Oryx dammah (scimitar-horned oryx): 120873021
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Entry
120873021 CDS
T07255
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120873021 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120873021 (CNOT3)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120873021 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120873021 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Not3
Motif
Other DBs
NCBI-GeneID:
120873021
NCBI-ProteinID:
XP_040109710
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAGAAPPPPRGPGARRPPGGSAVGVGSVGGGGLGAWGLRQALGASGAPPPLSRARARQQK
QDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEEN
EFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENS
EDDKKRGRSTDSEVSQSPAKNGSKPIHSSQHPQSPAVPPSYPPGPPPAASALSAAPGSNG
APAVAAPVSALGSKASPAPSHSAGTPAPYAQAVAPPAPSGAPSTQPRPPSAQPGAGGGGG
GNSGGGGGAGKQNGATSYSSVVADSPAEAALSSTGGSSTGSQALGPPPGPHNPPPSTAKE
PSATAPVGAGGVAPGSGNNAGGPSLLVPLPVNPPSSPTPSFSEAKAAGSLLNGPPQFSAA
PEIKAPEPLSSLKSMAERAAISSGIEDPVPTLHLTERDILLSSTSAPPASAQPPLQLSEV
NIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQ
MPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEE
PKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcggcgcccccgcccccgcgcggccccggcgctcgccgtccgccgggcggc
tctgcagtgggggtgggctctgtgggtgggggtgggctcggggcctggggactgcggcag
gctctgggggcgtccggggccccgccgcccctgagccgggcccgggctcgccagcagaag
caggaccggatcgagggcctgaagcggcacatcgagaagcaccgctaccacgtgcgcatg
ctggagaccatcctgcgcatgctggacaacgactccatcctggtggacgccatccgcaag
atcaaggacgacgtcgagtactacgtggactcgtcccaggaccccgacttcgaggagaac
gagttcctctacgacgacctggacctcgaggacattccacaggcgctggtcgccacctcc
ccccccagccacagccacatggaggacgagatcttcaaccagtccagcagcacacccacc
tcgaccacctccagctcgcccatcccgcccagcccggccaactgcaccacggaaaactca
gaagacgacaagaagagggggcgctcaacggacagtgaagtcagccagtctccagccaaa
aacggctccaagcccatccacagcagccagcaccctcagtccccggctgtgccgcccagc
tacccgcccggccccccgcccgccgcctccgccctgagcgccgcccctggcagcaacggg
gccccggctgtggccgcccccgtgagcgccctgggtagcaaggccagcccggcgcccagc
cacagcgcaggcacccctgccccctacgcacaggctgtggccccgccagcccccagtggg
gcccccagcacccagccccggccccccagtgcccagcctggggcaggaggcggcggtggg
ggcaacagtggcggaggcgggggcgccggcaagcagaatggcgccaccagttacagctcg
gtggtggcagacagcccggcggaggcagcgctcagcagcacggggggcagcagcacgggt
agccaggccctgggccccccgcccggcccccacaacccaccccccagcaccgcgaaggaa
cccagtgccacagccccagtgggtgccgggggcgtggctccaggctcagggaacaacgca
gggggacccagcctcctggtgccgctccctgtgaacccccccagctccccaacgcccagc
ttcagtgaggccaaggcagctggcagcctgctgaacgggcctccgcagttcagcgccgca
cccgagatcaaggcccccgagcccctgagctcgctgaagtctatggcggagcgtgcggcc
atcagctctggcatagaagaccccgtacccacgctacacctgaccgagcgagacatcctc
ctgagcagtacatcggcacccccagcctcggcccagccccccctgcagctgtcggaggtg
aacatcccgctgtcgctgggcgtgtgtcccctgggcccagtgcccctcaccaaggagcag
ctgtaccagcaggccatggaggaggccgcttggcaccacatgccccacccctcggactcg
gagcgcatccggcagtacctgccccggaacccctgtccgacgcccccctaccaccaccag
atgccacccccacactcggacactgtggagttctaccagcgcctgtccaccgagacgctg
ttcttcatcttctactatctggagggcacgaaggcgcagtacctggcggccaaggccctg
aagaagcagtcttggcggttccacaccaagtacatgatgtggttccagaggcacgaggag
cccaagaccatcacagacgagtttgagcagggcacctacatctactttgactacgagaag
tggggccagcggaagaaggaaggcttcacctttgagtaccgctacctggaggaccgggac
ctccagtga
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