Oryx dammah (scimitar-horned oryx): 120878564
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Entry
120878564 CDS
T07255
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120878564
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120878564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
TRIM_CC
Sina_RING
Trm112p
zf-RING_4
Retinal
zf-Nse
Ninein_long_CC
SSNA1
Motif
Other DBs
NCBI-GeneID:
120878564
NCBI-ProteinID:
XP_040117133
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MAWRVSVPELEGRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLAPELRCPECRQEV
DCSSSPPNVSLAKVIEALQLPGDPEPQLCAHHRNPLSLFCEKDQELICGLCGLLGAHQHH
RVTPVPTVYSRMKEELAALISDLKQEQKKVDEQVAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGVEGHTRGLVASLDMQLEQARGARERLVQAAGVLEQFGSESHHEF
IRKYHAMASRPELQQARLSEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLSKSPEHGVWLIGLKEGRVYEAFSCPRVPLPVVGHPHRIGIYLHY
EQGELTFFDADRPDDLRPLYSFQADFQGKLYPILDVCWHDRGSNSLPMVLPPPGGPGLLS
PLQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcgggtgagcgtgcccgagctggagggccgcctgcagtgccccgtgtgcctg
gaggtcttcaaggagcccctgatgctgcagtgcggtcactcctactgcaagggctgcctg
ctgtccctgtcccgccacctggcccccgagctgcgctgccccgagtgccggcaggaggtg
gactgcagcagctccccacccaacgtctccctggcgaaggtgatcgaagccctgcagctc
ccaggggacccggagccccagctgtgcgcgcaccaccggaacccgctcagcctcttctgc
gagaaggaccaggaactcatctgcggcctctgcggcctgctgggcgcccaccagcaccac
cgggtcacgcccgtccccaccgtctacagccgcatgaaggaggagctagcagccctcatc
tccgacctgaagcaggagcagaagaaggtagatgagcaagtcgccaaactggtgaacaac
aggactcggattgtgaacgagtccgatgtcttcagctgggtgatccgccgtgagttccag
gagctccaccacctggtggacgaggagaaggcccgctgcctggagggggtggagggccac
acccgtggcctcgtggcctccctggacatgcagctggagcaggcccggggcgcccgggag
cggctggtccaggccgcgggtgtgctggagcagttcggcagcgagagtcaccacgagttc
atccggaagtaccacgccatggcctccagaccagagctccagcaggcccgactctcggaa
ggtgccttcagccctatctccttcaagccaggcctgcaccaggctgacatcaagctgacg
gtgtggaaaaggcttttccgaaaggttctgccagccccggagtccctcaagctggatccg
gccacggcccacccgctcctggagctctccaagggcaacaccgtggtgcagtgtgggctc
ctggcccagcggcgcgcgagccagcccgagcgcttcgattacagcacatgtgtcctggcc
agcaggggcttctcctgcggccgccactactgggaggtggtggtgggcagcaagagcgac
tggcgcctaggggtcatcaagggcacagccagccgcaagggcaagctgagcaagtccccg
gagcacggcgtgtggctcatcggcctgaaggagggccgagtgtatgaggccttcagctgc
ccccgggtacccctgcccgtggtgggccacccccaccgcatcggcatctacctgcactat
gagcagggggagctcaccttctttgatgccgaccgccccgacgacctgcggccactctac
tcgttccaggccgacttccagggcaagctgtaccccatcctggacgtgtgctggcacgac
aggggcagcaactccctgcccatggtgctgccgccacccggcgggcccggcctcctctcc
ccactgcagcccaccaagctgtag
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