Oryx dammah (scimitar-horned oryx): 120876940
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Entry
120876940 CDS
T07255
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04136
Autophagy - other
oda04140
Autophagy - animal
oda04211
Longevity regulating pathway
oda05010
Alzheimer disease
oda05014
Amyotrophic lateral sclerosis
oda05016
Huntington disease
oda05017
Spinocerebellar ataxia
oda05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120876940 (ATG13)
04136 Autophagy - other
120876940 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
120876940 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
120876940 (ATG13)
05014 Amyotrophic lateral sclerosis
120876940 (ATG13)
05016 Huntington disease
120876940 (ATG13)
05017 Spinocerebellar ataxia
120876940 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
120876940 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120876940 (ATG13)
03029 Mitochondrial biogenesis [BR:
oda03029
]
120876940 (ATG13)
Membrane trafficking [BR:
oda04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120876940 (ATG13)
Atg1 complex
120876940 (ATG13)
Mitochondrial biogenesis [BR:
oda03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120876940 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120876940
NCBI-ProteinID:
XP_040115067
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTTGEDTGV
TCPSVEDSQEVCATSFSTSPPSQCVLTATKALSQTPAPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLGPNQPAHGAQADQER
LATYTPSDGAHCAATPSSSEDAETVSNGSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLQGSLHSDGSSGGSSGHTQDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSLDIGAQSMAEDLDSLPEKLAAHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgatcgtccaggctcgactgggagagaagatttgtactcgt
tcatcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gtcacacatgaagcaaagaaggccctggcagggcagctgcctgctgttgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctggaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgctgtgtacaacaga
ttgtcattgctgctgaagtctctgcttgctataactagggtgacaccagcttacagactc
tccagaaagcaagggcatgaatatgtcatcttatacagaatatattttggggacgttcag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggcacccctgtg
ggcaccatcaccctttcctgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcatcattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaaccaccggcgaggacactggagta
acgtgtccttctgtggaagattctcaagaagtgtgtgccacctccttttccacctcgcct
ccctcccagtgtgtgcttacggccacaaaggcactttctcagacccctgctcctgtggtg
acggacactctgagggtccccacggcaggactggccttttcccaccaactctccagctct
cgcctttcctatcagcctgctgccctgggcgttggatccgctgacctggcttatccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctaatggtccccgggaaggaa
ggtggggtacctcttggtcccaaccagcctgcccatggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgtgccgccacgccgtccagcagtgag
gacgctgaaactgtatcaaacggcagcgagggacgggcctccccccacgatgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaacctggagctggaggatgcg
gaccccatggtgaatccaccagattccccagagactacgtctcctctccagggcagcctg
cactctgacggctccagcgggggcagcagcggccatacccaggacgacttcgtcatgatc
gacttcaaaccagctttttctaaagatgacatccttccgatggacttggggaccttctat
cgtgaatttcagaacccgcctcagctgagcagcctctcccttgacatcggggcccagtcc
atggccgaggacttggactcactcccagagaagctggctgcgcacgagaagaatgtccga
gaatttgatgcctttgtagaaacgctgcagtaa
DBGET
integrated database retrieval system
