Oryx dammah (scimitar-horned oryx): 120878569
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Entry
120878569 CDS
T07255
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04140
Autophagy - animal
oda04211
Longevity regulating pathway
oda05010
Alzheimer disease
oda05014
Amyotrophic lateral sclerosis
oda05016
Huntington disease
oda05017
Spinocerebellar ataxia
oda05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120878569 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
120878569 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
120878569 (RB1CC1)
05014 Amyotrophic lateral sclerosis
120878569 (RB1CC1)
05016 Huntington disease
120878569 (RB1CC1)
05017 Spinocerebellar ataxia
120878569 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
120878569 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oda01009
]
120878569 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120878569 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
oda03029
]
120878569 (RB1CC1)
Protein phosphatases and associated proteins [BR:
oda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120878569 (RB1CC1)
Membrane trafficking [BR:
oda04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120878569 (RB1CC1)
Mitochondrial biogenesis [BR:
oda03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120878569 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Lant_leader_dom
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120878569
NCBI-ProteinID:
XP_040117147
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRADSLPEREGSEKAETKTSTEL
VLSPDTPAATSKPSLTSFHMSVEHIAPDTADAESGKDVREPCPSPAQQDAAAVEAKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFMAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQSASSPRLESATG
ITTTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEHTLHQASLDL
DSLAESPESDFMSAVNEFVIEEQLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTR
GPGQENLGDRVSLSAQLGRCRASAHDSHLSIQTLKEDFCHFRTFVQKEQCDFANSLQCTA
VEIRSIIDKVKHSLEITLHEKHQKELESLKSEYEDRLTTLVKESEENKSKITKLRGDLAC
LEEVLQNKDNEFALVKHEKEAVICLQKEKDQKLLEMERTVHSQHCEVEALRQSREIALED
LRKLHVENDEKLQLLRAELQHLEQSHLKELEDTLQVRHTQELEKAMSEHRLCLEKLEMEN
QQRIEQIQDSHAAVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKMLLEES
RTQEKKTLQSLFEKETEQLRAEISKLNQKIHDNNENYQVGLAELRTLMTVEKDQCISELI
SRHEEESDRLTTDLNKMTSLYQQAFEIEKGLKEELAELQSKLDSELSALEKQKDEKISQQ
EDMYKAIIQKLEKDKEEFVMRQERDREQLVQRLNCEKEAAIETARKEMHLEREAVEKELL
EKVKHLESQLAKSHTMESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKRLEEEVSRLRGSAFVPSPGVAAAPELYGACAPEPPLEALDTLGEGRPDSAMETSTMSV
QENVHVLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHAESLPALDLRPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaaccaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgcgatccacagcaagtacaagatcgccatt
cagcaccaggtgctggtggtcaacgggggcgagtgcatggctgccgaccgcagggtgtgc
acctacagcgctgggacggacacaaatccaatttttctttttaacaaggaaatgatcttg
tctgagcgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagtcgaagagtcccttatgatgcctgctgtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactctgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaagattgc
tcaaattcctaccaaaagctgcttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaagacatcaaattaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattccgctgttggagtgcctcaccagacacagttacagggaatgtttagggagagcg
gattccttgcctgaacgtgaaggctcagaaaaggctgagacgaagacctccactgaactg
gtgctctctcctgatacgcctgcagcaacgagcaaaccctcgttaacctcatttcacatg
tctgtggagcacatagccccagacaccgcagatgctgaaagtggaaaagatgtgagggag
ccttgtccaagccctgcccagcaggacgcagctgcagtagaggctaaagagggggacctg
cctttctttaatgtttctctgttagactggatcaacgtgcaggacaggcctaatgacgtc
gagtccttggtcaggaagtgctttgattccatgagcaggcttgatccccggatcattcga
ccctttatggcagaatgccgtcagactattgccaatctcgataatcagaacatgaaagcc
atcaagggcctggaggaccggctgtacgccctggaccagatgattgccagctgcggccga
ctggtcaatgagcagaaagaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgctacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaagctgttggacattaaacagaagtgcaccactgccaaa
caggagctcgcaaataaccttcatgtcagactcaagtggtgttgctttgtgatgctccac
gctgatcaggatggagagaagttgcaggctttgctccgcctggttatcgagctcttagaa
agagtcaagatcgtagaagctctgagcacagttcctcagatgtactgcttagctgttgtt
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggccggtgctttagtc
aaggacggaaagcaattatatgaggctgagaagtcaaaaagggaatcctttgggaaatta
tttaggaaatcttttctaagaaatcgtctgttcaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttctgaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctccaccagcatgtactcgctctgcataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagacctgctgagtgaacaaaaggcc
tctgcgagtcagacgtccccgcagtcggcttcctcgccccggctggaaagcgcgacagga
atcacaaccactacctcacccaggacaccgcctccactcgccgtgcaggatcccctgtgt
cctgcggtctgccccttagaggagctgtcaccagacagcattgatgcccacacgtttgac
tttgagactattccccatccgaatatagagcatactctccaccaggcctccttagacttg
gattcactagcagaaagtcctgagtcggactttatgtctgcagtgaatgaatttgtcata
gaggagcagctgtcgtctccaaaccccatcagcgacccgcagagcccggagatgatggtg
gagtccctctactcctctgtcatcaatgccattgacagcaggcggatgcaggacaccagg
ggccccggtcaggagaacctgggcgaccgcgtgtccctcagtgcacagctggggaggtgc
cgcgcatccgcccatgactcgcaccttagcattcagaccctgaaggaggacttctgccac
ttccggacgttcgtgcagaaggaacagtgtgactttgccaattccttgcagtgtacagca
gtagaaataagaagcattatcgacaaagtaaagcactctttggaaataacactacatgaa
aaacatcaaaaagaactagagtctttaaaaagcgagtatgaggacaggctcactaccctg
gtgaaggagagtgaagagaacaagagcaagatcaccaagctgcggggggacctggcgtgc
ctggaggaggtgctgcagaacaaggataacgagttcgctctggtcaagcacgagaaggaa
gccgtcatctgcctgcagaaagagaaggaccagaagctgcttgagatggagcgcacagtg
cacagccagcactgtgaggtggaagcactgcggcagtcgcgcgagattgcgctggaggac
ttgaggaagctccacgtggagaatgacgagaagctccagctactgcgggcagagctccag
cacctggagcagagtcatctgaaggagctggaggacacactgcaggtccgtcacacacag
gagttggagaaggccatgagcgagcacaggctctgcttggagaaactagaaatggaaaac
cagcagaggatcgagcagatccaagattcgcatgccgcagtcatccaggagaaggagcag
cagctccaggagttaaagctcaaggtttcggatttgtcggacatgagatgtaagttagag
gtggagctggccctgaaggaagcagaaactgacgagataaaaatgttgctggaagaaagc
agaacccaggagaagaagaccttgcagtctctcttcgaaaaagagaccgaacagttgaga
gcagaaatcagtaaactaaaccaaaagattcacgacaataatgaaaattatcaggtgggc
ttggcagagctgagaactttaatgacagttgaaaaagatcagtgcatttctgagttaatt
agtagacatgaagaagaatctgataggcttacaactgatttaaacaaaatgacatcattg
tatcagcaagcatttgaaatagaaaaaggcctgaaagaagaattagctgaactgcagagt
aaattggactcagaattgagtgctcttgaaaaacaaaaagatgagaaaatctcccagcaa
gaggatatgtacaaagctattatccagaagctagagaaagacaaagaggaatttgtcatg
agacaggaacgggaccgagaacagctagttcagaggcttaattgtgaaaaagaagctgct
attgagactgccagaaaagaaatgcacttggaaagagaagctgttgagaaagagttgtta
gagaaagttaaacatcttgagagtcaattagcaaaaagtcataccatggaatctgccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagctaag
tttctagaacaacttgaagagcaggagaaaaggaagaatgaagagatgcagaatgttcga
acatctttgatcgctgagcagcagaccaattttaacactgttttaacaagagagaaaatg
aggaaagaaaacataatcaatgatctcagtgataagctcaagagcacaatgcagcagcag
gagcgggacaaagatttgatcgagtccctgtctgaggaccgcgcacgtctgctggaggag
aagaagcgactggaggaggaggtcagccggctgcggggcagtgccttcgtgccctccccg
ggtgtggctgcagcccccgagttgtacggggcctgtgcacctgagcccccgctggaggcc
ctggacacccttggtgaggggaggccagactcagccatggagaccagcacgatgtctgtc
caagaaaacgtccacgtgctctctgaagaaagacagcggataatgctgttggaacgaaca
ctacagttgaaagaagaagaaaacaagcggttaaatcagagactgatgtctcagagcatg
tcttccgtgtcctcgaggcattctgagaagatagccattagagatttccaggtgggcgac
ctggtgctcatcatcttggacgagcgccacgacaactacgtgctcttcacagtgagcccc
accctgtacttcctgcacgcggagtccctgcccgccctggacctcaggccgggagagggc
gcttcaggtgcatctcgaagaccgtgggtacttggaaaagtgatggaaaaggagtactgc
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
