Oryx dammah (scimitar-horned oryx): 120875645
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Entry
120875645 CDS
T07255
Symbol
ACAN
Name
(RefSeq) LOW QUALITY PROTEIN: aggrecan core protein
KO
K06792
aggrecan 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oda00535
]
120875645 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
oda00536
]
120875645 (ACAN)
04091 Lectins [BR:
oda04091
]
120875645 (ACAN)
Proteoglycans [BR:
oda00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
120875645 (ACAN)
Glycosaminoglycan binding proteins [BR:
oda00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120875645 (ACAN)
Lectins [BR:
oda04091
]
C-Type lectins
Lecticans
120875645 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_CA
I-set
ig
Ig_3
EGF_3
EGF_TEN
DUF166
Motif
Other DBs
NCBI-GeneID:
120875645
NCBI-ProteinID:
XP_040113516
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
MTTLLLVFVTLRVIAAAISVEVSEPDNSLSVSIPEPSPLRVLLGSSLTIPCYFIDPMHPV
TTAPSTAPLAPRIKWSRITKEKEVVLLVATEGRVRVNSAYQDKVTLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMHGIEDSQATLEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQGGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPED
FFGVGGEEDITIQTVTWPDVELPLPRNITEGEARGNVILTAKPDFEVSPTAPEPEEPFTF
VPEVTATAFPTEENRTGEATRPWAFPRESTPGVGAPTAFTSEDLVVQVTLAPGATEIPGQ
PRLPGGVVFHYRPGSSRYSLTFEEAKEACLRTGAIIASPEQLQAAYEAGYEQCDAGWLQD
QTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSSETYDVYCYVDRLEGEVFFATRLEQFTF
REAQEFCESQNATLATTGQLYAAWSRGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVR
TVYLYPNQTGLLDPLSRHHAFCFRGVSAAPSPGEEEGSTPTAGPDVEDWIVTQVGPGVAA
VPVGEETTAIPGFTVEPENKTEWELAYTPAGTFPLPGIPPTWPPTEEATEEHTEGPSATE
VPSASEKPFPSEEPFLPEEPFPSEKPFPPEELFPSEKPFPSEKPFPSEKPFPSEEPFPSE
KPFPPEELFPSEKPIPSEEPFPSXXXXPSEKPIPSEEPFPSEEPSTLSAPVPSRTELPTS
GEASGVPEVSGDFTGSGEISGHLDFSGLPSGESASGLPSEDLDSSGLTSTVSSGLPVESG
LPSGEEERITWTSAPKVDRLPSGGEGPEVSASGVEDISGLPSGGEVHLEISASGVEDISG
LPSGGEVHLEISASGVEDISGLPSGGEVHLEISASGVEDLSRLPSGEGPEISASGVEDLS
GLPSGEGHLEISASGVEDLSGIPSGEGPEVSASGVEDLSRLPSGEGPEVSASGVEDLSRL
PSGEGPEVSASGVEDLGGLPSGEGPEVSASGVEDLSRLPSGESPEVSASGVEDLGGLPSG
EGPEISASGVEDLSRLPSGEGPEISASGVEDLSKLPSGEGPEVSASGVEDLSRLPSGEGP
EVSASGVEDLGVLPSGEGHLEISASGXXXSGVEDLSRLPSGGEDHLETSASGVGDLSGLP
SGREGLEISASGAGDLSGLTSGKEDLTGSASGALDLGRIPSVTLGSGQAPEASGLPSGFS
GEYSGVDLGSGPSSGLPDFSGLPSGFPTVSLVDTTLVEVVTATTAGELEGRGTIDISGAG
ETSGLPFSELDISGGASGLSSGAELSGQASGSPDISGETSGLFGVSGQPSGFPDISGETS
GLLEVSGQPSGFSGEISGVTELSGLPSGQPEISGEASGILSGLGPPFGITDLSGEAPGIP
DLSGQPSGLPEFSGTTSGIPDLVSSAVSGSGESSGITFVDTSLVEVTPTTFKEEEGLGSV
ELSGLPSGEVGLSGTSGLVDVSGLSSGAIDSSGFTSQPPEFSGLPSRVTEVSGEASGAES
GSSLPSGAYDSSGLPSGFPTVSFVDRTLVESVTQAPTAQEAGEGPSGILELSGTPSGAPD
MSGDHLGSLDQSGLQSGLVEPRGEPASTPYFSGDFSGTTDVSGESSAVTSTSGEASGLPE
VTLITSELVEGVTEPTVSQELGQRPPVTYTPQLFESSGEVSASGDVPRFPGSGVEASSVP
ESSGETAYPEAEVGASAAPEASGEASGSPNLSETTSTFHEADLEGISGLGASGSPSAFPE
GPTEGLATPEVSGESTTAFDVSVEASGSPSAPPLASGDRTDTSRDLSGHTSGLDIVISTT
IPESEWTQQTQRPAEARLEIESSSPVHSGEESQTADTATSPTDASIPTSAGGTDDSEATT
TDIDECLSSPCLNGATCVDAIDSFTCLCLPSYQGDICEIDQKLCEEGWTKFQGHCYRHFP
DRATWVDAESQCRKQQSHLSSIVTPEEQEFVNNNAQDYQWIGLNDKTIEGDFRWSDGHSL
QFENWRPNQPDNFFATGEDCVVMIWHEKGEWNDVPCNYQLPFTCKKGTVACGEPPVVEHA
RIFGQKKDRYEINALVRYQCTEGFIQRHVPTIRCQPSGHWEEPRITCTDPATYKRRLQKR
SSRPLRRSRPSTAH
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcttggtgtttgtgactctgagggtcatcgcagcagccatctcagta
gaagtttcagaacctgacaactcgctgagtgtcagcatccctgaaccgtccccgctgcgg
gtcctcctggggagctccctcaccatcccctgctacttcatcgaccccatgcaccccgtg
accaccgccccctccactgcccccctcgccccgagaatcaagtggagccgcataaccaag
gagaaggaggtggtgctgctggtggccacggaagggcgggtgcgggtcaacagcgcctac
caagacaaggtcacgctgcccaactaccccgccatccccagcgatgccaccctggaaatc
cagaacctgcgctccaatgactccgggatctatcgctgtgaggtgatgcacggcatcgag
gacagccaggccaccctggaggtcgtggtgaaaggcatcgtgttccattacagagccatc
tccacacgctacaccctggactttgacagggcgcagcgggcctgcctgcagaacagcgcc
atcatcgccacgcccgagcagctgcaggccgcctatgaggatggcttccaccagtgcgac
gccggctggctggccgatcagactgtgaggtaccccatccacacgccgagggaaggttgc
tatggagacaaggacgagtttccaggcgtgagaacctacggcatccgggacaccaacgaa
acctatgacgtgtactgcttcgcggaggagatggagggcgaggtcttctatgcaacatcc
ccggagaagttcaccttccaggaggcagccaacgagtgccggcggctgggcgccaggctg
gccaccacgggccaactctacctggcctggcagggtggcatggacatgtgcagcgccggc
tggctggctgaccgcagcgtgagataccccatctccaaggcccgaccgaactgcgggggc
aacctcctgggagtaaggaccgtctacctgcatgccaaccagacgggctaccctgaccct
tcatcccgctatgacgccatctgctacacaggtgaagactttgtggacatcccagaagac
tttttcggggtaggtggtgaggaggacatcaccatccagacggtgacctggcctgatgtg
gagctgcccctgccccgaaatatcaccgagggtgaagcccgaggcaacgtgatcctcacg
gcaaagcccgactttgaagtctccccaaccgccccagaacccgaggagcctttcacattt
gtccccgaagtaacggccactgcattccccacggaggagaacaggactggagaggccacc
cggccctgggcctttcccagagagtccacgcccggcgtgggagcccccacggccttcacc
agcgaggacctcgttgtgcaggtgaccttagccccaggtgcaaccgagatccctgggcag
ccacgactgccagggggagtcgtgttccactaccgcccgggctcctcccgctactcgttg
acctttgaggaggccaaggaggcctgcctgcgcacgggggccatcatcgcctcgcccgag
cagctccaggctgcctatgaagcaggctacgagcagtgtgacgccggctggctgcaggac
cagacagtcagataccccattgtgagtccgcggaccccctgtgtgggtgacaaggacagc
agcccgggggtccggacctacggcgtgcggccatcatcagaaacctacgatgtctactgc
tatgtggacagactcgagggggaggtgttctttgccacacgcctggagcagttcaccttc
cgggaagcccaggagttctgtgaatcccaaaacgccacgctggccaccacgggccagctc
tacgctgcctggagccgcggtctggacaagtgctacgccggctggctggctgacggcagc
ctccgctaccccatcgtcaccccaaggcccgcctgtggcggggacaaaccaggcgtgaga
accgtctacctctaccccaaccagacaggcctcctggatccgctgtcccggcaccacgcc
ttctgcttccgaggtgtttcagcggcgccctctccaggagaagaggagggtagcacaccc
acagcaggccctgacgtagaggactggatcgtgacccaagtggggcctggcgtggctgct
gtccctgtcggggaggagacgactgcaatcccaggcttcaccgttgagccagaaaacaag
acggaatgggaacttgcctacaccccagcgggcaccttcccactaccagggatccctcct
acatggcctcccactgaagaagcaacagaggagcacacagaaggcccttctgcaacggaa
gtgccctcagcctcagagaagccgttcccctcagaggaaccattcctcccagaggaacca
ttcccctcagagaaaccattccccccagaggaactgttcccctcagagaagccgttcccc
tcagaaaagccattcccctcagaaaagccgttcccctcagaggaacctttcccctcagaa
aaaccatttcccccagaggaactgttcccctcagagaaaccaatcccctcagaggagcct
ttcccctcagannnnnnnnnnccctcagagaaaccaatcccctcagaggagcctttcccc
tcagaggagccatccacactttcagccccagtgcccagcaggactgagctgccaacctct
ggggaggcatctggggtgcccgaagtcagtggtgacttcacaggcagtggagaaatttca
ggacacctagacttcagtgggctgccctcaggggaaagtgcaagtggactgccctctgaa
gaccttgactccagtgggctcacctctacagtgagctcaggcctgcctgtggaaagtgga
ctgccttcaggggaagaagagagaattacctggaccagtgctcctaaagttgacaggttg
ccctctgggggtgagggcccagaagtttctgcttctggagtagaggacatcagtggactt
ccttctggaggagaggttcatctagagatctctgcctctggagtagaggacatcagtgga
cttccttctggaggggaggttcatctagagatctctgcctctggagtagaggacatcagt
ggacttccttctggaggagaggttcatttagagatctctgcctctggagtagaggaccta
agtagacttccttctggagaaggtccagaaatctctgcctctggagtagaggacctcagt
ggacttccttctggagaaggtcatctagagatctctgcctctggagtagaagacctgagt
ggaattccttctggagaaggtccagaagtctctgcttctggagtagaggacctaagtaga
cttccttctggagaaggtccagaagtctctgcctctggagtagaggacctcagcagactt
ccttctggagaaggtccagaagtctctgcttctggagtagaggaccttggtggacttcct
tctggagaaggtccagaagtctctgcttctggagtagaagatctcagcagacttccttct
ggagaaagtccagaagtctctgcctctggagtagaggaccttggtggacttccttctgga
gaaggtccagaaatctctgcctctggagtagaggacctcagtagacttccttctggagaa
ggtccagaaatctctgcctctggagtagaggatctcagcaaacttccttctggagaaggt
ccagaagtctctgcctctggagtagaggacctcagtagacttccttctggagaaggtcca
gaagtctctgcctctggagtagaggacctcggtgttcttccttctggagaaggtcatcta
gagatctctgcctctggannnnnnnnntctggagtagaggacctcagtagacttccttct
ggaggagaggatcatctagagacttctgcttctggagtaggggaccttagtggacttcct
tctggaagggaaggtctagagatctctgcttctggagctggggatcttagtgggttgact
tctggaaaagaagacttgactggatcagcttctggagccttggaccttggcagaatacct
tctgtaactctaggaagtgggcaagctccagaagcaagtggtcttccttctggatttagt
ggtgaatattctggggtggaccttggaagtggcccatcctctggccttcctgatttcagt
ggacttccatctgggttcccaactgtctctctagtggatactacattggtggaagtcgtc
acagccaccacagcaggtgaactagaaggaaggggaaccattgacatcagcggtgctgga
gaaacatctgggctgcccttcagtgagttggacattagtggaggagcaagcggactctct
tcaggagctgaactcagtggccaagcatctgggtctcctgacatcagtggggaaacctct
ggactctttggtgtcagtggacagccctcagggtttcctgacattagtggggaaacttcc
gggcttcttgaggtcagtgggcagccatcagggttttctggagaaatatctggcgtgact
gagcttagcggactgccctctggacaaccagaaatcagtggagaagcttctggaattctt
tctggccttggtccaccattcggcataaccgatctgagtggagaggcacccgggatccct
gatctcagtgggcaaccatcgggtttgccagagttcagtgggacaacatctgggatccct
gacctggtttccagtgctgtgagtggcagtggtgaatcttctggcattacgttcgtggac
accagtttggttgaagtgaccccaacgacatttaaagaagaagaaggcttaggatctgtg
gaactcagtggcctcccttcaggagaggtgggtctctcaggcacatctgggctagtggat
gtcagtggactgtcttctggagcaattgactccagtgggtttacgtcccagcctccagaa
ttcagtggcctgccaagcagagtaactgaggtcagtggagaagcctccggagctgagagt
gggagcagcctgccctctggagcatatgacagcagtggacttccgtctggtttccccact
gtctcttttgtagacaggactttggtagaatctgtaacccaggctccaactgcccaagaa
gcaggagaagggccttcaggcattctggaacttagcggtactccttctggagcaccagac
atgtctggagaccatttgggatctttggaccaaagtgggcttcagtctggactagtggag
ccccgtggggagcctgcaagtactccatattttagtggggacttttctggcaccactgat
gtaagtggggagtcctctgcagtgacaagcaccagtggagaggcctccggacttccagaa
gttacgttaatcacgtctgagttggtggagggtgttactgaaccaaccgtttcccaggaa
ctgggccagagacccccggtaacatacaccccccaactttttgaatccagtggtgaagtc
tctgcgtctggggatgtgccaaggttccctggatctggggtagaagcatcatcagtccca
gaatccagcggtgagacagcctatcccgaggctgaggtgggagcgtctgctgcccccgag
gcaagcggagaagcttccgggtcccctaacctgagtgaaaccacctccaccttccatgaa
gctgatctggagggaatctcaggcctgggagcaagtggcagcccctcagcctttccagaa
ggccccacagagggcttggctaccccagaagtgagtggagagtcaaccaccgcctttgac
gtgagcgtagaggcgtcaggctcaccttccgcccctcccctggcttctggagacaggact
gacaccagcagagacctgtctggccacacctcagggctggatattgtcatcagcaccacc
atcccagaatccgagtggactcagcagacccagcgccctgcagaggcgcgtctagaaatc
gaatcctcaagccctgtgcactcaggagaagagagccaaacagccgacacagccacctcc
ccaactgatgcttctatcccaacctccgcaggagggacagatgattcagaggcaaccaca
acagacattgacgagtgcctctcaagcccttgtctgaatggagccacctgcgtggacgcc
atcgactctttcacatgcttatgccttcccagctaccaaggggacatatgtgagattgac
cagaagctgtgcgaggagggctggaccaagttccagggccactgttaccgccacttcccc
gaccgggcaacctgggtggacgccgagagccagtgccggaagcagcagtcacacctgagc
agcattgtcacccctgaggagcaggagtttgtcaacaacaatgcccaggactaccagtgg
atcggcctaaatgacaagaccatcgaaggggacttccggtggtcagatggacactccttg
caatttgagaactggcgccccaaccagcctgacaacttctttgccactggggaggactgc
gtagtgatgatctggcatgagaagggcgagtggaacgatgtcccatgcaattaccagctg
cccttcacctgtaaaaagggcacagtggcctgtggagagccccctgtggtggagcatgcc
agaatcttcggacagaagaaggaccgatacgagatcaacgccctggtgcggtaccagtgc
accgagggcttcatccagcgccacgtgcccaccatccgctgccagcccagcgggcactgg
gaggagcctcggatcacctgcacagaccccgccacctacaagcgcagactacagaagcgg
agctcacggcccctgaggaggagccgccccagcacggcccactga
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integrated database retrieval system
