Oryx dammah (scimitar-horned oryx): 120878061
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Entry
120878061 CDS
T07255
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oda03016
]
120878061
Enzymes [BR:
oda01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
120878061
Transfer RNA biogenesis [BR:
oda03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120878061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
120878061
NCBI-ProteinID:
XP_040116571
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MDPALATWDFSSPLISLWINRFYIYLGFAFGFSLWICFQIVIRKQNKNSQEKTVPKASQD
LMTNGYIFRPKKEVFVSGVKIFYGSQTGTAKGFATLLAEALSSLDLPVAMINLKDYDPDD
CLVEEVTSKNVCAFLVATYTDGQPPESAEWFCKWLEEAANDFRFGKTYLKGMRYAVFGLG
NSVYMSHFNKVGKNVDKWLWMLGAHRVMTRGEGDGNVVKSKHGSIEADFTAWKAKFISRL
QALRKGERKRCRGNCKKGKCESNQHGSEAAEPGSHAQEEFHHGDAEEEEPFGSTSEEESD
TEDHQSQNSVIDVEDLGKIMDHVKKEKREKEPQEGEMSVIRSTVKSEASERRAMITPALR
EALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCV
FCWRHHTNPVGTEWRWQMDQPEMILKEAIENHQNMIKQFKGVPGVKEERFEEGMTVKHCA
LSLVGEPIMYPEINKFLKLLHECKISSFLVTNAQFPAEIRDLKPVTQLYVSVDASTKDSL
KKIDRPLFKDFWQRFLDSLKALAAKQQRTVYRLTLVKAWNVDELQAYAELVSLGNPDFIE
VKGVTYCGESSASSLTMANVPWHEEVVRFVCELVDLIPDYEVACEHEHSNCLLIAHKKFK
IGREWWTWIDYSRFQELIREYEDSGGSKTFSAKDYMAKTPHWALFGANERGFDPKDTRYQ
RKNKSKDISGC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgctttggctacctgggacttctcctcacctttaatatcattatggataaac
aggttttacatatacttgggctttgcctttggttttagcctttggatttgtttccagatt
gtcatcaggaagcagaacaagaactcacaggagaaaaccgttccaaaagcatctcaggat
ttgatgacgaatggctatatctttcgtccaaagaaggaagtctttgtatctggagtgaag
atattttatggttctcagactggcacagcaaagggatttgcgacacttctggccgaagca
cttagctccctcgatctgcctgtggcaatgattaatctgaaggactatgacccagatgac
tgtcttgtagaagaggttactagtaaaaacgtttgtgccttcctggttgccacctacact
gacggtcaaccgcctgagagtgctgagtggttctgcaagtggctggaggaagcagccaac
gactttcgatttggcaaaacgtacctgaaggggatgagatacgcggtgtttggcctggga
aattctgtgtacatgagccacttcaacaaggtggggaagaacgtggacaagtggctctgg
atgcttggtgctcatcgcgtaatgacccgaggggagggcgacggcaacgtggtgaaaagc
aaacacggcagcattgaggctgacttcacagcttggaaggccaagttcatctcccggctg
caggcactccgcaaaggagagagaaagcgctgcaggggcaattgcaagaaaggcaagtgc
gagtctaaccagcatggctcagaagcggcggagccagggtcccacgcacaggaggaattt
catcacggagacgcagaggaggaagagccctttgggagcaccagtgaggaagagtctgat
actgaggaccatcagagtcaaaattctgtcattgatgtggaagacctcggcaagattatg
gatcatgtgaagaaagaaaagagagaaaaggagccacaggaaggggaaatgagtgtgatc
aggagcacagtgaagagtgaagccagtgaaagaagagctatgattacccctgctctccga
gaagctcttactaaacaaggttatcagttgattgggagccactctggggtgaagctttgc
agatggacaaagtccatgctccgagggagaggaggttgctataaacatacattctatggc
attgaaagccatcgttgcatggaaactaccccgagcttggcatgtgcaaataaatgtgtc
ttctgttggcggcaccacaccaatccagtgggtactgagtggcggtggcagatggaccag
cctgaaatgatcttgaaggaagccattgaaaaccatcagaacatgatcaagcagtttaaa
ggagtgccaggcgtcaaagaagaacgctttgaagaaggaatgacagtaaagcactgtgcg
ttgtctctcgtgggagaacccatcatgtaccctgaaatcaacaagtttttgaagctcctt
catgagtgtaaaatctccagtttcctggtcacaaatgcacagttccctgcggaaatcagg
gacctcaaaccagttacccagctctacgtcagtgtggatgctagcaccaaagacagcctg
aagaaaattgaccgcccgctcttcaaggatttctggcaaagattcctcgatagtttaaaa
gccttggctgcaaagcaacaacgtactgtctacagactgactctagtgaaggcatggaac
gtggatgagctccaggcctatgccgagctggtgtccctggggaatcctgacttcatcgag
gtgaagggtgttacctactgtggagagagttcggcgagcagtcttaccatggccaacgtg
ccctggcacgaggaggtggtgcgctttgtctgtgagttggtggatctgatccccgactat
gaagtcgcttgtgaacacgagcattccaactgtcttctcatagctcacaagaagtttaag
attggcagagaatggtggacgtggatcgattacagccgcttccaggagctcattcgggaa
tatgaagatagtggcggatcaaaaactttcagtgcaaaggattatatggccaaaacgcct
cattgggccttatttggtgccaacgaaagaggctttgatcccaaggataccagatatcag
agaaagaacaaatcaaaggatatttctggatgttga
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