Oryx dammah (scimitar-horned oryx): 120875575
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Entry
120875575 CDS
T07255
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120875575 (MEX3B)
04121 Ubiquitin system [BR:
oda04121
]
120875575 (MEX3B)
Enzymes [BR:
oda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120875575 (MEX3B)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120875575 (MEX3B)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120875575 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
120875575
NCBI-ProteinID:
XP_040113405
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MPSSLFADLERNGSGGGGGGGGGGGGGGGETLDDQRALQLALDQLSLLGLDSDEGASLYD
SEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGR
KEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVV
GPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELT
DENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSAS
TDSYFGAGTSGSAAATPRLADYSPPSPALSFAHNGNNNNNGSGYTYAAAAAAAGEASVPS
PDGCPELPPAFDPAPAPPPGAPLLWGQFERSPGGGPAAPASSSCSSSASSSAASSSSVVF
PGGGASAPSSANLGLPVHRRLHPGASCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAY
AAYANGLGAQLPAGLQPSSSDASGSSSSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESE
VIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggagggggcggc
ggcggaggaggaggaggcggcggcggagagaccctggatgaccaaagagctctgcagctc
gcactcgaccagctctccctgctagggctggacagtgacgagggcgcgtctctgtacgac
agcgagccgcgaaagaagagcgtgaacatgaccgagtgcgttccggtgcccagttccgag
catgtcgccgagatcgtggggcggcaaggttgtaaaatcaaagcgctgcgggcaaagacc
aacacttatatcaagaccccggttcgcggggaggagcctgtctttgttgtgacgggcagg
aaggaggatgtggccatggcccggagggagatcatctccgccgccgagcacttctccatg
atccgcgcctcgcgcaataagaacacggcgctgaacggcgcagtgcccgggccgcctaac
ctgccggggcagaccaccatccaggtgcgcgtgccctatcgcgtggtggggctcgtggtg
gggcccaagggcgccacgatcaagcgcatccagcagcagacgcatacatacatcgtgacg
cccagccgcgacaaggagccggtgttcgaggtgacgggtatgccggagaacgtggaccgc
gcccgcgaagagatcgaggcccacatcgccctacgcaccggcggcatcattgagctcacc
gacgagaacgatttccacgccaacggcacggatgtgggcttcgatctgcatcatgggtcc
ggcgggtccggcccaggcagcctctggagcaagcccacccccagcatcacgcccactccg
ggccgcaagcccttctccagctaccgcaacgacagctccagctcgctcggcagcgcctcc
acagactcttacttcggcgcgggcaccagcggcagcgcagccgccaccccgcgcctggcg
gactacagccccccgagccccgcgctcagctttgctcacaacggaaacaacaacaacaac
ggcagtggatacacctacgcggcggcggcggcggcggccggggaggcttcggtgccttcc
cccgacggctgccccgagcttccgcccgcctttgacccggctcccgctccaccgcccggg
gcgccccttctctggggccagttcgagcggtccccgggaggcggacctgcagctcccgcg
tcctcttcctgctcctcctccgcatcttcgtccgctgcttcgtcctcctccgtggtcttt
cccgggggcggagccagcgcgccctccagcgccaacctggggctgccggtgcaccgccga
ctgcacccaggtgccagctgcccgcgcctgtccccgcccttgcacatggccccgggggcg
ggcgaacaccacctggctcgtcgtgtgcgcagcgacccaggcggagggggcctggcctac
gccgcctatgccaatgggctgggggcgcagctgccggcgggccttcagccttcgtcgtcg
gacgcgtccggctcctcatcctcgtccagctcgtcctccagctcgtcctcttcctcctcc
tcctcctccgggttgcggcgtaagggcagccgcgattgctccgtgtgctttgagagcgaa
gtcatcgccgcactggtgccctgcggccacaacctcttctgcatggagtgcgctaaccgc
atctgcgagaagagcgagcccgagtgcccggtctgccacaccgcggtcactcaggccatc
cgcatcttttcctga
DBGET
integrated database retrieval system
