Oryx dammah (scimitar-horned oryx): 120877867
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Entry
120877867 CDS
T07255
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120877867 (VPS50)
Membrane trafficking [BR:
oda04131
]
Protein recycling
Others
EARP complex
120877867 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
120877867
NCBI-ProteinID:
XP_040116226
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDTTSASEG
SNMMGAEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSSATSSKTVTFFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADSAATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccggcagggtctgaaaagtcccccagagagcctc
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacaacctagtgaccctcaagctgaacaagaactaattaatagcattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactggagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaactgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgaa
agagttacttcattacaaacaggtcttcagttagccgctgttatctgcaccaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaacgataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgccagtacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaattgaggaacagttggatgttgct
ctgtccaaaatatgcaagaattttgacattaaccactacaccaaagttcaacaagcttat
cgacttcttggaaaaacacagaccgcaatggatcaacttcatatgcacttcacccaagcc
attcataacaccgtgtttcaagttgttcttggctatgtggaactgtgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcacgacagtgaggatactacttctgcttctgaaggg
agtaatatgatgggtgctgaagagacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaattattttaagaactaccatagaacaaggcttgatgaactg
agaatgtttctagagaatgagacctgggaactttgtcctgtgaagtcaaatttcagcatc
ttgcagcttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacccagt
aagcagtcatctgcaacttcctcaaaaacagtaaccttttttgagcagtactgcagtggt
gggaatccatttgaaattcaggccgaccacaaagatgaagaaacagaagatgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggaatatgacagtgac
agcgatgttcctgaggaactaaaacgagactttgttgatgagcagacaggtgatgctcct
gtgaaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagactacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcatttgatgttatccattttatgtct
cagctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactaggtcttagtagtagtagactaagaacaactctaaacaggatacaa
gaaagcctcattgatctggaggtttcggctgattctgctgccacgctcacagcagcagaa
gaaaggaaggagaaggtgcccagtcctcacctgagtcacctagtggtattgacctctggg
gacacactgtatgggttggcggaaagagtggtcgccacagaatccttggtattcttggct
gagcagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaaacca
tttcttcagcagttttattctcagacggtctcaacggccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctgctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacactgtta
aaggaatttgagcagtttaacatgcggttaaatgaagtttctaagagagttcggataccc
ttgcccgtgtctaatatactttgggaacattgtatacgcctggctaatcgaactattgtg
gaaggatacgccaacgtcaagaagtgtagcaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaactgatatcagacccattccggataaa
gaatttgtggaaacctatattaaagcgtactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggagtattcaacgaagcagctgaccaacctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaaggcaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
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