Oryx dammah (scimitar-horned oryx): 120875510
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Entry
120875510 CDS
T07255
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120875510 (VPS13A)
Membrane trafficking [BR:
oda04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120875510 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Spo16_N
Mer2
Motif
Other DBs
NCBI-GeneID:
120875510
NCBI-ProteinID:
XP_040113337
LinkDB
All DBs
Position
Unknown
AA seq
3173 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWAGAVALKNLEIKENALSQLDVPFKVKVG
HIGTLNLKIPWKNLYTQPVEAVLEDVYLLIVPSSRIKYDPIKEEKQLFEAKQQELKRIEE
AKRKVADQEKQHVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRENPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLVQLDNLFAYWNVKSQLFYLSNYDESLSSLRNGIV
DENIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKIDLDVELHDITIELNKPQYFSFME
LLESVDMMTQNLPYRKFKPDVPLRYHAKEWWAYAICGILEVNIRPHLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSGELLNSLEELEKTLDVFNITIVRQQAEVEVKKAGYRIFREG
AEESEGNKGWFSWMWNWSESHSKQQLDVKPGSLEEILTPKEKRLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIILREQQQKPELLDIVVEEFTTLIVQRPGAQAVKFETKIDSFH
VTGLPDNSTKPRLLSSLDDAGSLLKIMFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLVYIIETQKVLDLKINLNASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELPDLKQGGANREEIMHRAYDSFDIQLTSIQLLFS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDISMPKFKIYGNLPLISLRISDKK
LQGILELIESIPKPPPAAEVNVPVKSSQVQRSTSLGTSQMSQKKFPLLEIPCVEDDSDEE
FFDALCSPLEEPLQSPSGIKSPQQKKLQKPDCFKNMIEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTDIELRTFDLKANAFLKEVCLKCPDYFDENKKPIYLITTLDNTMEDLL
TLEYVKAENNLPATILKNAYNSVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYLEEK
PAPVHIVETEDKGEVIKKIPLKSSKNEDTITLQILAELSCLQIFIQDQKHNISEIKIEGL
DCEIIMRPSVTETNAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKMVSYMGATAGSAYT
DMNVVDMQVNLTVGCIEVVLVKKFLYSILAFIDNFQAGKQALAEATVQAAEMAATGVKEL
AQRSSRMALDVHIKAPVVVIPQSPVSENVFVADFGLITMKNTFHVITKSPTNPPPIIDLI
TIKLSEMRLYRTQYINDAYQEVLDLLLPLNLEVTVERNLSWEWFQEVPCFNVNAQLKPME
FILSQEDITTIFKTLYGNIWYEGDSASHEVTKDESSVTSGPTTASYHPAGTTVVTAAVVE
VHSHASQVKTTLNMSFRTDYLTMVLYSPGPKQTSFTDIRDPSLKLAEFKLENIISTLKMY
TDDSTFSSFSLKNCILDDKRPHIKKATPRMIGLTVGFDKKDMMDVRYRTIRDGWVADIVL
QEMYICASVEFLLTVANVFLEAYTTGTAVETNVQTWSAKEEVPKQQSEKWEMNITIKNPE
IVFVADMTRHDAPALVITTQCEIYWLGDFENDTMTAAIKDLQVRACPFLPVKRKGKITTV
LQPCDLFCQATQISTDPQVLELSVKSLTLKVSPVIINTVITITSALYTAKETIPKETASS
TAHLWEKKDTKDLNMWFLEEPNQAVKRAPMPELVPKGERIKMNIDSIFLVLEAGIGHRTV
PMLLAKSRFTGEGKNWSSLINLHCQLDLEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKMKKKAKKAIVESGTEEENYRVPEYKTVITFYSKDQLNITLSKCGLIMLNNLAEAFTE
AATGSSATFIRDLAPFMILNSLGLNISVSPSESFSVLNVPMAKSYVLKNEESLSMDYMQT
KDNDHFNAMTSLSSKHFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQID
AVEGSKKVTIRSPVQIRNHFSIPLSVYGGDTLLGTASPGSEFNVPLASYRSLLSLKPEDG
DYQMCEGIDFEEMIKQDGTSFKKKCRPINPSRKPFIINIVPEKDNLTYMSVYSEDHWDLP
YIIHLWPPILLRNLLPYKIAYYIEGIEHRIFTLHEGHSAQLCTVQLDKARLHLKLLDYLN
HDWKSEYHINPNQQDISFISFTCVTEIEKTDLDIAVHVTYNTGQTVMAFHSPYWMVNKTG
RMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGPKMEYQVGVTIDLSSFNITRIVTFTPFFLIKNKSKYHISVAEEGNDKWLSVDLEQ
CVPFWPEDASNKLLIQVERSERPPQKIHFNKEESCILLRLDNELGGIIAEVNLAEHSTVI
TFSDYRDGAATFLLVNHTKNDIVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWNC
GKSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFQVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFK
EYAESSPSEEKVIELDTNILVRFTPGATDMKILQPHVTAIRRNYLPALKVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTLDSAPKPFTDVSIVMRSAGHSQISRIK
YFKVLIQEMDLRLDLGFVYAVSELMTPAEVTEKTEVELFHKDIEAFQEEYKIVSLVDSSQ
VSLYEYFHISPIKLHLSVSLSSGGEEAKDSEQHEGQMAVRSLNLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTAELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQ
QKRREAMNKQPAGLREGITRGGKGLVSGFVTGITGIVTKPIKGAQKEGATGFFKGVGKGL
VGAVTRPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPF
IVHERRLRIEAKERVKSVFHAKEFGKIVNFRTPEDARWILRKLEEAREPSPNL
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcagtctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaattggatgtaccgtttaaagttaaagttggc
catataggtactcttaatcttaaaattccatggaaaaacctttatacccaaccagttgaa
gctgtattagaagacgtttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaggaagaaaaacagctctttgaagcaaagcaacaggaattgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcatgtggagaaacaggatactttcaca
gaaaaattaattacccagatcataaaaaatcttcaagtgaaaatttccaacattcatatt
cgctatgaagatgatgtcacaaatcgagaaaaccctctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaactatttcgtaagttagtccaattggataacctttttgcctattggaatgtgaagtct
cagctgttttatcttagtaattatgatgaatcattgagcagcctgaggaatggcattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaaaatagacctggat
gttgagttacatgacataacaattgaacttaataaaccacagtattttagttttatggaa
cttcttgaatcggttgatatgatgacgcaaaatctaccatacaggaaattcaaacctgat
gtacctcttcgttaccatgccaaagaatggtgggcttatgctatttgtggcattcttgaa
gtaaacattcgcccccacttacggatgtggtcctggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaacaagtaagaagccatctggt
gaacttctcaactctttggaggagttggaaaagactttggatgtatttaatataactata
gtaagacaacaggccgaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcagaagagtcagagggtaataaaggatggtttagctggatgtggaattggtcagaatca
catagtaaacaacaactagatgttaaacctggaagtcttgaagaaatattgacacctaaa
gaaaaacgtttgctgtatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagcaatgaagttttttgttcacttgaaaagtatgtctatcattcta
agagaacaacaacaaaaacctgaattgctagatattgtagtggaagaatttactactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaaccaaaatagattcatttcat
gttactggcttaccagataactcaacaaaaccccgcctcctgtcttcattagatgatgct
ggatcactcttgaaaattatgtttgagataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgttatatgatgcaagaacagtgaatagtata
gtagaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctggtatatattattgaaaca
cagaaagttcttgatctcaaaattaacttgaatgcttcatatatcattatcccacaagat
ggtatctttagccctacgtcaaatctccttcttttggatcttggacatctaaaggtgaca
agtaaaattcgttcggaattaccagatttaaaacaaggtggagccaatcgtgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgcttttcagc
agagttggtgataattggaaagaagcacgaaaactcaatgtgtctgcacagcatatcttg
gtacctatgcactttaatgtggagctctctaaggccatggttttcatggatataagtatg
cccaaattcaagatttatggaaacttaccattaatttctttacgaatctcagataaaaaa
ctgcaagggattttggaactgattgaaagcattccaaaacccccacctgcagctgaagta
aatgtgcctgtcaaatcatctcaggttcaaagatctacttctttgggaacatcacagatg
tcacagaagaaatttcctcttttggaaattccatgtgttgaagatgattcagatgaggag
ttttttgatgcactatgcagtccgttggaagagcctcttcaatctccatctggaattaaa
agtcctcaacagaaaaagcttcagaaaccagattgttttaaaaatatgattgagtataaa
ataagatttgaagtgccagaggttttgattcagttctgtcaccttgttggagactgtgaa
ctacctgtggtagaaattaatgtcttaggattgggcacagatattgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgtccagattattttgat
gaaaacaagaaaccaatttatttgattacaacactggataacacaatggaagatctctta
acactggaatatgtgaaggctgaaaataatttacctgcaacaatattgaagaatgcttat
aacagtgttgtgcaactgataaaggtgaatttttcctctttggatattcatttacatact
gaagcacttctgaatacaataaattattttaataatatccttccatatttggaggagaaa
ccagccccagtgcatattgtggagactgaagacaaaggggaggttatcaaaaaaatacct
ttaaaatcatccaagaatgaagatactattaccttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaacataacatttccgaaattaagatagaagggctt
gattgtgaaatcattatgaggccatcagtgactgaaacaaatgcaaagctaaggaatata
attgtcctggactctgacataacagctgtatacaaaaaggctgtttatattaccggtaaa
gaagttttcagcttcaaaatggtttcttatatgggtgcaactgctggttctgcatacaca
gatatgaatgtagttgatatgcaagttaatttaactgttggttgcattgaagtagttctt
gtcaaaaaatttctgtattctatattggcttttatagataattttcaagcaggtaaacaa
gccttagctgaggcaactgttcaggcagcagaaatggctgctactggcgtaaaagaactg
gcacaaaggagttctagaatggcattggatgttcacatcaaagcccctgttgtggttatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaaa
aatacattccatgtaataacaaagagtccgaccaaccccccacccattattgatttgata
acgataaagctaagtgaaatgcgactatacaggactcaatatattaatgatgcataccag
gaagtactggatctactattgccattaaatcttgaggtgacggttgagcgaaatttatca
tgggagtggttccaggaagttccttgtttcaatgtaaatgctcagctaaagcccatggag
ttcattcttagtcaagaagatataacgaccatttttaaaacattatatggcaacatatgg
tatgaaggtgatagtgcttcacatgaggtaacaaaagatgagtccagtgttactagtggt
cctactactgcttcataccatccagcaggaacaactgtagtgacagctgctgtggtagaa
gtacattcacatgcttctcaagttaagacaacactaaatatgagtttcagaaccgattat
ctcaccatggtactgtatagtccaggtcctaaacagacttcctttacagatattcgtgat
ccttctctgaaacttgctgaatttaagttggagaatattataagcactttaaaaatgtat
acagatgactcaacattttcttccttctcattaaaaaactgtattttagatgacaaaagg
ccccatatcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaag
gacatgatggatgtaaggtataggacaatccgagatggttgggtggctgatatagtcctt
caagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacactacaggcactgctgtagaaaccaatgttcaaacatggtctgctaaagaa
gaagtacctaaacagcaatcagaaaagtgggaaatgaatatcactattaaaaatcctgaa
attgtgtttgtcgctgatatgacaagacatgacgctcctgccttagtcattacaacacag
tgtgaaatatattggctaggtgactttgaaaatgataccatgactgctgccattaaagat
ctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgtt
ttgcaaccctgtgacttgttctgtcaggctactcagataagtacagatccacaagtactt
gaattatcagtaaaatccctgacactgaaggtttcaccagttatcataaatactgtgatt
accataacttcagcactttatactgccaaggaaaccatcccaaaagaaactgcttcttct
acagcacatttatgggaaaagaaggatacaaaagatttaaatatgtggtttcttgaagaa
ccaaatcaagctgtaaaaagagctcccatgcctgaattggtacccaaaggagagagaata
aaaatgaacattgattctatttttctagttcttgaggctggaattggtcatagaacagta
cctatgctattggcaaaatcacgtttcacaggggaaggcaaaaactggagctccttaata
aatctccactgtcaacttgacctagaagtacattattacaatgaaatgtttggtgtgtgg
gagcctttgcttgaacccttagaaattgatcagactgaggattttagaccgtggaatctt
ggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaggcactgaagaagaa
aattacagagtaccagaatataaaactgtcatcactttctattcaaaagaccagctaaac
attacattatctaaatgtggccttataatgttaaataatttagctgaggcatttacagaa
gctgccactggatcttcagctactttcataagggatctggcaccttttatgattttaaat
tctcttggacttaatatttctgtttcaccaagtgaatcttttagtgtactcaacgtacct
atggcaaaatcatatgtattaaaaaatgaagagagtttaagtatggattatatgcaaact
aaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaacacttcttcattctg
cttacacctgccaaccactctactgctgataaaatccctttaacaaaagtgggacgacga
ctgtacactgtaagacacagagagtctggagttgaaagatcaattgtttgtcaaattgat
gcagtagaaggaagtaagaaggtaacaattcgctctccagtgcagattagaaatcatttt
tcaataccactttctgtttatggaggagacacgttattgggaacggcttcacctggaagt
gaatttaacgtaccattagcatcttaccgatcactactttctctgaagccagaagatgga
gactatcagatgtgtgaaggaattgactttgaagaaatgataaaacaagatggtacttct
ttcaagaagaaatgtagacctataaacccttccaggaagccatttatcattaatatagtc
ccagagaaagataatttgacatatatgtcagtgtattcagaagaccattgggacttacca
tacataatacatttgtggccacctattctactccgaaatcttcttccttacaaaattgct
tattacatagaggggattgaacatagaatttttactctccatgaaggccattcagcacag
ctttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaat
catgattggaaaagtgaatatcatataaaccctaatcaacaagatattagtttcatcagt
tttacttgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgacttat
aatactgggcagactgttatggcatttcatagtccttattggatggttaataaaactggt
cgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaag
ccagttctcttttcatttcaaccaaagcactttttcaataacaataaggttcagcttatg
gtaactgatagtgaattgtcagatcaattttcaattgatacagttggtagtcatggagct
gttaaatgtaaaggcccaaaaatggaatatcaagttggtgtcactatagaccttagcagt
tttaacattaccagaattgtcacatttacccccttttttttgattaaaaacaaaagcaaa
tatcatatatcagtggctgaagagggaaatgataagtggctttctgttgatttggagcag
tgtgtccccttttggcctgaggatgcttctaataaacttcttattcaagttgaaagaagt
gaaagacctccccaaaagatacattttaataaggaagaaagttgtattttactgcgtcta
gacaatgagcttggaggtattatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcgtgatggagccgctacatttctgttagtaaatcacaccaagaat
gacattgttcagtataagcaaagttccctcagtgaaatagaagattccctccctcctgga
aaagcagtattttatacatgggctgatccagtgggctctagaaagctgaagtggaactgt
ggaaaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttggga
aaaaagaccatttatttagtttcattttttgaaggcttacaacgcataattttattcact
gaagatccaagagtatttcaagtgacatatgaaagtgagaaagcagagttagcagagcaa
gaaattgtgttggcattacaagatgttgggatttctcttgtcaacaattatacaaagcaa
gaagtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaag
aaggcaagatggaagccaatgagtgtaaagcacactgagaaattagagaaggaatttaag
gaatatgctgaatcttcaccgtcagaagagaaggttattgagttggacactaacattctg
gttcgcttcacacctggtgctactgacatgaaaattctgcagccacatgtgacagctata
agaagaaattatctgccagcattaaaagtagaatatagcacatctgcacatcagtcatcg
tttagaattcaaatttatagaatacagatccaaaaccaaatacatggtgctatatttcca
tttgtgttttatcccattaaaccgcccaagtccgtcaccttggattcagcaccaaaaccc
tttactgatgtcagtattgtcatgagatctgcaggacattcgcagatatcacgtattaag
tatttcaaagtgttaatccaagaaatggatctcaggttagatcttggatttgtctatgct
gtatcagaacttatgacaccagctgaagtcactgaaaaaacagaggttgagctttttcat
aaagacatagaagctttccaagaagaatataaaatagtctcattagtagattcatcacaa
gtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttcactg
agttcaggcggtgaagaagcaaaagattcagaacagcatgaaggacagatggcagttcgt
tctttaaatcttttgctgaagagtattggtgccactctcacagatgtacaagatgtagtt
tttaagctagcattttttgaactcaattatcagttccatacaacagctgaactacagtct
gaagtaataagacactattcaaagcaggccattaaacagatgtatgtactcattcttgga
cttgatgttttgggaaatccctttggcttgataagagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactaggactgaaagcactagttggtggagctgttggtggactagctggtgctgcctcc
aaaatcaccagtgctatggctaaaggggtggcagctatgactatggatgaagactatcaa
cagaagagaagagaagccatgaataagcaaccagctggtcttagagaaggcatcactcgt
ggaggaaaaggcttagtttctggttttgtaactggcataacaggaattgttacaaaacca
atcaaaggagctcagaaagaaggagcaactggtttctttaaaggtgttgggaaaggttta
gttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacatttcag
ggaataaaaagagcaacagagacttctgatgaagtggagagtctgcgaccccctaggttc
tttaatgaagatggagttatcagaccttacaggttgagggatggtactggaaatcaaatg
ttacaggtcatggaaaacggaagatttgcaaaatacaaatattttacccatgtcatgatc
aataagacagacatgttaatgattaccaaaagtggtgtattgtttgtaacaaaaggaaca
tttggacagcttacttgtgagtggcagtatagttttgatgagtttaccaaagagccattc
attgttcatgagagaagactgcgcatcgaagcaaaggaacgggtgaagtctgtattccat
gccaaagagtttggaaaaatagttaacttcagaaccccagaggatgcaaggtggatcctc
agaaagctagaagaagcaagagaaccttccccgaacctctga
DBGET
integrated database retrieval system
