH
SRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHMKAYDE
ESVASLSTTQDETQDSFQMNNGTAESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLK
GKWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSAPPPAGAAVKEEHDQSAQMSKVK
KHVREKEFTVKIKDEGGLKLTFQKQGLAQRRPLDSEDCAPGQQQYLTRLRDLQGASESSL
ASFPKSLSLPGTPIQSTLGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVTL
GLTTSQISTGINPALSYTQPQGIPDTETPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHP
GYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFA
PPLKDLCRFLKENAEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSG
IAKATAAAAAATATSISGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAG
LSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKEVEGRKERT
ESQNPENGGENSVSSSPASSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPT
LSQSNTFDVQKNKNNDLGSSKSVEVKEEDSRVRDQEDKGGTEPSPLHENSTDEGSEKADA
SSGSDSTSSSSEDSDSSNED
NT seq
8703 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgccagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaatcatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatcgccacactctcaattt
aattgttctccaatccacccccagaaccaacccaatggtttgtttccagatgtagcagat
ggcagtcctatgtggggccatcagacagctactagcatttcaaatcaaaatgggtctcct
tttcaccaaccaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacaatgcgcttcgctacgctcacaa
caaaacagaaataatctgaacccagggcaaaattctcttagtcagtctaaaacttttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaatgaacaat
gcatctacttcacaacagtccctttcgatgcagcaattttcccaaacatcaaacccttca
gtacacttcctcaagtgtagcagtcaccaagaaggtaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaatagtcttcttcaaccctctgcagttcttgcacctaatcataca
agtcagactttatctgattttactgggagtaattccttttcacctcataggggaatcaag
caagaatcgactcagcatatgctaaatcctaatacatcactgaattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacaattcaaaattatctcctgtgcacatg
aacttcccggatcctgttgactcaggaactcaaatgggccatttcagtgatcatgtagaa
actaatggcttttcatctttggaagagaatttacttcatcaagtggaatctcaaactgag
ccattcacaggacttgacccagaagacctccttcaagaaggtctccttccccagtttgat
gagtcagcatttgggcaagataattcaagtcatgttttagatcatgaccttgatcggcaa
tttacttcacatcttgtaacacggccttctgatatggttcaaactcagttgcacaatcag
gctcggagttggcattcatccctttctaatcatcagcatttacatgatagaaatcgcctg
tgtttacagcgacagcctccatcttccaagaagagtgatggttctgggacatacactaag
ttgcagaatacccaggtgaggatcatgtccgagaagaagcagagaaaaaaggtggaatca
gaaagcaagcaagaaaaggctaatcgtataatatcggaggccatagcaaaagcgaaggag
cgaggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcactt
gaaggaaaagaggaaaagaaaggaagaaggatgaaatccaagccaaaggacaaagagagc
aaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcattatt
acattgggtaagaaacaaaagagaaagaatgagtcttcagatgaaatatctgatgcagag
cagatgacacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcgacaa
attaaaaggaaaaaatatgcagaagatgcagaagggaagcaatctgaagaagagattaaa
ggctctgtgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacagtta
tttgtggagaatccaagtgaagaagatgctgcaattgtggacaagatactatcttctaga
actataaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgtaaaa
tacaagaattactcttatcttcactgtgaatgggccacagaacagcagctgctgaaagat
aaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacatttt
tttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagtgtta
gaagtctctttttgtgaagataaagatactggcgagcctgttatttactatttagtaaag
tggtgctcattaccgtatgaagatagtacttgggaactaaaagaagatgtagatcttgca
aaaatagaagagtttgagcaattgcaagcttcaaggcctgacacaagacatttggatcgt
cctcctcctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaatcaa
ctcagggaatatcaactggaaggactcaactggctcttattcaattggtacaatagacga
aactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattcctc
tacgaaatccttctgactggtataagaggacctttcctgattattgctccactttctact
attgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttatcat
gggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactcacag
gggcgtattattcgaggagcttacagattccaagccatcatcaccacttttgaaatgatt
cttggaggctgtggagagcttaatgcaattgaatggcgatgtgtaattattgatgaagca
cataggttaaaaaataaaaactgtaaacttctagaaggtctgaaactcatgaatctggaa
cacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagtctt
cttcactttctggagcccctaaggtttccttctgaatcaacgtttatgcaagaatttggg
gatctgaaaacagaagaacaggtgcagaaacttcaggctatcttgaaaccaatgatgttg
agacgattgaaagaagatgtagaaaagaagttggcacctaaggaagaaaccatcattgaa
gtagaacttactaacattcagaaaaaatactaccgggctattctggagaagaacttttca
tttttatccaaaggagcagggcagactaatgtacccaacttagtcaataccatgatggag
ctcaggaagtgctgtaatcacccgtatcttatcaaaggtgctgaggagaaaatacttgga
gaatttagagatacatataacccagctgcttctgattttcatcttcaagcaatgatccag
tctgctggtaaattggtccttattgataaattgcttcccaaaatgaaagcaggaggtcat
aaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatcttata
cataaaagatatttatatgagcgaattgatggaagagtcagaggaaatcttcgacaagct
gctatagatcgatttagtaaacctgattcagatcgatttgtctttcttctgtgtacccga
gctggtgggttgggcatcaatttaactgcagctgatacatgtataatttttgattctgat
tggaatcctcaaaatgaccttcaggcccaagctcgttgccacagaattggtcagaataaa
gcagttaaagtctaccgactagtgactcgtaactcatatgaaagagagatgtttgaccga
gccagtctgaaactgggtctagataaggctgtgttacagagcatgagtggaagagaaagt
aatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaagaggt
gcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaagatatt
gatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtgggtca
acatttgccaaggcaagttttgtggcatctggaaaccgaacagatatttcattagatgat
cccaacttctggcaaaaatgggcgaaaaaggcagaaatagatatagatgccatcagtggt
agaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttcagtgcc
acaaaagatgagttagctgaattatctgaacccgaaagtgaaggagatgaaaagcccaaa
cttcggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagtagag
aaaaatctgctagtttatggatggggccgatggagagagattctgtctcatggccgtttt
aaaaggcagctaaacgagcatgatgtagaaataatttgccgagccctcttagcatattgc
cttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattactcca
actgaagacgggcagacacgagagctacagaatcatctaggcctgtcagccccggtacca
agaggtagaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaagca
gaatggcttcgaaaatacaatcctgagcaactacttcaagatgaaggctacaaaaaacat
ataaaacaccactgtaataaagttttgcttcgtgtaagaatgctgtattatctaaagcaa
gaagtcattggaaatgagtgtcagaaagtttttgatggagttgatgcaagtgacattgat
gtttgggtcccagaaccagaccactcagaagttccagctgagtggtgggattttgatgct
gataagtcactcctcattggagtttttaaacatggttatgaaaagtataacactatccga
gcagacccagcattgtgcttcttggaaagagtgggaaaacctgatgagaaagcagttgct
gcagaacagagggcaaatgattatatggatggggatgtggaagatccagaatacaaacct
gccccagctatctttaaagatgatatagaggatgatgtttcctcaccaggagatcttgtt
atagcagatggagatggtcagctgatggagggtgataaaatttattggcctactcagtca
gctttaactacccgtttgaggcgtctcattactgcatatcagcgtaccaataaaaacaga
caaatccagcagatacaacctactttccctgtgcctgccagtgttatgcagcctctttat
gaagaagccacccttaaccctaaaatggcagccaagatagaaagacagcagagatggaca
aggagagaagaagctgatttttacagagttgtatctacatttggagtggtatttgatcct
gacagaggccagtttgattggacaaaatttagggctatggctcggctacataagaaaact
gacgatagcttggagaaatatctgtacgcattcatgtctatgtgtcggagggtttgtcgt
cttccttccaaagaagaattggtggatccaagtatttttatccagcctatcacagaagaa
cgtgcttctcggactttatatcgcattgaacttctaaggaaagtaagggaacaggccctc
cgacatccacaattgtttgagcgcttgaagctttgccatccaaatccagacttaccagtc
tggtgggaatgtggctctcatgatagggacttgctcattggagctgctaaacacggggtg
agccgaacagactatcacattcttcgggaccctgaactctcatttatggccgctcagagg
aactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaatat
caagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaagct
gttattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagtcttct
gaagaagagtctatgtcttctgaggaaaccaggacactaataaagtctgagcctgtaagt
ccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggtgaa
acagacagacgcatggttgcagccagaacagagcctctaactccaaatccggcttctaag
aagcagcgagtccacaaaagaggatcagagtctagttctgattctgactctgattctgag
agatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcttcgtgttcccac
tctcgatcaggctctagctcctcttcctcctcctcttgttcttcagcatcatcttcatcc
tcatcctcatcttcctcttcctcatcctcctcctcatcttcgtcagaagaaagtgacagt
gaagaagaggaagtccaaaagcgagcagaaggtacccctcacatgaaagcctacgatgaa
gaaagcgtcgcatcactgagcactacccaggatgagacccaggatagtttccagatgaac
aacgggaccgcagagtctgcttacatcctacagggtggatacatgctggcagcatcatac
tggccaaaggatcgtgtgatgatcaaccggctggacagtatttgtcaaacagtcctgaaa
gggaagtggccttcagctagaagaagttacgatgccaacgcagtggcttctttctatacc
acaaagctgctggacagctctggtgcagccacagaatatagcgagcccagcgcgccccct
cctgcaggtgctgcagtcaaagaagaacatgatcagtcagcacagatgtcaaaggtgaag
aagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaagttg
acatttcagaagcaagggctcgctcagagaaggccactggacagtgaagactgtgctcct
gggcagcagcagtacctcactcgactccgggaccttcaaggtgcgtcagagagcagcctc
gccagtttccccaaatccctatcactaccaggtactcccattcaatcaacccttggtgcc
aatggagttttattagacaaccagcctgtagtcaaaaaaaggcggggaaggaggaagaat
gtagaaggtgttgacatcctcttttttaacagaaataaaccacctaatcatgttacgtta
ggcttaaccacctcacagatttctacagggataaatccagcactatcctatactcaacct
caaggaattcctgatacagaaactcctgttccagttattaaccttaaagatgggacgaga
cttgcaggcgatgatgcaccgaagagaaaggatttggaaaagtggcttaaggagcaccca
ggttatgtggaagatttaggagcttttattcctagaatgcaactccatgaggggagaccc
aaacaaaaaaggcatcgctgcagaaaccccaataaattagatgttaatagtctcactgga
gaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgcatttgct
ccccctttgaaagatttgtgtcggttcctgaaagaaaatgcagaatatggtgtagctcct
gaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtatgaacgtatt
ctcactggtcccgtggtaagagaggaagtaagcaggcgagggagacgacctaaaagtgga
attgcgaaggccacggcggcggcagcagctgcaactgccaccagtatttcaggcaatcct
ttgttagccaatggattacttccaggtgtggacctcacaactcttcaggccttacaacaa
aacctacaaaacttgcaatcactgcaagtgactgcagggctgatgggaatgcctgctggc
ctttcttctggaggagaagctaaaaatgtggccgccatgttccccatgctgctgtcggga
atgactggcttgccaaatctgttgggcatgggagggctcctgacaaagccgacagaatcc
ggaacagaagaaaaaaagggaaatgactctaaggaggtagaagggagaaaagaaaggaca
gagagccaaaaccctgagaacggcggtgaaaactctgtgtcgagttctcctgcatcctct
actgctgcgttaagtacagctgcagctgccagcccattagctctgaacccactgttacta
tctaatattctttatccagggatgcttctcactccaggccttaatcttcatattccaact
ttgtctcagtccaacacttttgatgtacagaaaaacaaaaacaatgacttaggctcatct
aagtctgtggaagtaaaggaagaagattccagagttagagatcaggaagacaaaggggga
actgaaccgagtcctctccatgaaaacagcacagatgagggttcagagaaagccgatgct
tcatctggatctgatagtacatcatcgtcatccgaggattcagattctagtaatgaagac
tga
DBGET
integrated database retrieval system
