Oryx dammah (scimitar-horned oryx): 120878885
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Entry
120878885 CDS
T07255
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120878885 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oda01002
]
120878885 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120878885 (TAF2)
03036 Chromosome and associated proteins [BR:
oda03036
]
120878885 (TAF2)
Peptidases and inhibitors [BR:
oda01002
]
Metallo peptidases
Family M1
120878885 (TAF2)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120878885 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
120878885 (TAF2)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120878885 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
120878885
NCBI-ProteinID:
XP_040117718
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MPPTGSDPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYTLTI
PTSASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSVKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMAVLRRADSEQADFMWQYQLRYERDVV
AQQEAIAALERFPTPASRLALTDVLEQEQCFYRVRMAACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPSLFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKSMESPLCNEALVDQLWKLMNSG
TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAIAGNQEA
AVNPSSHAQLAGFQNPEDDHLAKEASCTMSAHQQGVKRKADTPLGSPLEPGQILEKNEDS
SKVRLRIRFSSSQEEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPANSRSALIPQ
HSAGCDGTPTTKPQWNMELPRKGTGIHLSVSHLEGKEQPPLEMSVHPAAAAPLSVFGKEP
ASSKHSEHHHHHHHEHKKKKKKRKHKHKHKHKRDGRERGRGPLAFPSPAGGRSARSPSLS
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgactggctctgaccccgccagaatgaacaggaagaaaggagacaagggcttt
gaaagcccaaggccgtataaattaacccatcaggtcgtctgcatcaacaacataaacttc
cagagaaaatctgttgtgggatttgtggaactgactatatttcccacagttgcaaactta
aatagaatcaagttgaacagcaagcaatgtagaatataccgagtgaggatcaatgactta
gaagctgcctttatttataatgatccaaccttggaagtttgtcacagtgaatcgaaacag
agaaatctcaattacttctccaacgcttacgcggctgcggtgagcgctgtggatcctgat
gcagggaatggggagctgtgcattaaggttccgtcagagctgtggaaacatgtcgatgag
ttaaaggtcctaaagatacacatcaatttttctttggatcagccaaaaggaggtctgcat
ttcgtggtacccagtgtagagggaagcatggcagagagaggtgctcatgtgttctcttgt
gggtatcagaactccacaagattttggttcccatgtgtcgattcatactctgagttatgt
acgtggaaattagagtttacagtggatgctgccatggtggcggtttctaacggagatttg
gtggagaccgtgtatacccatgacatgaggaagaagaccttccactacacgcttaccatc
ccaacatctgcatcgaacatctccttggccattggaccttttgaaatcctcgtagatcca
tatatgcacgaggttactcatttttgtttacctcaacttctgccattgcttaaacatacc
acatcatatcttcatgaagtttttgaattttatgaagaaattcttacatgtcgataccca
tattcctgttttaagacggtattcattgatgaagcttatgttgaagtggctgcttatgct
tccatgagcatttttagcacgaatctgctgcacagtgctatgattatagatgagacacct
ttgaccagaaggtgtttagcccagtctttggcccagcagttttttggatgtttcatatcc
agaatgtcttggtctgatgaatgggtattgaaaggaatttccggttatatttatggtctc
tggatgaaaaaaacttttggtgttaatgaataccgccactggattaaagaggagctggac
aaaatagtggcgtatgaactaaaaactggtggagttttattacatcccatatttggtgga
ggaaaagagaaggataacccagcgtcccatctgcacttctccgtgaagcacccgcacacg
ctctcctgggagtactacaccatgttccagtgtaaggctcacctggtgatgaggctgatt
gagaacaggatcagcatggagtttatgctgcaggttttcaataaactgctaagtttggct
agtactgcttcatctcagaagttccagtcacatatgtggagtcagatgttggtttccaca
tctggatttttgaaatccatctcaaacgtctctggcaaagacatccagcctttaataaag
cagtgggtagaccagagtggagtggtaaaattttacggaagttttgcctttaatagaaag
cgaaatgtcttggaactggaaataaaacaagattatacatctcctggaacccagaaatat
gtgggaccacttaaagtgacagtacaggaattagatggatccttcaatcatacattgcaa
attgaagaaaacagccttaaacatgatataccttgccattccaaaagcagaaggaataag
aagaaaaaaatcccactgatgaacggtgaagaagttgacatggacctttctgcaatggac
gccgactccccgctgctgtggatccggatcgacccggacatggcggtgctgcggcgggcg
gactcggagcaggcggacttcatgtggcagtaccagctccgctacgagcgggacgtggtc
gcgcagcaggaggccatcgcggccctggagcgcttccccacccccgcgtcccggctcgcc
ctcaccgacgtcctggaacaggagcagtgtttctaccgcgtgcgcatggccgcctgcttc
tgcctcgcaaagattgcaaattcaatggtgagcacgtggacaggaccaccagctatgaag
tcactctttactaggatgttttgttgtaaaacttgtccaaacattgtgaaaacaaacaac
tttatgagctttcaaagttactttctacagaagactatgccagttgcaatggccttattg
agagatgttcacaacctttgtcccaaagaagtcttaacatttattttagacttaatcaag
tacaatgacaacagaaaaaataagttttcagataactattatcgtgcagagatgattgat
gcccttgccaactctgttacgcctgcagtcagcgtgaataacgaagtccgaactttggat
aacttaaatccggacgtgcgactcattcttgaagaaatcactaggtttttgaacatggaa
aaacttctcccaagttacagacacaccatcaccgtcagctgtctgagagccatccgagtg
ctgcagaagaacggccatgtgcccagcgacccgtctctctttaagtcttacgcagagtat
ggccactttgtggacatcagaatagcagctttggaagcggtggtcgattacactaaagtg
gacaggagttatgaagaattgcagtggctacttaacatgattcagaatgaccctgtaccc
tatgtaagacataaaattctaaatatgttgactaaaaacccaccctttactaagagcatg
gagtctcccttatgcaatgaagctttggtagatcaactttggaaacttatgaattctggc
acttcacacgactggaggctgcggtgtggggctgtggacttgtacttcacgctttttggc
ctcagtagaccttcctgcttacccttgccagaacttggcttggtccttaatttgaaagag
aaaaaagctgtcttgaatccaaccatcattccagaggccatagcaggcaaccaagaagct
gcagtgaacccaagcagccacgcacagctagctggattccagaaccctgaagatgatcac
cttgccaaggaagcctcatgtactatgtcagctcatcagcagggagtgaagaggaaggct
gacacgccactggggtccccactagagcctggccaaatactggagaagaatgaggatagc
agtaaagtcagactcagaatcagattttcaagttctcaagaggaagaagagattgatatg
gatactgttcatgatagccaggcattcatttcccatcatttaaacatgcttgaaaggccg
tcaactccagggctctccaagtatcggccagctaactcgcgatctgctctgataccccag
cactcagcaggctgtgatggcacgcccaccacgaagccccagtggaatatggagctccca
cggaagggaacaggaattcatttgagtgtttctcaccttgaaggtaaagagcagccccct
ctggagatgagtgtgcatccggccgcggctgctccgctgtcggtgtttggcaaggagccc
gcgtcctccaagcacagcgagcaccaccaccaccaccaccacgagcacaagaagaagaag
aagaagcgcaagcacaagcacaagcacaagcacaagcgggacggccgggagcggggccgg
gggccactcgccttccccagccccgccggcggcaggtccgcgcgctccccgtccctgtca
gactga
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integrated database retrieval system
