Oryx dammah (scimitar-horned oryx): 120876214
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Entry
120876214 CDS
T07255
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120876214 (RBBP6)
Enzymes [BR:
oda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120876214 (RBBP6)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
U-box type E3
120876214 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
120876214
NCBI-ProteinID:
XP_040113861
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSTHSASSMSSLTSNQSSLAPPVPGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPANLSAPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSR
SHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSP
NKRNVPQGETEREYFNRFREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKY
YKGYATGAQPRPSANRENFSPERFLPLNLRNSPFTRGRREDYSGGQSHRSRNVAGNYPEK
LSSRDSHNQKDNTKSKDKEGESAPGDGKGNKHKKHRKRRKGEESEGFLNPELLDTSRKSR
EPTSGEESKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKR
KNDGSSVSKKETVVKPAKGPQEKLDGEREKSPRSEPPPKKAKEETPKTDNVKASSSSQKD
EKTVGTPRKAHSRPVKEHQEAKPVKEEKAKKDYSKDSKPEKGASKEEKARKPNEKSKPLD
SKGEKRKRKTEEKGVDKEFESSSMKISKLEVTEIVKPSPKRKMELDIEKMDRTPEKDKIS
SSAAPAKKIKLNRETGKKIGSTENVCNTKEPSEKLESTSGKVKQEKIKGKVRRKVTGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKSTSQPISSVGKPASVIKNVSTKPPNAIKYTEKESESSEKIQKLTKE
VSHEIAQHEVKSSKNSASSEKGKTKDRDHSVLEKENPEKRKNNSTQPEKDSNLDRLNEQG
NFKSLSQSSKETRTSGKEDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELT
RRKDSPPRSKDSASGQKTKPREERDLPKKGTGDSRKSSSSPTRDKKPHDHKATYDPKRLS
EETKSLDKNPCKDREKHMLEAKNNKESSGNKSLSILNPPDPQIEKEQVTGQIDKNTIKPK
PQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETAGKVSKELKDKVVEKAKE
SLDTAAVSQAGVTRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEK
KKHKKHKKHKKHKKHAGTEAELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcttctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcacgaacgcacagacgaaagaagaatatactgatgat
aatgctctaattcctaaaaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctttaggtccaccacctccatcttacact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaagtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatacgccata
ccaactatagatgcagaagcatatgcaattgggaagaaagaaaaaccaccttttttacca
gaggaaccatcatcatcttcagaagaagatgatcctatcccagatgagttgttgtgtctc
atctgcaaagatattatgactgatgctgttgtcattccctgctgtggaaacagttactgt
gatgaatgtataaggacagcactcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgacgtctctcctgacgcgttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttacccccaccccct
cccccaataccacctccaagaccactcatccagcggaacctacaacctctgatgagatct
ccaatatcaagacagcaagatcctctgatgattccagtgacatcttcatcaactcactcg
gcttcatctatgtcttcattaacctccaatcagtcgtctttggcccctcctgtccctgga
aatccatcttctgccccagcccctgtacctgatataactgcaacagtctccatatcagtc
cactcagaaaaatcagatggaccttttcgggattctgataataaaatactgccagctgca
gcacttgcatcagaacattcaaagggagcttcttcaattgcaattactgctcttatggaa
gagaagggttaccaggtgcctgtacttggaaccccctctttgcttggacagtcattattg
catggacaattgatccccacgactggtccagtaagaataaatgctgctcgtccaggtggt
ggtcgaccaggttgggaacattccaacaaacttggatacttggtttctccaccacagcaa
attagaagaggagagagaagctgctacagaagtataaaccgtggacggcatcacagcgaa
agatcacagagaactcaaggcccgtcactgccagcaactccagtttttgtgcctgtccca
ccccctcccttgtatcctcctcctccccacacacttcctctcccaggtgttcctcctcca
cagttctctcctcagtttcctcctggccagccaccacctgctgggtatagtgttccccct
ccaggatttcctccagctccagccaatttatcagcaccttgggtgtcatctggagtacag
actgctcattctaataccatcccaacaacacaagcaccacctttgtccagggaagaattc
tatagagagcaacgacgactaaaagaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtccaagtctccctatagtggttcatcctattcaagaagttcgtatact
tattctaaatcaagatctggttcaacgcggtcacgttcttattctcgatcatttagccgc
tcacattctcgttcctattcacgatcacctccataccccagaagaggcagaggaaagagt
cgaaattaccgttcacggtctagatcgcacgggtatcatcgatctaggtcaaggtcacct
ccatatagacggtatcattcacgatcaagatctcctcaagcatttaggggacagtctcct
aataaacgtaatgtaccccaaggagaaacagagcgtgaatattttaacagattcagagaa
gttccaccaccttatgacatgaaagcttattacgggaggagtgttgactttagagaccca
tttgagaaagaacgatatcgagaatgggagagaaaatatcgagagtggtatgaaaaatat
tacaaaggctatgctactggagcacagcctagaccatcagcaaatagagagaacttttct
ccagaaagattcttaccgcttaaccttaggaattctcccttcacaagaggccgcagagag
gattactctggtgggcagagtcatagaagtcgaaacgtagctggcaactatccagaaaaa
ctttcatcaagagacagtcacaatcagaaggataatacaaagtcaaaagacaaggaaggt
gaaagtgctccaggagatggtaaaggaaataaacataagaaacatcgaaaaagaagaaag
ggagaagaaagtgaaggctttctaaacccagagttactagacacttctaggaaatcaaga
gagcctacaagtggtgaggaaagtaaaacagactccttgtttgttctcccaagtagagat
gatgctacacctgttagagacgaaccaatggatgccgaatccattacttttaaatcagtg
tctgaaaaagacaagagagaaaaagataaacctaaagcaaaaggtgacaagaccaaacgg
aaaaatgatggatcttctgtatccaaaaaagaaactgttgtaaaacctgctaaaggaccc
caagaaaaactagatggagagcgtgaaaaatctcctcgatctgaacctccacctaaaaaa
gccaaagaggagaccccaaagactgacaatgtgaaagcgtcatcttcctctcaaaaagat
gaaaagacggtcggcacccccagaaaggctcactcaaggccagtaaaggagcaccaggag
gcaaagccagtcaaagaggaaaaagcaaagaaggactattccaaagacagcaagccagag
aagggggctagtaaggaagagaaggccaggaagcctaatgagaaaagcaagccgcttgat
agcaagggagaaaaaaggaagagaaaaactgaagaaaaaggcgtagataaagagtttgag
tcatcttcaatgaaaatctctaaattagaagtaactgaaatagtgaaaccatcacccaag
cgcaaaatggagcttgatattgaaaagatggataggacacctgaaaaagacaaaatttca
tcatcagctgctccggccaaaaaaatcaagcttaacagagaaactggtaaaaaaattgga
agtacagaaaatgtatgtaacacaaaagaaccctctgaaaagttggaatcaacatccggc
aaagtgaaacaagaaaaaatcaaaggaaaggtcaggcgaaaagtgactggaactgaagga
tccagctcaacacttgtggattataccagtaccagttcgactggaggcagtcctgtgcgg
aaatctgaagaaaaaacagatacaaagcgaactgtcattaaaacaatggaagaatataat
aatgacaacacagctcctgctgaagatgttattattatgatccaggttccccaatccaaa
tgggataaagacgactttgaatctgaagaagaagatgttaaatccacctcacaacctata
tcaagtgtaggaaaacctgccagtgttataaaaaatgttagcactaaaccaccaaatgca
atcaagtatactgaaaaggagagtgaatcatcagagaaaattcagaaactcaccaaggag
gtgagccatgaaattgcacagcatgaggtcaaaagttcaaaaaactctgcgtctagtgaa
aaagggaaaaccaaagatcgagatcactcagtattggaaaaggaaaacccagaaaagaga
aagaacaacagcactcagccagagaaagatagtaatctggaccgtctgaatgagcaagga
aattttaaaagtctgtctcagtcttccaaagagactagaacttctggaaaagaagataag
catgattccattcgagggtcctcaaataaagactttactcccaacagagacaaaaaaaca
gattatgacaacagagagtattcaagttccaaacgtagagatgaaaggaatgaattaaca
agaagaaaagactctcctcctcggagtaaagactctgcatctggacagaaaactaagcca
agggaggagagagatttgcctaaaaaaggaacaggagattccagaaaaagtagttctagt
cccacgagagacaaaaaacctcatgatcataaagccacttatgatcctaaacgcttaagt
gaagagacaaaatctttagataaaaatccctgtaaagatcgtgagaaacacatgttagag
gcaaagaacaataaagagtcaagtggcaataaatcacttagtatacttaacccacctgac
ccacagattgagaaagagcaagttactgggcaaattgataagaacaccatcaagcctaag
ccccagttaagtcattcctctcgactgtcctctgacttaactagagaaactgatgaagct
gcttttgaaccagactataatgaaagtgacagtgaaagcaatgtgtctgtaaaagaggaa
gaaactgcaggaaaggtttctaaggaactgaaagataaagtagtagagaaagcaaaggag
agcctggacacggcagcagtcagccaggcaggcgtcaccaggagccagagtcagagcagc
ccaagtgtcagtccaagcagaagtcacagcccttctggaagccaaacccggagccacagc
agcagtgccagctctgcagaaagtcaggacagcaagaagaagaagaaaaagaaggaaaag
aaaaagcacaagaaacataaaaagcataagaagcataagaagcatgcaggcactgaagca
gaattggaaaaaagccaaaaacacaaacataagaaaaagaagtcgaagaagagcaaagat
aaagaaaaggagaaggagaaggatgaccaaaaagtgaaatctgtcactgtgtag
DBGET
integrated database retrieval system
