Oryx dammah (scimitar-horned oryx): 120873772
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Entry
120873772 CDS
T07255
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120873772 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120873772 (CSTF2T)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120873772 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
120873772 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120873772
NCBI-ProteinID:
XP_040110612
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQTVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERGQVQIS
DPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHAA
GHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVL
ETRVMERRGMETCAMETRGMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMGAGGP
QGPRQVPNISGVGNPGPGMQGAGMQGGGMQGAGMQGGGMQGPGMQGGGMQGPGMQGGGMQ
GPGMQGASMQGPGIQGAGMQGPGMQGAGMQGPGMQGAGKQGGGQPSSFSPGQSQVTPQDQ
EKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGTS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcgactgaggagcagttaaaggacattttctcggaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcacttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccctatcgat
ccagaagatgctcctgagtcgattaccagagcagtcgctagtcttcccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaacccgcagctggcttatgcgctgttgcaggcacaagtagtgatgaga
atcatggatccagagattgctctgaaaattctgcatcgcaaaattcatgtcacaccactc
atcccagggaaatctcaaaccgtttctggccctggccctgggctctgtcctggacctaac
gttctgctgaaccagcaaaaccccccggcccctcagcctcaacatttggccagaagacct
gtgaaagacatccctcctctgatgcagacccctatccaaggtggaattccaccccaaggc
ccaatgccagccgcagttcctggccctggccccttaactcctggcggaacaatgcagccc
caagttggaatgccaggggttggtcccgtgcccttagagcgcgggcaggtgcagatatct
gatcccagagctcctatgcctcgtgggcccatgactgctggtggcctgcctcctcgagga
ctgttaggggatgctccaaatgacccacgtggagggactttgctttcagtcaccggagaa
gtggagcccagaggctatcttggcccaccacatcagggtcctccaatgcaccatgctgct
ggtcatgacagccggggcccttcctcacatgagatgaggggagggcccttagcagatcct
agaatgctcatgagtgagcccagaggacctatgatagatcaaagagggctacctatggat
ggcagaggcagcagagactctcgagggatggagactcgagccatggaaacagaggtctta
gagacacgggtgatggagagaagaggaatggagacctgtgcaatggaaaccagaggaatg
gaagcgagaggcatggatgcaagaggaatggagatgaggggccctggccccagttcgaga
ggccctatgactgggggaattcagggtcctggtcctattaatatgggggcaggtggtcct
cagggacccagacaggttcccaacatttcaggggtgggaaaccctggacctggcatgcag
ggggcaggtatgcaaggaggtggcatgcaaggggcgggcatgcaaggaggtggcatgcag
gggccgggcatgcaaggaggtggcatgcaggggccgggcatgcaaggaggtggcatgcag
gggccgggcatgcaaggagctagcatgcagggcccgggcattcaaggagcaggcatgcag
gggcctggcatgcaaggagcaggcatgcaggggcctggcatgcaaggagcaggcaagcaa
ggtggaggccagcctagcagttttagtcctgggcagagccaagtaaccccccaggatcaa
gaaaaggcagctttgatcatgcaggttcttcagctgactgcagatcagattgccatgctg
cctcctgagcaaaggcaaagtatcttgattttaaaggaacaaatccagaaatctactgga
acttcttga
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