Oryx dammah (scimitar-horned oryx): 120873587
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Entry
120873587 CDS
T07255
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120873587 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120873587 (TAF5)
03036 Chromosome and associated proteins [BR:
oda03036
]
120873587 (TAF5)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120873587 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
120873587 (TAF5)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120873587 (TAF5)
STAGA complex
120873587 (TAF5)
TFTC complex
120873587 (TAF5)
SAGA complex
120873587 (TAF5)
SLIK complex
120873587 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
VPS8_N
PROPPIN
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
120873587
NCBI-ProteinID:
XP_040110260
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGTTNSGPNGGGGNVAAASSAGGD
GGTPKPSVAVSAVAPAGAAPVPAAAPEASAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEADSAGAETASALLSRVTASAPGPSAPDPPVSGASGSAAVSGLATG
SVAPGKVGSVAVEDQPDVSAVLSAYSQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcagaggagcagacggaggtggcggtgaagttagagcctgagggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggcggcacaacc
aacagcggccccaacggcggcggcgggaacgttgcggcggcgtcgtcggccggcggggat
ggtgggacccccaaaccctcggtggctgtctccgccgttgcaccggcgggggcggccccg
gtgcccgccgctgctccggaggccagcgctccccacgaccgacagactctgctcgccgtg
ctgcagtttctacggcagagcaacctccgcgaggccgaagaagcgctgcgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccgggagaggcagacagcgccggc
gctgagacggccagcgcgcttcttagccgggtcaccgcctcggcgcccggcccttcggcc
ccggatcctccggtcagcggcgcttcggggtccgccgccgtctcgggcttagcgacaggt
tctgtggctccgggtaaagttggaagtgtagctgtggaagaccagccagatgtcagtgcc
gtgctctcagcctacagccaacagggagaccccacgatgtatgaagaatactatagcgga
ctgaaacacttcattgaatgttccttggactgccatcgggcagaactatcccaactcttt
tatcccctatttgtacacatgtatttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgagactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggcttattaaaagagcca
gaaattgaggtgcctttggacgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaaaaagaagcctaaaaaagatagtattggatccaaaagtaaaaaacaagatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattggataag
ataatgaatatgaaagaaaccacaaaacgagtacgcctggggccagattgtttaccttcc
atttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gattctagtttgatcgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctgatagataaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacggcaagtgagttgaagatcttgtac
ggtcacagtggtcctgtctatggagccagcttcagtccagataggaactacctgctctcc
tcttcagaggatggaactgttagattatggagtcttcaaacatttacttgcttggtggga
tataaaggacacaactatccagtgtgggacacacagttttctccatatggatattatttt
gtatcagggggccatgacagagtagctcggctctgggctacagatcactatcagccttta
cggatatttgctggccaccttgctgatgtgaattgtaccagattccatccaaattctaat
tatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatgggaac
tgtgtaaggatattcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggtttgatggttggagaattaaaaggacacactgatacagtctgttcacttagatttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtacggttatgggatgct
gtcaaagcatttgaagatgtagagactgatgactttactacagccacggggcatataaat
ttacccgagaattcacaggagttattgttgggaacatatatgaccaaatcaacaccagtt
gtacacctccattttactcgaagaaacttggttctagctgcaggagcttacagtcctcaa
taa
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integrated database retrieval system
