Oryx dammah (scimitar-horned oryx): 120877615
Help
Entry
120877615 CDS
T07255
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120877615 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120877615 (CNOT4)
03019 Messenger RNA biogenesis [BR:
oda03019
]
120877615 (CNOT4)
04121 Ubiquitin system [BR:
oda04121
]
120877615 (CNOT4)
Enzymes [BR:
oda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120877615 (CNOT4)
Transcription factors [BR:
oda03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
120877615 (CNOT4)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120877615 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120877615 (CNOT4)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120877615 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Rtf2
DZR_2
Nup35_RRM_2
zf-C3HC4
Torus
Motif
Other DBs
NCBI-GeneID:
120877615
NCBI-ProteinID:
XP_040115876
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAPTNANSLNSTFSVLPQRFPQFQ
QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
IADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPASNTATTDSPSW
DHPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPTAAPSQTHHSAPF
STQIPLHRASWNPYPPPSNPSSFHSPPPGFPTAFRPPSKTPTDLLQSSALDRH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgacgcaaaggaagaccctgtggaatgtcctctttgcatggagccc
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgcttt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaactgcaaaggataaagaat
gagaaaaaacagaaacaaaatgagagaaaacagaaaatatcagaaaatcgcaaacatttg
gccagtgtacgtgttgtacaaaaaaacctcgtctttgttgtaggtctgtctcagcgtcta
gcagacccagaggttttaaaacggccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtaacctatatacggtcggaagacgctctcagagctatacagtgtgttaacaatgtggtg
gtggatggcaggacacttaaggcatctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaagcctgactgcatgtacctacatgaattgggagatgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagaatatgaacagaagctc
cttcaggaattatataaattaaaccccaatttccttcaactgtctacgggttcagttgat
aagaataagaacaaagtgacaccactgcagaggtatgatacccctattgacaaaccttct
gattctctcagcatagggaatggtgataattctcagcagatatctaacagtgatacacct
tcaccacctcctggtttatcaaaatccaatccagtcatccccatcagttcatccaatcac
agtgcacggtctccttttgaaggagcagtaactgagtcacagtcgttattctcagataat
tttcgccatcccaaccctatcccaagtgggcttcctcctttccccagctccccacagact
tccagtgactggcctacagcaccagagccacagagcctcttcacatcagaaacaatccca
gtatcatcctctacagactggcaagcagcgtttggctttggttcttctaaacaaccagag
gatgacttgggttttgatccctttgatgtcactcgaaaagccttagcagacttgattgaa
aaggaactgtcagtccaagaccagccttccctttcgcccacatctctccagaactcctcg
tcacacactacaaccgccaaaggtccaggctctggattcctgcatcctgctgcacctaca
aatgccaactctctgaatagtaccttttccgtcttgccacagaggttccctcaatttcag
cagcaccgagcggtttataattcattcagttttccaggccaggcagcccgctatccttgg
atggcctttccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaat
agtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggatccct
atagcagacaacagcagttctgtagagagtttaaatatgaaggaatggcaggacgggcta
agggcacttctacccaacattaacatcaactttggtggactgcccaattcttcctccccc
tccaacgccaaccacagtgcaccagcgtccaacactgccaccaccgacagcccgagttgg
gaccaccctggcagctggacagacccagccatcatcacaggtattccagcatcttcagga
aacagtttagactctcttcaagatgacaatcctccacactggctaaaatcccttcaggcc
ctcacagagatggacggccccactgctgctccgtcacagacccaccacagcgcccccttc
agcacacagatccctctgcacagagccagttggaatccctaccctcctccttcaaaccct
tccagctttcactccccacccccaggctttccgacagccttcagaccccccagcaaaacc
cccacagatttattacagagttcagcactggaccgccactag
DBGET
integrated database retrieval system
