Oryx dammah (scimitar-horned oryx): 120880135
Help
Entry
120880135 CDS
T07255
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oda03036
]
120880135 (CHD5)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120880135 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
120880135
NCBI-ProteinID:
XP_040119206
LinkDB
All DBs
Position
Unknown
AA seq
1954 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLEGFDDFFPEEPVSLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDDEE
DDNEDGCLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKATGLKFRFGGVGSKRKRGSSSEEDEREESD
FDSASIHSSSMRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEDEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVDPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDSLKQAYWGHRELMLGEDTRLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPATPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEAISSDPNTPLPASPAHLLP
GPLGLPDKMEAPLGYMDEKEVGVQKPKKPPEIQALPTALDRVEGEDKQESSDGKERAREE
RLEEMEKAQPSPEQLPKEEVLPEKEKVLDKLELSLIHSRGDSSDFRPDDTKAEEKEPVET
QQNGDKEEDEEGKKEDKIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYNNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttgaaggcttcgatgactttttc
ccggaggagcccgtgagcctccccaagaagaaaaagtccaagaagctcaaggagaacagg
tccaaagggaagaggaagaagaaagaggggagcaatgacgagctgtcagaaaatgaagag
gatctggaagagaagtcggagagtgaaggtagtgactactccccaaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagctaaacggaaaaagaaagatgatgaggag
gatgacaatgaagatgggtgcctcaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggacgacgtggactacctgttctccgaggccgactaccacacactgaccaac
tacaaagccttcagccagttcctcagaccgctcatcgccaagaagaacccgaagatcccc
atgtcaaagatgatgactgtcctgggtgccaagtggcgggaattcagtgccaacaacccc
ttcaagggcagctcggcggcagcggccgcagcagcagtggctgcagccgtggagacggtc
accattgcacctcccctggctatcagcccccagcaggcaccccagcctgtgcccatccgc
aaggccaagaccaaagagggcaaggggcctggggtgaggaagaagatcaagggctccaag
gatgcgaagaaaaagggaaaagggagaaaggcgactgggctcaagttccgcttcggaggg
gtcggcagcaagaggaagagggggtcctcgagcgaggaggatgagcgagaggagtcggac
ttcgacagcgccagcatccacagctcctccatgcgctccgagtgctctgctgccctgggg
aagaagagcaagaggaggcgcaagaagaagagaatcgatgatggcgatggctatgagaca
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcattctgtgtgacacc
tgcccgagggcctaccacctcgtctgtctggaccccgagctggagaaagctcctgagggc
aagtggagctgtccccactgtgagaaggaagggatccagtgggagccgaaggacgacgac
gacgacgaggacgagggcgggtgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcttcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagcggatcctgcactggcggtggacagagccc
ccagcccccttcatggtggggctgccggggcctgacgtggaccctggtgtacccccgccc
aagcccctggagggcatcccggagagagagttcttcgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctccagctggagctctaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggatgaaccgccgccctttgactatggctctggcgac
gaggacggcaagagcgagaagaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcctgagtggatgatgatccaccgcatcctgaaccac
agcttcgataaaaagggagacgtacattacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggagattgacgaaattgacatcccctactacgacagcctgaagcaggcc
tactggggccacagggagctgatgctgggagaggacaccaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggatgacaaacaggagaagcccccggacacacccattgtg
gatcccacggtcaagtttgacaaacagccatggtacatcgactccacgggtggcacgctg
cacccgtaccagctggagggccttaactggctgcgcttctcctgggcccagggcaccgac
accatcctggctgacgagatgggtctgggcaagactgtgcagaccattgtcttcctctat
tccctgtacaaggaggggcactccaaaggaccctacctggtcagtgcacccctgtccacc
atcatcaactgggaacgtgagttcgagatgtgggcccctgacttctacgtggtcacttac
acgggggacaaggagagccgctctgtgatcagggagaatgagttttcctttgaggacaat
gccattcggagtgggaagaaggtgttccggatgaagaaagaagtacagatcaaattccac
gtccttctcacctcctatgagcttatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggatgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattataagctgctgctgacagggaccccccttcag
aacaacctggaagaactgttccacctcctcaacttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaagaccagatcaagaagctg
catgacctgctggggccgcacatgctgaggcggctcaaggctgacgtgttcaagaacatg
ccggcgaagactgagctgattgtccgcgtggagttgagccagatgcagaagaagtactac
aagttcatcctcacacggaactttgaggcgctgaactccaaggggggtgggaaccaggtg
tcactgcttaacatcatgatggacctgaagaagtgctgcaaccacccttacctcttccct
gtggctgctgtggaggcccccgtcctgcccaatggctcctatgatggcagctctctggtc
aagtcttcagggaagctcatgctgctacagaagatgctcaagaaactgcgggacgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggaagacttcctg
gagtatgagggctacaagtatgagcggattgatggtggcatcacggggggccttcggcaa
gaagcaattgacagattcaatgcccctggggcccagcagttctgcttcctcctttcgacc
cgggcaggtggcctggggatcaacctggccacggcggacacggtcatcatctacgactcg
gactggaacccacacaatgacatccaggccttcagccgtgcccaccgcattgggcagaac
aagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcgacctggcctgggctccaag
tctggctccatgaccaagcaggagctggatgacatcctcaagtttggcacagaggagctc
ttcaaggatgacgtggagggtatgatgtctcagggccagagacccgccacgcccatccct
gatgtccagtcctccaaagggggagccttggctgccagcgccaagaaaaagcatggcagc
actccaccaggtgacaacaaggacgtggaggatagcagtgtgatccactatgacgatgct
gccatctccaagctgctggaccggaaccaggatgccacggacgacacggagctccagaac
atgaatgaatacctgagctccttcaaggtggcgcagtatgtggtgcgcgaggaggatggc
gtggaggaggtggaacgggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagacaaccagtctgaatattccattggctctgaggatgaggac
gaggactttgaggaaaggccggaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcctctgccccctcttcttgcccgggtcggcggcaacattgag
gtgctaggcttcaacgcccgccagcggaaggcctttttgaacgccatcatgcgctggggc
atgcccccccaggatgccttcaactcccactggctggtgcgggaccttcgtgggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcggagacctttgcggacggcgtgccccgcgagggcctctccaggcagcacgtg
ctcacgcgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtc
aacgggaagtacagcaccccggatctgatccctgaggggcctgagggcaagaagccgggc
gaagccatctcctcggatcccaacacaccattgcccgccagccctgcccacctcctgcct
ggccctctgggcctgccagacaaaatggaagccccactaggctacatggatgagaaggag
gtgggggtgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggac
agagtggagggagaggacaagcaggagagctccgatggcaaggagagggcccgagaggag
cgactggaggagatggagaaggcccagccctccccggagcagctgccgaaagaagaagtg
cttcctgagaaagagaaggttctggacaagctggaactgagcttgattcacagcaggggc
gacagcagtgacttcaggccagatgacaccaaagctgaggagaaggagcctgttgagacc
cagcaaaatggtgacaaagaggaagacgaagaggggaagaaggaggacaagatcgggaag
ttcaagtttatgttcaacattgcagacgggggattcacagagctgcacacactgtggcag
aacgaggagcgtgccgctgtgtcctcggggaaaatctacgacatctggcaccggcgccac
gactactggctgctggcaggcatcgtcacgcacggctatgcccgctggcaggacatccag
aacgacccgagatacatgatcctcaatgagcccttcaagtctgagatccacaagggcaac
tacctggagatgaagaacaagttcctggcccgcaggttcaagctgctggagcaggcgctg
gtcattgaggaacagctccggagggccgcatacctcaacatgacccaggaccccaaccat
cccgccatggccctcaacgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtctctcgcgggaaacaagcctgccaatgctgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggcggacgtgacgcgcctcccctcc
atgctgtcccgcatccccccggtggccgcccgcctccagatgtcggagcgcagcatcctg
agccgcctgaccaaccgagccggcgaccccaccatccagcagggcgctttcggctcctcc
cagatgtacaacaacaactttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccgatatctag
DBGET
integrated database retrieval system
