Oryx dammah (scimitar-horned oryx): 120879611
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Entry
120879611 CDS
T07255
Symbol
BDP1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120879611 (BDP1)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120879611 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120879611
NCBI-ProteinID:
XP_040118589
LinkDB
All DBs
Position
Unknown
AA seq
2627 aa
AA seq
DB search
MFRRARLSVKPNVRPGAGARASTAPNSQRDQEAPRPQEPAAASAPKPAESTDVPPVDFGE
AEPQDKTPKNSVEKTDDGKDVEESSKPSFTVSQKRKRIPSTSSLVRPSVSVPSEPHPLST
VNQEAPQPNPVPTKEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYAVNETQRPPD
RSKMTMRDFIYYLPESNPMTSSLEQEKKTEKSSTPVRTREQESKTTPDGEDNEEVEEELD
DGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKSYY
SKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEK
RPFDFDFFAHLLQKVLAEEEKRKQKSVKNQSSKEKKSSKSRKNVKVKKVANDRDESVSTN
ISNPGRSQKDAQTVEEELQSLTLSEQDSEQNALELDINQKKRRRKNQGEGSEQEVHLSGS
ATVQPGSSKGEKHKNKGLSLSPEVNEDESSKEQELPCVQDTDDLVGLSSSEDAEKRADPI
LPSSQQDVISVATETAESNTSDLPSSEGGVRALCEVNSAESSCTEERDVDLKDKSLETDQ
TETIKPMTRGRLQRPKPNLSRAVGKKSVLSQGKTDAEDKSLHKETPVDKSPMEKDGISGM
ENTEKGNREPDTVSNLSEKTCLQEDDQPKAFRPARPMRGLLQRPKPNVGKAAERKGTLTS
QGKPGASIEKNENESCINRNTPEQIEDQSCENFECEDIASLPEKKDSSFQNVQSDEPKAV
NECLSIQEDNRGNKDVRIPKTRFQKPKPNIGRRTGRRGISSKEEVPKEVIASEEMTAALR
ETAALETSLREKEPVETNTTKEMESDLKEIGRKDISSRDITPEMGDVTVEMETDLKETEK
NDISPREKMPEISDVTVEMKTDLKETEKNDISPMEKIPEMIAVIAEMETDLKETGKNDIS
PREKMPEMSDVTAEMETDLKETEKYDISPREKMPEMSPVIADMETDLKETGKNDISPKER
VPEMIDVTAEMGTDLKETIKNDISPKEKIPEMIMSLQKXXXXMGTDLKETGKNDISPKEK
IPEMIDVTVEVETDSKETGKNDISAREKMPEMSDVTAEMETDLKETRREIFPRKEITVVT
EATEERKTDLEETERREMSLEENAPEEVDTVCEVETDLKKTEREISPNEEIAEMPDAAEE
VETDLEETDRREISIQKNASEVKTVGDEMDIDLKEIGIEISPREKILVGISATGERETDV
EETGQTDIFLLEKASAKVAAIGEIEADLKDTGKEISLTESRSEEIEKSVTALKNIEKIDI
SVREKEPEETGTSSQAEADPLQASSGDSSTVPSLTNRDLGREVLSAVVHTSVEEKNSEKE
VSSQLSHLNISSQSSELDKIEDQRMRPPSVPEQFSDVNISKSLPQEQTPCEVKLTPFVRS
RFKRPKPNLARAASKRETTKAEKHAPGKEVEADKTEMVVIQQNCEQMSTLPSQHDVASLM
TSREKDKFDHGPEETVILPCVQIEKDLSPLSSCESKEESQSTQAQEKKLLVSMGTHNINT
FEQGIKDRVIQSAPLVRGRLQRPRPNLRKVGQRQVIEKNETKETTKEEKTLQKDETGEKF
LTAPNSQIATEIEVVSSEVSEGRMSENQSHVLLENVHINKVDVLDEKMRHGHETYVPSPP
QMIRRQFQRAKPDLGRAQSKKEASDIEEDRADQRKARKPEDSLSQHEDSDSQLLQKGKPE
FLTSLEVSARKDSVDSKETELAKKDAQSEVEPSGSVAEKTGEDNSVCAVAEKQCISKPSS
PQLLKEPDNSKTALDRRRALSSASEREIDHSRRRVRRKVKPSIPKGRGSKRSRSKTSKKE
PRASRSVLVTLRASQEEDEDDGEDFESDYEEESYHLAPEEVNKAPVFVPIGLRSPEPVPV
QIEETMEELVIPTNVTDVGCITVVEHQLSSNIDVIPQEMRQEENLNTLSVEMTIGEHSQA
ETESTNDGSTEAAITLLTMGDLVLQSEISPEQSDGLCLLPDAHSIDQSRIPFSPDNVNLK
IVHECQEPSSPGHSTSPSVEQNKIVLDVDKQNTKEEIGLTEVKENTTSSRTTTSEVTNNL
RNRGRFAKPKPNLKKILGTKRFGAHQKVPSLFVTKEEVEIQTETEKNASQETELEDKNLE
SVTATESTEQSKVASAHGVEETSVSQETHLTERGEDQEGRSEEVPISSVAPAVSSESGPH
TGGLGMGLGESSVEEPLGKDLNGDPGLTLNVPECIPTSIPEVQQENINDLQDITVNLVNV
HQDGEDEQTFILTLVEIPEEYADSTMQLMPNPLLPAPILVKSVNTKEREDTSISFPVTSV
GQDDMCLSNSERDDSEKSAANLNLVSRKRYYCSVDESDHVPPAKKTSLTSIDDCQKYTSE
VCSKELKNVLEETGESYKGQDIFPTSGNIQTISEPQKEQLEPTSQSIRSGSLDKITDTQE
KDASQLPQDEIMVSDKEERTCAASESEQMGSITSSSKPPLTRPGRRPLGFLSLLCSKNSL
DSEEPTQVHSKKRLKPVIPVSRQNLKRSNLPSVSQKKTQESSDVPSPSVVDNTQHTNNTS
STTQVSHNRPLPKGECKRGQNRVPEEEPTTVSEYFFNDIFIEVDETE
NT seq
7884 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcagggcacgccttagcgtgaagccgaatgtcaggcccggggcaggcgccagg
gcctccaccgcccccaattcccagcgtgaccaagaggctccaaggccgcaggagcctgcc
gcggcctctgctccgaagccagcggaatccacagatgtgcccccggtggatttcggggaa
gcggagccccaagacaagactcccaagaacagtgttgaaaagactgatgatgggaaggat
gttgaagaatccagtaagccttcctttactgtttcacagaaaagaaagcgaataccaagt
acttctagtctggtcagacctagtgtcagtgttccttcagaacctcatcctttatctaca
gttaatcaagaagctccacagccaaaccctgttccaacaaaagagaaacagccatgttca
gacagataccgaatatacaaagcccagaaactgagggaaatgttaaaagaagaattgagg
aaagagaagaagcaatggaaaaacaagtatgccgtaaatgaaactcagaggccaccggat
cgttccaaaatgactatgagagacttcatatattatcttccagagagcaatccaatgact
tcttcgctggagcaggaaaagaaaactgaaaagtcatcgacaccagtccgaacacgagag
caagaaagcaagactactcctgatggtgaagataacgaagaagtggaagaagagctggat
gatgggcccttgctggttcctcgagtaaaagtggcagaagatggttctattattttggat
gaagaaagtttaactgtagaagttttaaggacaaaaggtccctgtgttgttgaggaaaat
gaccccatatttgagcgtggttctacaactacatattccagctttaggaaaagctactac
tctaaaccatggtcaaataaagagacagatatgttttttttagccatcagcatggtagga
actgacttttctatgattggacagctttttcctcacagagcaagaatagaaattaagaat
aaatttaaacgtgaagagaaaacaaatggatggagaatagacaaagcattccaggaaaag
cgcccttttgacttcgatttttttgctcatttgcttcagaaagttcttgccgaagaagag
aaaagaaaacaaaaatctgttaaaaatcagagttcaaaggagaagaagtcctctaaatca
cggaaaaatgtaaaagtgaaaaaagttgctaatgatcgagatgagtctgtaagcactaac
atttcaaacccaggaaggtcgcaaaaggatgctcagacagttgaagaagagctgcagtct
ctgactttatctgaacaggattcagaacagaatgcattagaactagacataaatcaaaag
aaaagaagaagaaagaatcagggtgaaggtagtgaacaagaagtgcatctttcaggaagt
gccactgttcagccaggctcttctaaaggagaaaaacacaaaaataaaggcctgtcttta
agtcctgaggttaatgaagatgaatccagtaaggaacaagagctcccctgtgttcaggac
acagatgaccttgtgggtttatcctctagtgaagacgctgagaaaagagctgaccctatt
cttccatcaagtcaacaagatgtcatatcagtagcaactgagactgcagaatcaaacact
tcagacttgccttcatcagaaggtggagttagagcattgtgtgaggtgaatagtgctgag
agtagttgtacagaagaaagagatgttgacctaaaagataaatcactggaaactgatcaa
acagaaactattaaaccaatgacaagaggacgactccagagacctaaacccaatttatca
agggcagttgggaagaaatcagttctttctcaaggtaaaacagatgcagaggacaagagt
ttacataaagaaactcctgttgacaagagtcccatggaaaaggatggtatttctggaatg
gaaaatacagagaaagggaaccgagaacccgacactgtatctaatttgagtgaaaaaact
tgtctgcaggaagatgatcaaccaaaggctttcagacctgcacgaccaatgcggggctta
ttacaaaggccaaaaccaaatgtagggaaagctgctgaaagaaaaggaactcttacatca
cagggaaaacctggtgccagtatagaaaagaatgaaaatgaatcctgtatcaacagaaat
actcctgaacagatagaagatcaatcatgtgaaaattttgagtgtgaagatattgcatca
ctacctgaaaaaaaagacagttcctttcaaaatgtgcagtcagatgagcccaaggctgtt
aatgaatgtctgagtattcaggaggataatagaggaaataaagatgttcgaattccaaag
actcgatttcagaaaccaaagccaaatatagggaggagaactggaagaagaggaatttcc
tcaaaggaagaggtaccaaaggaggtaattgcctctgaggagatgacagcagctttgaga
gaaacggcagcactggaaacctcactaagggagaaggaacctgtggagactaatactact
aaggaaatggagtcagatttaaaagaaattggaagaaaagacatctcttccagggatata
acgccagaaatgggtgatgtcactgtggaaatggagacagatttgaaagaaactgaaaaa
aatgacatctctcccagggaaaaaatgccagaaataagtgacgtcactgtggaaatgaag
actgatttgaaagaaaccgaaaaaaatgacatctctcccatggagaagataccagaaatg
attgctgtcattgcagaaatggaaacagatttgaaagaaactggaaaaaatgacatctct
cccagggagaaaatgccagaaatgagtgatgtcactgcagaaatggagacagatttgaaa
gaaactgaaaaatatgacatctctcccagggagaaaatgccagaaatgagtcctgtcatt
gcagacatggagacagatttgaaagaaaccggaaaaaatgacatctctcccaaggagaga
gtaccagaaatgattgatgtcactgcagaaatggggacagatttgaaagaaaccataaaa
aatgacatctctcccaaggagaaaataccagaaatgattatgtcactgcagaaatnnnnn
nnnnnaatggggacagatttgaaagaaaccgggaaaaatgacatctctcccaaggagaaa
ataccagaaatgattgatgtcactgtggaagtagagacagattcgaaagaaactggaaaa
aatgacatttctgccagggagaaaatgccagaaatgagtgatgtcactgcagaaatggag
acagatttgaaagaaaccagaagagagattttcccaaggaaggagataacagtggtgact
gaggccactgaggaaagaaagacagatttggaagagactgaaagaagagaaatgtcccta
gaggaaaatgccccagaggaagttgataccgtttgtgaggtagaaacagatttgaaaaaa
actgagagagaaatttccccaaatgaggagatagcagagatgcctgatgctgctgaggaa
gtagagacagatctagaagaaactgatagaagagaaatatctatacaaaaaaatgcctca
gaggtcaaaactgtaggtgacgaaatggatatagatttgaaagaaattggaatagaaatt
tccccaagggaaaagatattagtggggatcagtgccacaggggaaagagagactgatgtg
gaagaaactgggcagacagacattttcctgctggagaaagcatcagcaaaggtggctgcc
attggggaaatagaggcagatttgaaagacactggaaaagaaatttccttgacggaaagc
agatcagaagagatcgagaaaagcgtgacagctttgaaaaacatagaaaaaatagacatt
tccgtaagggaaaaagaaccagaggagactgggacctcaagtcaagctgaggcagatccc
ttgcaggccagcagtggtgactccagcactgtgccttcactgactaatagagacttgggc
agggaagtgctatctgctgtggttcatacatctgtagaagaaaaaaattctgaaaaggaa
gtgtcaagtcagttgagtcatttgaacatttcttctcagtcttctgaacttgataaaata
gaagaccagaggatgcgacctccaagtgttccagagcagttttcagatgttaatataagc
aaatctcttcctcaagaacagacaccatgtgaagttaagctgacaccctttgtgagaagt
agattcaaaagacctaaaccaaacttagcaagagcagcttcaaaaagagagactacgaaa
gcagaaaagcatgcacctgggaaggaggtggaagctgataaaacagagatggttgtgata
cagcagaactgtgaacagatgagtactctcccttctcaacatgatgtggcttctctaatg
acatcaagagaaaaagacaaatttgatcacggcccagaggagactgtgatattaccatgt
gtgcagattgaaaaggacctttcacctttgagttcttgtgaatctaaagaggagtctcag
tctacacaagcccaggaaaagaaattacttgtctctatggggactcataatataaacact
tttgaacaaggaataaaggacagggttatccaatctgctccactagtaaggggtcgactt
cagagacccagaccaaacttaagaaaagtgggccagaggcaagtaatagaaaaaaatgaa
accaaagaaacaactaaggaagaaaagactctacaaaaagatgaaactggagagaaattc
ctgactgcgccaaattctcaaattgcaactgaaattgaagttgtatcctctgaagtgtca
gaaggcagaatgtctgaaaaccagagccacgttcttttagaaaacgttcatattaacaaa
gtagatgttttagatgaaaagatgagacatggacatgaaacgtatgttcctagtccacca
cagatgataagaagacagttccaaagggctaagccagatttgggaagagcacaaagtaag
aaagaagcatcagacatagaagaagacagagcagaccagaggaaggcaaggaagccagaa
gatagtttgtcgcagcatgaagattctgacagccagcttcttcaaaaaggaaaacctgag
tttctgacatctctggaggtttcagcaagaaaagattctgtagattccaaggagactgaa
ttggcaaaaaaagatgctcagtcagaagttgaaccatctggaagtgttgcagagaagact
ggagaggataattctgtgtgtgcggttgctgaaaagcagtgtatcagtaaaccaagctcc
cctcaattgttaaaagaaccagataactctaaaactgctctggatcgaagaagagcgctc
tcttctgcctctgagcgtgagatagatcatagtagaaggagagtacgtcgaaaggttaaa
ccgagcatccccaaagggcgtggctcaaaacgaagtcggagtaagacttctaagaaggaa
cccagagcctccaggtctgtgctggtgactcttcgagcttcccaggaagaagacgaagat
gatggtgaagactttgagtctgactatgaagaagaaagctatcatcttgctcctgaagaa
gtaaacaaagctccagtgttcgtacctattggtctcagatctcccgaacctgttcctgtt
cagattgaagaaactatggaagagcttgtaatccccacgaatgtcacagatgtaggatgc
ataactgttgtggaacatcaactttcgtcaaacatagacgtgattcctcaagaaatgaga
caagaagaaaatttgaatacattatcagttgaaatgaccataggtgaacattcccaagct
gaaacagaaagtaccaacgatgggagcactgaggctgccataaccctactgactatggga
gatctggtgttgcagtcagagattagcccagaacagagtgatggactatgtttacttcct
gatgctcattcaatcgatcaaagccgtattccttttagcccagataatgtaaatctcaaa
attgttcatgaatgtcaagaaccttcttcacctggccatagtacatctccatcagtagaa
caaaacaagattgtattggatgtggataaacagaatactaaagaagaaattggtttgaca
gaagtaaaggaaaatactacatcatccaggactacaacttctgaagtgaccaataatttg
agaaatagaggtagatttgccaaacccaagccaaatcttaagaagattttagggaccaag
agatttggtgctcatcagaaagttcctagtttgtttgtaactaaagaagaagtggaaatt
caaacagaaactgagaaaaatgcttctcaagaaacagaattagaagataaaaacctagag
tcggttacagcaacagagagtacagagcagagcaaagtggcatctgcacatggtgttgaa
gagaccagtgtttcacaagaaacacacctaactgaaagaggtgaagatcaagaagggaga
tctgaagaagttccgatatcatcagttgctccagctgtctcttctgagtcagggccccac
acaggcggtttgggcatgggtcttggtgagagttctgttgaagagcctctgggaaaggac
ttgaatggagatcctgggcttacactaaatgtgccagagtgtataccaactagtattcca
gaagtccagcaagagaatataaacgatcttcaagacataacagtcaatctagttaatgta
catcaggatggtgaggatgaacaaactttcatcttaactctggtggaaatcccagaagag
tatgctgatagcactatgcagttaatgccaaatcctttactgccggcgcccatattggtc
aaatcagtgaatacaaaggaaagagaagacacgagtatcagttttccagtaacttcagtt
ggtcaagatgatatgtgtttatctaattctgaaagagatgattcagaaaagtctgctgct
aatttgaatcttgtatctaggaagagatattactgtagcgttgatgaaagtgaccatgtc
cctcctgccaaaaaaacgtcactcacttcaatagacgactgtcaaaaatatacctctgag
gtgtgttcaaaggaattaaaaaatgttttggaggaaacaggggagtcttacaagggacag
gatatcttccctacctcaggaaacatacagacaatttcagaacctcagaaagagcaactt
gaaccaacttctcagagtatcagatctggatctcttgataaaataacagatacacaagaa
aaggatgcatctcagttacctcaggatgagataatggtgtctgataaggaagaaagaaca
tgtgctgcttctgagtctgaacaaatgggcagcatcacatcgtcttcgaaaccccctcta
accagacctggcagaagacccctgggatttttgtctttactatgttcaaagaatagcttg
gactctgaggaacctacacaggttcatagtaagaaacgcctaaagcctgttatacctgta
tcaagacaaaatttgaaaagatctaatctgcctagtgtaagccagaaaaaaactcaagag
tcctctgatgttccatctccaagtgttgttgacaatactcaacatacgaataatactagt
tcaacaactcaggtttctcataatcgtcccttaccgaaaggagaatgtaaacgtggccaa
aaccgggtacctgaagaggagccaaccacagtctctgaatatttctttaacgatatcttt
attgaagtggatgaaacagaatag
DBGET
integrated database retrieval system
